mRNA_D-mesarthrocarpus_Contig10215.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: D7G5I9_ECTSI (Zeaxanthin epoxidase, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I9_ECTSI) HSP 1 Score: 185 bits (470), Expect = 5.650e-54 Identity = 84/101 (83.17%), Postives = 95/101 (94.06%), Query Frame = 1 Query: 1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
VEQRDLYDRPPS+TKSWAQGN VLIGDACHPMMPNLGQGGCQAMEDG++LTN+LK VT RS+IP TL+ FYRSR++RTS++QGLSRIASDLIV+ FDTPMK
Sbjct: 376 VEQRDLYDRPPSLTKSWAQGNAVLIGDACHPMMPNLGQGGCQAMEDGYILTNMLKDVTHRSQIPETLESFYRSRIIRTSVVQGLSRIASDLIVKNFDTPMK 476
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A835YX74_9STRA (Zeaxanthin epoxidase chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX74_9STRA) HSP 1 Score: 169 bits (427), Expect = 8.110e-48 Identity = 77/101 (76.24%), Postives = 90/101 (89.11%), Query Frame = 1 Query: 1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
VEQRDLYDR PSV +SW+ G+ L+GDACHPMMPNLGQGGCQAMEDG+VLTN+LK VT RSEIPSTLQ +YR+R+ RT+I+QGLSRIASDLI+ QFDTP +
Sbjct: 359 VEQRDLYDRRPSVMRSWSDGHVTLMGDACHPMMPNLGQGGCQAMEDGYVLTNMLKEVTRRSEIPSTLQKYYRTRIARTAIVQGLSRIASDLIINQFDTPAR 459
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A7S3RBA5_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RBA5_9SPIT) HSP 1 Score: 148 bits (374), Expect = 3.090e-43 Identity = 67/101 (66.34%), Postives = 79/101 (78.22%), Query Frame = 1 Query: 1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
+E R LYDRPPS+TKSWA G L+GDACHPMMPNLGQGGCQAMEDGF + LK T+RS++P LQ +YRSR++R S IQGLSRIASDL++ F P K
Sbjct: 1 IEDRSLYDRPPSLTKSWADGPVALLGDACHPMMPNLGQGGCQAMEDGFAIFERLKTATNRSQVPDMLQDYYRSRIVRASAIQGLSRIASDLLLSTFTFPWK 101
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A813JPE6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JPE6_POLGL) HSP 1 Score: 145 bits (366), Expect = 1.310e-40 Identity = 68/101 (67.33%), Postives = 76/101 (75.25%), Query Frame = 1 Query: 1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
VE R LYDRPPSV +SWA G L GDACHPMMPNLGQGGCQAMED +++ LKG SRSE+P LQ +YRSRV R S IQGLSRIASDL++ F P K
Sbjct: 124 VEDRSLYDRPPSVGRSWADGPVALAGDACHPMMPNLGQGGCQAMEDAYMICEKLKGCKSRSEVPDALQDYYRSRVFRASAIQGLSRIASDLLLSTFTFPWK 224
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A7S1FQ78_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FQ78_9STRA) HSP 1 Score: 141 bits (356), Expect = 3.130e-40 Identity = 65/99 (65.66%), Postives = 79/99 (79.80%), Query Frame = 1 Query: 1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTP 297
VEQRDLYDR P + +SWA+GN VL+GDA HPMMPNLGQGGCQA+ED FVLT +L S +I +LQ FYR+R++R SI+Q LSR+ASDLI+ FDTP
Sbjct: 29 VEQRDLYDRSPELLRSWAKGNVVLMGDAVHPMMPNLGQGGCQAIEDAFVLTKILDETKSTDKIQDSLQEFYRTRILRVSIVQFLSRLASDLIINAFDTP 127
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: L1JNY8_GUITC (Zeaxanthin epoxidase, plastid-targeted n=5 Tax=Guillardia theta TaxID=55529 RepID=L1JNY8_GUITC) HSP 1 Score: 147 bits (371), Expect = 1.080e-39 Identity = 67/101 (66.34%), Postives = 82/101 (81.19%), Query Frame = 1 Query: 1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
+EQRDL+DRPPSVTKSW++G+ +IGDA HPMMPNLGQGGCQA+ED +VL+ +L V R +IP L+ FY R+ RTS+IQGLSRIASDLIV FDTP +
Sbjct: 359 IEQRDLFDRPPSVTKSWSKGHVTMIGDAVHPMMPNLGQGGCQAIEDAYVLSEILGTVEKREDIPGALRSFYFKRLPRTSVIQGLSRIASDLIVSAFDTPFQ 459
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A7S0F566_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F566_9CRYP) HSP 1 Score: 145 bits (367), Expect = 4.180e-39 Identity = 65/101 (64.36%), Postives = 82/101 (81.19%), Query Frame = 1 Query: 1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTPMK 303
+EQRDL+DRPPS+TKSW++G+ +IGDA HPMMPNLGQGGCQA+ED +VL+ +L V R +IP L+ FY R+ RT++IQGLSRIASDLIV FDTP +
Sbjct: 362 IEQRDLFDRPPSLTKSWSKGHVTMIGDAVHPMMPNLGQGGCQAIEDAYVLSEILGSVEKREDIPGALRSFYFKRLPRTAVIQGLSRIASDLIVSAFDTPFQ 462
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A7S2UZK7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZK7_9STRA) HSP 1 Score: 142 bits (358), Expect = 6.030e-39 Identity = 63/99 (63.64%), Postives = 79/99 (79.80%), Query Frame = 1 Query: 1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTP 297
VEQRDLYDRPP + +SWA+GN VL+GDA HPMMPNLGQGGCQA+ED ++LT +L G + +I + LQ FYR R+ R S++Q LSR+ASDLI+ FDTP
Sbjct: 181 VEQRDLYDRPPELLRSWAKGNVVLMGDAVHPMMPNLGQGGCQAIEDAYMLTEILAGTKTTEKIENNLQTFYRKRIARVSVVQFLSRLASDLIINAFDTP 279
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A6U4D7Q0_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4D7Q0_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.540e-38 Identity = 63/99 (63.64%), Postives = 80/99 (80.81%), Query Frame = 1 Query: 1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTP 297
VEQRDLYDR P + +SW+QG+ ++GDA HPMMPNLGQGGCQA+ED FVL L GV +++P+ LQ +YRSR++RTS +QGLSR+ASDLI+ FDTP
Sbjct: 368 VEQRDLYDRAPELLRSWSQGSATIMGDAAHPMMPNLGQGGCQAIEDAFVLGEKLAGVEDSAQVPNVLQDYYRSRILRTSAVQGLSRLASDLIINAFDTP 466
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Match: A0A7S0VSE2_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VSE2_9CRYP) HSP 1 Score: 144 bits (363), Expect = 1.590e-38 Identity = 65/99 (65.66%), Postives = 79/99 (79.80%), Query Frame = 1 Query: 1 VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLTNLLKGVTSRSEIPSTLQGFYRSRVMRTSIIQGLSRIASDLIVQQFDTP 297
++QRDL+DRPPSV +SW+ G+ +IGDA HPMMPNLGQGGCQA+ED +VL + GVT RS+I TL FYR R+ RT+I QGLSR+ASDLIV FDTP
Sbjct: 366 IDQRDLFDRPPSVLRSWSDGHVTMIGDAVHPMMPNLGQGGCQAIEDAYVLAEKMGGVTDRSQIQGTLSSFYRERLPRTAICQGLSRLASDLIVSAFDTP 464 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10215.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10215.3.1 >prot_D-mesarthrocarpus_Contig10215.3.1 ID=prot_D-mesarthrocarpus_Contig10215.3.1|Name=mRNA_D-mesarthrocarpus_Contig10215.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=101bp VEQRDLYDRPPSVTKSWAQGNTVLIGDACHPMMPNLGQGGCQAMEDGFVLback to top mRNA from alignment at D-mesarthrocarpus_Contig10215:610..2730+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10215.3.1 ID=mRNA_D-mesarthrocarpus_Contig10215.3.1|Name=mRNA_D-mesarthrocarpus_Contig10215.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2121bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10215:610..2730+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10215:610..2730+ >mRNA_D-mesarthrocarpus_Contig10215.3.1 ID=mRNA_D-mesarthrocarpus_Contig10215.3.1|Name=mRNA_D-mesarthrocarpus_Contig10215.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=303bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10215:610..2730+ (Discosporangium mesarthrocarpum MT17_79)back to top |