Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10211.1.1 vs. uniprot
Match:
D8LHF5_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF5_ECTSI)
HSP 1 Score: 84.0 bits (206), Expect = 1.400e-13
Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 2
Query: 569 PVALGMSVQLCRSSGFGGPGTFAVVFLHMFGKMIKLFGDDAVTNLGKDGYDEDDA 733
PVA+ +SV+LC+SSGFGGPGTF VVFLHMF K+++LFGDD + +DGYDEDDA
Sbjct: 91 PVAMFVSVKLCQSSGFGGPGTFVVVFLHMFIKLLQLFGDDDFADSERDGYDEDDA 145
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10211.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 1.40e-13 / Id = 69.09 Sequence D8LHF5_ECTSI
Match Name E-value Identity Description
D8LHF5_ECTSI 1.400e-13 69.09 Lipase_3 domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 1 Seed ortholog 2880.D8LHF5 PFAMs Lipase_3 Model size 1268 Max annot lvl 2759|Eukaryota KEGG rclass RC00020,RC00037,RC00041,RC00094 KEGG ko ko:K17900 KEGG Reaction R02250,R02687 KEGG Pathway ko00561,ko01100,ko04138,map00561,map01100,map04138 KEGG Module M00098 Hectar predicted targeting category other localisation Exons 3 Evalue 2.54e-14 EggNOG OGs 2DUDU@1|root,2QVZS@2759|Eukaryota EC 3.1.1.3 Description Lipase (class 3) Cds size 684 COG category S BRITE ko00000,ko00001,ko00002,ko01000,ko03029,ko04131
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789164.6587188-UTR-D-mesarthrocarpus_Contig10211:325..908 1680789164.6587188-UTR-D-mesarthrocarpus_Contig10211:325..908 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig10211 326..908 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789164.6733382-CDS-D-mesarthrocarpus_Contig10211:908..1034 1680789164.6733382-CDS-D-mesarthrocarpus_Contig10211:908..1034 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10211 909..1034 + 1680789164.6843963-CDS-D-mesarthrocarpus_Contig10211:1535..1850 1680789164.6843963-CDS-D-mesarthrocarpus_Contig10211:1535..1850 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10211 1536..1850 + 1680789164.6928725-CDS-D-mesarthrocarpus_Contig10211:1874..2117 1680789164.6928725-CDS-D-mesarthrocarpus_Contig10211:1874..2117 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10211 1875..2117 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10211.1.1
>prot_D-mesarthrocarpus_Contig10211.1.1 ID=prot_D-mesarthrocarpus_Contig10211.1.1|Name=mRNA_D-mesarthrocarpus_Contig10211.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=228bp
MSVQLCRSSGFGGPGTFAVVFLHMFGKMIKLFGDDAVTNLGKDGYDEDDA back to top mRNA from alignment at D-mesarthrocarpus_Contig10211:326..2117+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10211.1.1 ID=mRNA_D-mesarthrocarpus_Contig10211.1.1|Name=mRNA_D-mesarthrocarpus_Contig10211.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1792bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10211:326..2117+ (Discosporangium mesarthrocarpum MT17_79)GTTTCTGTGGTTGGTTTCTTTTTTTTGTCTTTCTCCGCCAGGATCCTGCT
AGGCTGGGGCTGTAGAGCTGAGGCTGTGTAGCTATAGGGTTTTTTAGAGC
TCCCAAGTCGGGAGGCGGTGTGCAGTTTTCGGGTCAACTTCTTTTCCACT
CACCTGTAGGGCGTGAAAAGATCGTGAGACTCCTCTTTCTGCTCCATGAC
ATAAGAGTTTTTGGCAGAAGGCCCCACCCACGATGCCCCCGGCACCTGGG
ACCTTCCCCCCTGACCCCCCACCCCATCCCACCCCGCCCCACTCCGCAGC
TGTCCCCCTGACCTGTGTTCTGTTCCGCCCTGGCCCTGGCTCTGGCTCTG
GCTCTGGCTCTGGCTATGACCCCCTTTGTTTCCTCCGATACTATCATCAT
ATCTTCCACCATTGTTGATCTATCCTGCTCTCCAAGGTGCTGGCGCGTGC
TTGAAGCGTGAAGGAACTAACTGTTTTTTGTTTTTTTTTTAATAAATGTG
GGATTTATTTGTGCCTCCTCTGCCTCACTTTCAACAACAACGACGACGAC
GACAACAACAAAAAAGTCCCAGTGGCTCTGGGC ATGTCAGTGCAGCTCTG
TAGGTCCAGTGGCTTCGGCGGGCCAGGAACATTCGCGGTGGTGTTCCTAC
ACATGTTTGGCAAGATGATCAAGCTCTTTGGAGACGATGCAGTCACCAAC
CTTGGGAAG GTGAGAGAAGAGAAGAGAAGAGAAGAGAAGAGGAGAGGAGA
GGAGAGGGGAGGACAAGGGCCAAGTGCTCTCGCCGGTTTCACCCCGGTTC
CGTGCCTCTGAGACGCACGCCAGGTAGGTCGCCGCAGTTCTGTACGGTAC
TGTGCGGGTGCTGCTACGGCCCGTTCGAAACGCTCTGTGGCAGCCGCTGG
ATTGCTCTGTGGTAGTTTTTATTATTTTGTGCTGGCGAGTCGCATTGCCA
TACAGTGTGTGTGACGGCTAGGGTTAGGGTTGAGGTTGTTTTTGTTTGTT
TTTTGTTGGGGGCTATTTAAAAACAAGCTCTTCTCCTGAGCTTGACAGGG
TAACAGAACAATGGGGATGTTGAGACTTCCAGGGTGAAGGTGTGTGTGTC
GGATGGGGTGGAAACATTTGCCCTCCAGAATGAGCTGCCCTCCGTCAAAC
CAGAGCTGCCCTCATCCTCTGTGAAACCATCACCAAACCCTTACAAAATC
AAACCGTCAGGATGGATATGATGAGGACGATGCCTCGTCTCTGCACCGTC
CCCGCGCCTTGCGTGGCTTTAGGAACTCCATTGATGAGGAGGATATAATC
AACGCTGCTTTTCCGCCTCTCGGGGAGGCAGCGGAGGCTGCTGCTGCAGC
TGCTGAGGCTGAGGAGGCCAGAAGGTCAGGAGGAGCTCCAGTGGTCCTGG
AGGCTGATGGTGCTAGCCTAGGAGCAGGTGCTGGTGGCCCAGGGGTGTCC
CTGGTGGACAGGGAAGCAATAGAGCACAGGGGCAGGGCTGGGGCTGGGGC
AGGGGCGGGGACTGTGGCACAGGCT GAGCCGGAGCCTGAGCCTGTTGGCG
GTGCTGGCATTTCATGGAGAGAGGGGGGTGATGCCTCAGCAAACAATTGG
ACCCTAGAGGGAGCCAGTGGTGGGTTGAGGGAAGAGCCTGGGGGTCAGAG
CAGGCGGGGGAGAGACAGTGGGAGAGCAATTAGTAGTCATACCCACTCCA
GGCTAATCAGGGAAGGGGCCTTCCCCACAGTGCAGGCCAGTGGAAGGGTG
GGCCTGGTAAAGCAGCAGGGGGGCCTGATAGAGGTGGAGGGG back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10211:326..2117+
>mRNA_D-mesarthrocarpus_Contig10211.1.1 ID=mRNA_D-mesarthrocarpus_Contig10211.1.1|Name=mRNA_D-mesarthrocarpus_Contig10211.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=684bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10211:326..2117+ (Discosporangium mesarthrocarpum MT17_79) back to top