mRNA_D-mesarthrocarpus_Contig1021.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Match: D7FGT6_ECTSI (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT6_ECTSI) HSP 1 Score: 209 bits (531), Expect = 1.510e-59 Identity = 104/144 (72.22%), Postives = 121/144 (84.03%), Query Frame = 1 Query: 1 RASLVNLIESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELRPLFPEVEVNTIDKYQGRDKQVIVVSFVRSNPEGAVGELLRDWRRLNVALSRAKAKLILLGSLWTLSQCSILSSMAGFLTGRGWVYALPPHAHEMYP 432 R +LVN +E +VR+L WGL AG +LG VGVI P+RSQV+LLQAEL+P FP +EVNTIDKYQGRDK+VIVVSFVRSN EG VG LLRDWRRLNVALSRAK KL+L+GSL TLS C++L+S+AG L RGWVY+LPP AH MYP Sbjct: 414 RGTLVNAVECDVVRLLAWGLGVAGFDLGGVGVISPYRSQVQLLQAELKPSFPALEVNTIDKYQGRDKKVIVVSFVRSNAEGTVGHLLRDWRRLNVALSRAKHKLLLVGSLRTLSSCAVLNSLAGILRDRGWVYSLPPGAHRMYP 557
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Match: A0A6H5KHP8_9PHAE (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHP8_9PHAE) HSP 1 Score: 204 bits (518), Expect = 3.070e-56 Identity = 103/147 (70.07%), Postives = 121/147 (82.31%), Query Frame = 1 Query: 1 RASLVNLIESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELRPLFPEVEVNTIDKYQGRDKQVIVVSFVRSNPEGAVGELLRDWRRLNVALSRAKAKLILLGSLWTLSQCSILSSMAGFLTGRGWVYALPPHAHEMYPGVA 441 R +LVN +E +VR+L WGL AG +LG VGVI P+RSQV+LL+AEL+P FP +EVNTIDKYQGRDK+VIVVSFVRSN EG VG LLRDWRRLNVALSRAK KL+L+GSL TLS C++L+S+AG L RGWVY+LP AH MYP A Sbjct: 1926 RGTLVNAVECDVVRLLAWGLDVAGFDLGGVGVISPYRSQVQLLRAELKPSFPALEVNTIDKYQGRDKKVIVVSFVRSNAEGTVGHLLRDWRRLNVALSRAKHKLLLVGSLRTLSSCAVLNSLAGILRDRGWVYSLPSGAHRMYPRAA 2072
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Match: U4LTV9_PYROM (DNA replication ATP-dependent helicase/nuclease n=1 Tax=Pyronema omphalodes (strain CBS 100304) TaxID=1076935 RepID=U4LTV9_PYROM) HSP 1 Score: 142 bits (358), Expect = 7.610e-35 Identity = 74/142 (52.11%), Postives = 100/142 (70.42%), Query Frame = 1 Query: 13 VNLIESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELRPLFPEVEVNTIDKYQGRDKQVIVVSFVRSNPEGAVGELLRDWRRLNVALSRAKAKLILLGSLWTLSQCSILSSMAGFLTGRGWVYALPPHAHEMYPGV 438 +N +E+ L LI G S+GV G +GVI +RSQ++ +Q +L EVE++T DK+QGRDK+VIV+S VRSN EG +GELLRDWRR+NVA +RA++KLI+LGS TL +L G + GRGWVY LP A + +PG+ Sbjct: 1423 INPVEAALTAQLIEGFLSSGVPAGEIGVITVYRSQLKTIQ-QLLSHAKEVEMHTADKFQGRDKEVIVISLVRSNDEGNIGELLRDWRRINVAFTRARSKLIILGSKKTLGGNELLKGFLGLMEGRGWVYQLPKGAEKCHPGI 1563
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Match: UPI0007AC65EC (DNA replication ATP-dependent helicase/nuclease DNA2-like n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=UPI0007AC65EC) HSP 1 Score: 132 bits (332), Expect = 2.420e-34 Identity = 70/139 (50.36%), Postives = 95/139 (68.35%), Query Frame = 1 Query: 25 ESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELR-PLFPEVEVNTIDKYQGRDKQVIVVSFVRSNPEGAVGELLRDWRRLNVALSRAKAKLILLGSLWTLSQCSILSSMAGFLTGRGWVYALPPHAHEMYPGV 438 E+ LV+ L+ L AG +GVI P+R Q++ + + L+ F +EVNT+DKYQGRDK VI+VSFVRSNPEG +GELL+DWRRLNVA++RAK KL++LGS TL + + L + L ++ LP AHE PG+ Sbjct: 84 EAILVQALVTLLLKAGCRASDIGVIAPYRQQLKAISSLLQGDAFKALEVNTVDKYQGRDKSVIIVSFVRSNPEGNLGELLQDWRRLNVAITRAKHKLLMLGSASTLRRYAPLEKLLCHLQQEDMIFQLPAAAHEALPGI 222
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Match: UPI0015AC0429 (DNA replication ATP-dependent helicase/nuclease DNA2 isoform X1 n=2 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AC0429) HSP 1 Score: 136 bits (343), Expect = 7.500e-33 Identity = 72/139 (51.80%), Postives = 95/139 (68.35%), Query Frame = 1 Query: 25 ESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELR-PLFPEVEVNTIDKYQGRDKQVIVVSFVRSNPEGAVGELLRDWRRLNVALSRAKAKLILLGSLWTLSQCSILSSMAGFLTGRGWVYALPPHAHEMYPGV 438 E+ LV ++ L AG G +GVI P+R Q++ + LR P F VEVNT+DKYQGRDK VI+VSFVRSN EG++GELL+DWRRLNVA++RAK KL++LGS T+ + + L + L +Y LPP AHE P + Sbjct: 1283 EAALVHCIVSLLLKAGCKAGDIGVIAPYRQQLKAILGLLRAPAFSAVEVNTVDKYQGRDKGVIIVSFVRSNVEGSLGELLKDWRRLNVAITRAKYKLLMLGSTPTVQRYAPLGMLLSHLEREQMIYQLPPGAHESLPHI 1421
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Match: A0A3N4L0E9_9PEZI (DNA replication ATP-dependent helicase/nuclease n=3 Tax=Morchella TaxID=5193 RepID=A0A3N4L0E9_9PEZI) HSP 1 Score: 130 bits (326), Expect = 9.380e-33 Identity = 67/134 (50.00%), Postives = 95/134 (70.90%), Query Frame = 1 Query: 16 NLIESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELRPLFPEVEVNTIDKYQGRDKQVIVVSFVRSNPEGAVGELLRDWRRLNVALSRAKAKLILLGSLWTLSQCSILSSMAGFLTGRGWVYALPPHA 417 N +E++L L+ GL + G++ +GVI +RSQ++++Q LR P VE++T DK+QGRDK+V+++S VRSN + VGELLRDWRR+NVA +RAK KLI+LGS TLS +L+S G + + WVY LP A Sbjct: 86 NPVEAELAFQLVEGLITTGIDPSSIGVISVYRSQIKIIQNLLRSR-PTVEMHTADKFQGRDKEVVIISLVRSNDDQNVGELLRDWRRINVAFTRAKTKLIILGSKTTLSTNELLASFVGLMERKKWVYDLPAEA 218
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Match: UPI001955B046 (DNA replication ATP-dependent helicase/nuclease DNA2 n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955B046) HSP 1 Score: 136 bits (342), Expect = 1.010e-32 Identity = 72/147 (48.98%), Postives = 100/147 (68.03%), Query Frame = 1 Query: 1 RASLVNLIESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELR-PLFPEVEVNTIDKYQGRDKQVIVVSFVRSNPEGAVGELLRDWRRLNVALSRAKAKLILLGSLWTLSQCSILSSMAGFLTGRGWVYALPPHAHEMYPGV 438 ++ + N E+ LV+ L+ L AG +GVI P+R Q++ + + L+ F +EVNT+DKYQGRDK VI+VSFVRSNPEG +GELL+DWRRLNVA++RAK KL++LGS TL + + L + L ++ LPP AHE PG+ Sbjct: 1224 KSGISNHTEAILVQALVTLLLKAGCRASDIGVIAPYRQQLKAISSLLQGDAFKALEVNTVDKYQGRDKSVIIVSFVRSNPEGNLGELLQDWRRLNVAITRAKHKLLMLGSASTLRRYAPLEKLLRHLQQEDMIFQLPPAAHEALPGI 1370
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Match: A0A1S3SXB0_SALSA (DNA replication ATP-dependent helicase/nuclease n=25 Tax=Salmonidae TaxID=8015 RepID=A0A1S3SXB0_SALSA) HSP 1 Score: 135 bits (341), Expect = 1.380e-32 Identity = 72/140 (51.43%), Postives = 95/140 (67.86%), Query Frame = 1 Query: 16 NLIESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELR-PLFPEVEVNTIDKYQGRDKQVIVVSFVRSNPEGAVGELLRDWRRLNVALSRAKAKLILLGSLWTLSQCSILSSMAGFLTGRGWVYALPPHAHEMYP 432 N E+ LV ++ L AG +GVI P+R Q++ + L P F VEVNT+DKYQGRDK VI+VSFVRS+PEG +GELL+DWRRLNVA++RAK KL+++GS TL + + L + LT V+ LPP AHE+ P Sbjct: 1260 NQTEAALVHGIVSLLLKAGCRASDIGVIAPYRQQLKAISGLLAGPAFSSVEVNTVDKYQGRDKSVIIVSFVRSHPEGNLGELLKDWRRLNVAITRAKHKLLMVGSAPTLRRYAPLEKLLNHLTQESMVFQLPPAAHEVLP 1399
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Match: A0A3B4BP31_PYGNA (DNA replication ATP-dependent helicase/nuclease n=3 Tax=Pygocentrus nattereri TaxID=42514 RepID=A0A3B4BP31_PYGNA) HSP 1 Score: 134 bits (336), Expect = 6.410e-32 Identity = 72/142 (50.70%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 16 NLIESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELRPL-FPEVEVNTIDKYQGRDKQVIVVSFVRSNPEGAVGELLRDWRRLNVALSRAKAKLILLGSLWTLSQCSILSSMAGFLTGRGWVYALPPHAHEMYPGV 438 N E+ LV LI L AG +G +GVI P+R Q++ + L F VEVNT+DKYQGRDK +I+VSFVRS+PEG +GELL+DWRRLNVA++RAK KL++LGS TL + L + + +Y LPP AHE P + Sbjct: 1241 NRTEAILVHALISLLLKAGCKVGDIGVIAPYRQQLKAISNLLEKAEFKAVEVNTVDKYQGRDKSIIIVSFVRSHPEGNLGELLKDWRRLNVAITRAKHKLLMLGSAPTLRLYAPLEKLLTHMQQENMIYQLPPAAHEALPAI 1382
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Match: UPI001CFA5978 (DNA replication ATP-dependent helicase/nuclease DNA2 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFA5978) HSP 1 Score: 132 bits (333), Expect = 1.620e-31 Identity = 71/145 (48.97%), Postives = 95/145 (65.52%), Query Frame = 1 Query: 1 RASLVNLIESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELRP--LFPEVEVNTIDKYQGRDKQVIVVSFVRSNPEGAVGELLRDWRRLNVALSRAKAKLILLGSLWTLSQCSILSSMAGFLTGRGWVYALPPHAHEMY 429 + L N+ E++LV + L AG +G+I P+R Q+R + A L F VEVNT+DKYQGRDK VI+VSFVRSN +G +GELL+DWRRLNVA++RAK KLI+LGS+ TL + S L + +L + LPP AH + Sbjct: 1271 KGGLSNVAEAELVHCVTSALVKAGCKPCDIGIIAPYRQQLRTISALLTTSSFFHAVEVNTVDKYQGRDKSVIIVSFVRSNDDGNLGELLKDWRRLNVAITRAKNKLIMLGSMSTLYRYSPLEKLLNYLKSENMIIELPPGAHNTF 1415 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1021.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1021.1.1 >prot_D-mesarthrocarpus_Contig1021.1.1 ID=prot_D-mesarthrocarpus_Contig1021.1.1|Name=mRNA_D-mesarthrocarpus_Contig1021.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=254bp RASLVNLIESQLVRILIWGLASAGVNLGYVGVICPFRSQVRLLQAELRPLback to top mRNA from alignment at D-mesarthrocarpus_Contig1021:5..1908+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1021.1.1 ID=mRNA_D-mesarthrocarpus_Contig1021.1.1|Name=mRNA_D-mesarthrocarpus_Contig1021.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1904bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1021:5..1908+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1021:5..1908+ >mRNA_D-mesarthrocarpus_Contig1021.1.1 ID=mRNA_D-mesarthrocarpus_Contig1021.1.1|Name=mRNA_D-mesarthrocarpus_Contig1021.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=762bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1021:5..1908+ (Discosporangium mesarthrocarpum MT17_79)back to top |