mRNA_D-mesarthrocarpus_Contig1020.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.320e-45 Identity = 103/239 (43.10%), Postives = 146/239 (61.09%), Query Frame = 1 Query: 16 AQNKRFITKVMFLVAVARSRMISDG-VWFDGKIGIWPITDTVAALRSSKNRKKGTMTLKPATINTERYKELMIDKVIPAIKARTPRPPGHT-IFLQQDGAKPHTGGGVMEAIQAKA---GDSIILESRSANSPDLNVNDLGFFHSIQQLK-----EDVGVLSSPENLVEAAVEALDVYPRETLDRVWQSLFAVLGEVLGSNGDNGYKLPHLGKENLGRTGKLPVNGRVDEEKYRVGNAF 702 +++K +TKVMFL A AR R ++ WFDGKIGIWP A RSS NR KGT+ KP ++ E YK ++++KV+PAI + PR IF+Q+D AKPH + E ++A A G +I ++++ NSPD+NV DLGFF+SIQ L+ +D+ ++L+ EA D RETL+ V+ SL A + LG +GDN YKLPH+GK +L R G LP++ D ++ G A Sbjct: 295 SKSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSSTPEIFIQEDNAKPHKAT-IREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRSKDI------DHLIANVEEAFDECKRETLNNVFLSLQACMEASLGVDGDNNYKLPHMGKASLMREGTLPISIICDPDRINAGRAL 526
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Match: UPI001C262711 (uncharacterized protein LOC121782691 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C262711) HSP 1 Score: 166 bits (421), Expect = 1.580e-45 Identity = 98/227 (43.17%), Postives = 145/227 (63.88%), Query Frame = 1 Query: 19 QNKRFITKVMFLVAVARSRMISDG-VWFDGKIGIWPITDTVAALRSSKNRKKGTMTLKPA-TINTERYKELMIDKVIPAIKARTPRPPGHTIFLQQDGAKPH--TGGGVMEAIQAKAGDSIILESRSANSPDLNVNDLGFFHSIQQLKEDVGVLSSPENLVEAAVEALDVYPRETLDRVWQSLFAVLGEVLGSNGDNGYKLPHLGKENLGRTGKLPVNGRVDEEKYR 687 ++KRFITKVMF+ AV+RS+ +DG FDGKIGI+P T+ V A R SKNR +GT+ KP ++N E +E +++++IPAIKA+ P I++QQD AKPH + EA+ + G L S+ ANSPD NV DLGFF +IQ L++D + ++ + L+ + + +TL+ V+ +L + L ++L +G N YK+PHL KE L RT +LP + V+E R Sbjct: 182 ESKRFITKVMFMCAVSRSQFGTDGQTIFDGKIGIFPFTEQVPAKRKSKNRPRGTLDTKPIPSVNKEAMRECLLNQIIPAIKAKWPANASKEIYIQQDNAKPHLNSSDSQFEALASSNGFKFHLISQPANSPDANVLDLGFFRAIQSLQDDK-LATNIDELLGNVWSSFEELTPQTLNNVFLTLQSCLSKILEVHGGNNYKIPHLNKERLRRTVRLPTSLEVEENLVR 407
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Match: UPI0007EF40B3 (uncharacterized protein LOC108194535 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF40B3) HSP 1 Score: 165 bits (417), Expect = 8.850e-45 Identity = 99/219 (45.21%), Postives = 136/219 (62.10%), Query Frame = 1 Query: 13 RAQNKRFITKVMFLVAVARSRMISDG-VWFDGKIGIWPITDTVAALRSSKNRKKGTMTLKPA-TINTERYKELMIDKVIPAIKARTPRPPGHTIFLQQDGAKPHTGGGVMEAIQAKAGD--SIILESRSANSPDLNVNDLGFFHSIQQLKEDVGVLSSPENLVEAAVEALDVYPRETLDRVWQSLFAVLGEVLGSNGDNGYKLPHLGKENLGRTGKLPV 657 R ++KRFITK+MF+ AVAR R +DG FDGKIGI+P T A RS KNR +G + +KP +I K+ +++K+IPAIKA+ P I +QQD A+PH ++ I+ D +I L ++ ANSPDLN+NDLGFF IQ L+ + + E LV A +EA + TL+ VW SL + E+L +G+N YKLPH+GK L R G+LP Sbjct: 215 RCKSKRFITKIMFMSAVARPRYDADGNCTFDGKIGIFPFTFDEPAARSIKNRARGVIEVKPIESITKVVIKQCLLEKIIPAIKAKWPLDCNRPIVIQQDNARPHICNTDLDFIEVAKSDGFNITLANQPANSPDLNINDLGFFRVIQGLQHEKAPTTVCE-LVGAVLEAYEEVSDSTLNHVWLSLMGCMTEILRKDGNNNYKLPHIGKGKLERLGQLPT 432
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Match: UPI001C275C9E (uncharacterized protein LOC121754448 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C275C9E) HSP 1 Score: 161 bits (407), Expect = 1.030e-44 Identity = 100/237 (42.19%), Postives = 144/237 (60.76%), Query Frame = 1 Query: 19 QNKRFITKVMFLVAVARSRMISDGV-WFDGKIGIWPITDTVAALRSSKNRKKGTMTLKPA-TINTERYKELMIDKVIPAIKARTPRPPGHTIFLQQDGAKPHTGGGVM--EAIQAKAGDSIILESRSANSPDLNVNDLGFFHSIQQLKEDVGVLSSPENLVEAAVEALDVYPRETLDRVWQSLFAVLGEVLGSNGDNGYKLPHLGKENLGRTGKLPVNGRVDEEKYRVGNAFWEASR 717 ++KRFITKVMF+ AV+R SDG FDGKIGI+P T V A+R SKNR +GT+ KP ++N E +E +++++IP IKA+ P I++QQD AKPH + EAI + G L S+ ANSPD NV DLGFF +IQ L++D + E L ++ P +TL++V+ +L + L ++L +G N YK+PHL K+ L RT LP + V+E R + + S+ Sbjct: 56 KSKRFITKVMFMCAVSRPMFGSDGQPIFDGKIGIFPFTQQVPAMRKSKNRPRGTLETKPIPSVNKEAMRECLLNQIIPTIKAKWPANANKEIYIQQDNAKPHLKSSDLQFEAIASTDGFKFHLVSQPANSPDTNVLDLGFFRAIQSLQDDKLATNIDELLANVWSSFQELTP-QTLNKVFLTLQSCLTKILEVHGGNNYKIPHLNKDRLSRTVGLPTSLEVEEILIRDSLEYLQLSQ 291
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Match: A0A6A4Z322_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z322_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.080e-44 Identity = 99/232 (42.67%), Postives = 140/232 (60.34%), Query Frame = 1 Query: 19 QNKRFITKVMFLVAVARSRM--ISDGVWFDGKIGIWPITDTVAALRSSKNRKKGTMTLKPATINTERYKELMIDKVIPAIKARTPRPPGHTIFLQQDGAKPHTGGGVMEAIQAKAGD--SIILESRSANSPDLNVNDLGFFHSIQQLKEDVGVLSSPENLVEAAVEALDVYPRETLDRVWQSLFAVLGEVLGSNGDNGYKLPHLGKENLGRTGKLPVNGRVDEEKYRVGNAF 702 Q+KRFITKVMFL AVAR R W DGKIG W T+TV A RSS+NR GT+ L+P + YK+++ID VIPAIKA+ P ++ +QQD A+PH + A D S+ L+ + NSPDLNV DLGFF +IQ L++ ++ + +V+A +A D +L+R + +L L EV+ + GDN YK+PH+ KE L ++GKLP + E+ + G+ Sbjct: 213 QSKRFITKVMFLTAVARPRWDDAKSECW-DGKIGTWHFTETVPAARSSRNRPAGTLELRPINVTRPIYKKMLIDNVIPAIKAKWPAESSRSVVIQQDNARPHVAPWDAAVVSACTSDGWSMSLKCQPPNSPDLNVLDLGFFRAIQSLQQ-THHSNTYQEIVDATNKAWDDVDPWSLERNFLTLQCCLREVIMAAGDNSYKVPHMKKEALKKSGKLPESVMCSEDVFETGHGL 442
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Match: W4FRT8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FRT8_9STRA) HSP 1 Score: 161 bits (408), Expect = 5.300e-44 Identity = 98/223 (43.95%), Postives = 136/223 (60.99%), Query Frame = 1 Query: 4 KPPRAQ--NKRFITKVMFLVAVARSRMISD-GVWFDGKIGIWPITDTVAALRSSKNRKKGTMTLKPATINTERYKELMIDKVIPAIKARTPRPPGHTIFLQQDGAKPHTGGG---VMEAIQAKAGDSIILESRSANSPDLNVNDLGFFHSIQQLKEDVGVLSSPENLVEAAVEALDVYPRETLDRVWQSLFAVLGEVLGSNGDNGYKLPHLGKENLGRTGKLP 654 KPP Q +KRFITKVMFL AVAR R ++ G WFDGK+G W T+ +RSS+NR GTM LK ++ Y+++++ IPAI+A+ P + +QQD A+PH V A +A A D I+ + NSPD+NV DLGFF +IQ L+E L+ +++V A A + ETLD + +L + L EV+ + GDN YK+PH+GK+ L GKLP Sbjct: 158 KPPHRQCKSKRFITKVMFLSAVARPRWNNNTGEWFDGKLGTWHFTEMAPVMRSSRNRPAGTMELKTKNVDKTAYRQMLVYNAIPAIRAKLPAGETKCVKIQQDNARPHVSAKDPTVAAAYKADAWDMEIV-CQPPNSPDMNVLDLGFFRAIQTLQERHNCLTV-QDVVAATEAACNEVSMETLDSNFMTLQSCLQEVIKATGDNNYKIPHMGKKKLALAGKLP 378
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.890e-43 Identity = 93/229 (40.61%), Postives = 140/229 (61.14%), Query Frame = 1 Query: 19 QNKRFITKVMFLVAVARSRMISD-GVWFDGKIGIWPITDTVAALRSSKNRKKGTMTLKPATINTERYKELMIDKVIPAIKARTPRPPGHTIFLQQDGAKPH---TGGGVMEAIQAKAGDSIILESRSANSPDLNVNDLGFFHSIQQLKEDVGVLSSPENLVEAAVEALDVYPRETLDRVWQSLFAVLGEVLGSNGDNGYKLPHLGKENLGRTGKLPVNGRVDEEKYRVG 693 ++KRFI+KVMFL AVAR R+ D G WFDGKIG W T+ VAA R+S+NR GT+ +P ++ YK ++IDKVIP IK++ P G + +QQD A+PH + +++A ++ G ++ + + NSPDLN+ DLGFF +IQ L+E + ++++ A +A TL+ + +L + E++ + GDN YK+PH+GK L G+LP VD E G Sbjct: 209 KSKRFISKVMFLSAVARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSAGRNVIIQQDNARPHVPPSDSAIVDACKS-GGWNMKVVYQPPNSPDLNILDLGFFRAIQSLQEK-NHSRNIDDIIAATDQAWSDELSSTLNDNFLTLQGCMQEIISAQGDNNYKIPHMGKAKLAARGRLPEVLSVDSEVVACG 435
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 158 bits (400), Expect = 4.150e-43 Identity = 105/225 (46.67%), Postives = 137/225 (60.89%), Query Frame = 1 Query: 13 RAQNKRFITKVMFLVAVARSRMISDGVWFDGKIGIWPITDTVAALRSSKNRKKGTMTLK-PATINTERYKELMIDKVIPAIKARTPRPPGHTIFLQQDGAKPHTGGGVMEAIQA--KAGDSIILESRSANSPDLNVNDLGFFHSIQQLKEDVGVLSSPENLVEAAVEALDVYPRETLDRVWQSLFAVLGEVLGSNGDNGYKLPHLGKENLGRTGKLPVNGRVDEE 678 R ++KRFITK MFL AVAR R +G F GKIGI+P T A R+SKNR GTM K +I E+ K +I+KVIPAI A+ P+ TI +QQD AKPH E +QA K G I L + NSPDLNV DLGFF SIQ L+ + ++ E LV A ++ D YP E L+RV+ + + E++ GDN YK+PH+GK+ L R G LP+ R + + Sbjct: 131 RVKSKRFITKAMFLAAVARPR---NG--FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQGM-RTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAP-TTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQIRCESD 348
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Match: A0A485KJY2_9STRA (Aste57867_8302 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJY2_9STRA) HSP 1 Score: 159 bits (403), Expect = 6.650e-43 Identity = 102/237 (43.04%), Postives = 136/237 (57.38%), Query Frame = 1 Query: 19 QNKRFITKVMFLVAVARSRMIS-DGVWFDGKIGIWPITDTVAALRSSKNRKKGTMTLKPATINTERYKELMIDKVIPAIKARTPRPPGHTIFLQQDGAKPH---TGGGVMEAIQAKAGD--SIILESRSANSPDLNVNDLGFFHSIQQLKEDVGVLSSPENLVEAAVEALDVYPRETLDRVWQSLFAVLGEVLGSNGDNGYKLPHLGKENLGRTGKLPVNGRVDEEKYRVGNAFWEA 711 ++KRFITKVMFL AVA+ R G+W++GKIG WP T+ VAA RSS NR G + K T+ + Y+ +++KV+PAI++ T + P I LQ D AK H T G+ A + AG S L+ + NSPD+N+ DLGFF +IQ L+ + + E LV + D YP E+LD + SL A L E L GDN YK+PH+ K L R G LP N + Y A EA Sbjct: 178 KSKRFITKVMFLSAVAQPRYDEVTGLWWNGKIGTWPFTEKVAAARSSVNRLAGIIETKTITVTKDIYRSFLVNKVLPAIES-TWQGPTPVIKLQHDNAKAHVTSTDAGLCAAFLSSAGRGWSFSLDPQPPNSPDMNILDLGFFAAIQSLQHRLSARTIDE-LVSNVHRSFDEYPMESLDMTFMSLQACLTETLRHFGDNTYKIPHMSKSKLARKGLLPRNCHCPPDVYAAARARLEA 412
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Match: UPI001C26A180 (uncharacterized protein LOC121807090 n=3 Tax=Salvia TaxID=21880 RepID=UPI001C26A180) HSP 1 Score: 160 bits (404), Expect = 8.740e-43 Identity = 96/232 (41.38%), Postives = 136/232 (58.62%), Query Frame = 1 Query: 19 QNKRFITKVMFLVAVARSRMISDG-VWFDGKIGIWPITDTVAALRSSKNRKKGTMTLKPA-TINTERYKELMIDKVIPAIKARTPRPPGHTIFLQQDGAKPHTGGGVME--AIQAKAGDSIILESRSANSPDLNVNDLGFFHSIQQLKEDVGVLSSPENLVEAAVEALDVYPRETLDRVWQSLFAVLGEVLGSNGDNGYKLPHLGKENLGRTGKLPVNGRVDEEKYRVGNAF 702 ++KRFITKVMF+ V R + +G V FDGKIGI+P T A R SKNR +GT+ KP ++N E +E +I K++PAIKA+ P IF+QQD A+PH E A+ G + + +NSPD NV DLGFF +IQ +++D V + ++L+ + D +TL+ V+ +L L E+L G NGYK PH+ KE L R G LP+ V+EE + A+ Sbjct: 213 KSKRFITKVMFMCVVCRPHIAENGEVIFDGKIGIFPFTTKEPAKRGSKNRPRGTLETKPIQSVNKEVMRECLIQKILPAIKAKWPENISKEIFIQQDNARPHINHNDAEFQAVTNTEGFKFHIICQPSNSPDCNVLDLGFFRAIQSIQDDK-VANGVDDLLRNVQSSFDELSAQTLNNVFLTLQGCLTEILKVEGGNGYKTPHMNKERLSRLGILPITLEVEEEIVKAAVAY 443 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1020.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1020.1.1 >prot_D-mesarthrocarpus_Contig1020.1.1 ID=prot_D-mesarthrocarpus_Contig1020.1.1|Name=mRNA_D-mesarthrocarpus_Contig1020.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=243bp PKPPRAQNKRFITKVMFLVAVARSRMISDGVWFDGKIGIWPITDTVAALRback to top mRNA from alignment at D-mesarthrocarpus_Contig1020:6..734+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1020.1.1 ID=mRNA_D-mesarthrocarpus_Contig1020.1.1|Name=mRNA_D-mesarthrocarpus_Contig1020.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=729bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1020:6..734+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1020:6..734+ >mRNA_D-mesarthrocarpus_Contig1020.1.1 ID=mRNA_D-mesarthrocarpus_Contig1020.1.1|Name=mRNA_D-mesarthrocarpus_Contig1020.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=729bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1020:6..734+ (Discosporangium mesarthrocarpum MT17_79)back to top |