mRNA_D-mesarthrocarpus_Contig102.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 196 bits (497), Expect = 4.730e-54 Identity = 103/229 (44.98%), Postives = 137/229 (59.83%), Query Frame = 3 Query: 624 LSHGVGYPRPEFTVCPLQLLSVLQILGTGNCFDDTGMVSSIHESKVQACFHTFSKNFAKGMYKTWISAPEGEYLKEITATYARLGFPGAVGSWDVTYIRWDKAPSSRTVYYTGKERFPSIVHQVTVDHTECALVVTTGFAGATIDKTIARYDPSVDRVKTHEAYTQMEYTLMDSEGREFTEKGAYLIVDDGYHQWRCLMCPLKSALTVADLKWSKSLESVGRMWSAFLG 1310 LS +P P Q+L+ LQIL GN F D +S I V + FH F K FA +Y ++ P GE L+++ Y R+GFPGAVGS DVT+I W P ++ YTGKE P++ QVTVDH+ L VT GF GAT DKTI RYD +V R++T YT+ +Y L +G++F EKG YL+VD+GYH+WR L+ P K + DL +SK LES + + G Sbjct: 71 LSARCCFPPPH-----TQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFG 294
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.020e-52 Identity = 99/213 (46.48%), Postives = 133/213 (62.44%), Query Frame = 3 Query: 672 LQLLSVLQILGTGNCFDDTGMVSSIHESKVQACFHTFSKNFAKGMYKTWISAPEGEYLKEITATYARLGFPGAVGSWDVTYIRWDKAPSSRTVYYTGKERFPSIVHQVTVDHTECALVVTTGFAGATIDKTIARYDPSVDRVKTHEAYTQMEYTLMDSEGREFTEKGAYLIVDDGYHQWRCLMCPLKSALTVADLKWSKSLESVGRMWSAFLG 1310 L++L+ LQIL GN F D +S I V + FH F K FA +Y ++ P GE L+++ Y R+GFPGAVGS DVT+I W P ++ YTGKE P++ QVTVDH+ L VT GF GAT DKTI RYD +V R++T YT+ +Y L +G++F EKG YL+VD+GYH+WR L+ P K + DL +SK LES + + G Sbjct: 173 LKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFG 385
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 191 bits (485), Expect = 1.470e-51 Identity = 95/213 (44.60%), Postives = 134/213 (62.91%), Query Frame = 3 Query: 672 LQLLSVLQILGTGNCFDDTGMVSSIHESKVQACFHTFSKNFAKGMYKTWISAPEGEYLKEITATYARLGFPGAVGSWDVTYIRWDKAPSSRTVYYTGKERFPSIVHQVTVDHTECALVVTTGFAGATIDKTIARYDPSVDRVKTHEAYTQMEYTLMDSEGREFTEKGAYLIVDDGYHQWRCLMCPLKSALTVADLKWSKSLESVGRMWSAFLG 1310 L++L+ LQIL GNCF D +S I A FH F++ FA+ MY I P G+Y K++ Y RLGF GA GS DVT+I W P ++ YTGKE +P++ +QVTVDHT+ L VT GF G+T DK+I RYD +V +++ Y++ E+T+ +++G + KG YL+VD+GYH+W L+ P K + DL +SK LESV + F G Sbjct: 157 LKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFG 369
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 179 bits (453), Expect = 4.680e-48 Identity = 91/206 (44.17%), Postives = 123/206 (59.71%), Query Frame = 3 Query: 687 VLQILGTGNCFDDTGMVSSIHESKVQACFHTFSKNFAKGMYKTWISAPEGEYLKEITATYARLGFPGAVGSWDVTYIRWDKAPSSRTVYYTGKERFPSIVHQVTVDHTECALVVTTGFAGATIDKTIARYDPSVDRVKTHEAYTQMEYTLMDSEGREFTEKGAYLIVDDGYHQWRCLMCPLKSALTVADLKWSKSLESVGRMWSAF 1304 V Q+LG GNCFDD +S + +S Q FH F ++FA M+ I P G YL E+ + +LG+ GA GS DVT+I W+ P + +TGKE FP+I + VTVDH L VT GF GAT DKTI RYD V++++T YT+ EY L + G + +G +LIVD+GYH+W L+ P K D +S+ LESV + F Sbjct: 40 VPQVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF 245
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 172 bits (435), Expect = 1.280e-44 Identity = 95/214 (44.39%), Postives = 128/214 (59.81%), Query Frame = 3 Query: 675 QLLSVLQILGTGNCFDDTGMVSSIHESKVQACFHTFSKNFAKGMYKTWISAPEGEY--LKEITATYARLGFPGAVGSWDVTYIRWDKAPSSRTVYYTGKERFPSIVHQVTVDHTECALVVTTGFAGATIDKTIARYDPSVDRVKTHEAYTQMEYTLMDSEGREFTEKGAYLIVDDGYHQWRCLMCPLKSALTVADLKWSKSLESVGRMWSAFLG 1310 ++L+ L ILG GN F +S + VQ FH F ++FA MY I P E L + Y +LGFPGA+GS DVT+I W + P ++ YTGKE P++ +QVTV+H L VT GF G+T DKTI D +VDR++T + Y + +T+ +G T KG YLIVD+GYH+WR L+ P K L+ ADL +SK LESV + F G Sbjct: 127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFG 340
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE) HSP 1 Score: 168 bits (425), Expect = 3.150e-43 Identity = 86/190 (45.26%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 657 FTVCPLQLLSVLQILGTGNCFDDTGMVSSIHESKVQACFHTFSKNFAKGMYKTWISAPEGEYLKEITATYARLGFPGAVGSWDVTYIRWDKAPSSRTVYYTGKERFPSIVHQVTVDHTECALVVTTGFAGATIDKTIARYDPSVDRVKTHEAYTQMEYTLMDSEGREFTEKGAYLIVDDGYHQWRCLMCP 1226 F ++L+ LQILG GNCFDD +S + + A FH F K+FA+ +++ I P G Y E+ Y +LG GA+GS DVT+I W P + YTGKE FP+I +QVTVDH A+ +T+GF GAT DKTI RYD V +KT YT+ Y L ++G KG Y IVD+GYH+ L P Sbjct: 244 FDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHEVNSLGHP 433
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 164 bits (415), Expect = 6.460e-42 Identity = 95/242 (39.26%), Postives = 131/242 (54.13%), Query Frame = 3 Query: 675 QLLSVLQILGTGNCFDDTGMVSSIHESKVQACFHTFSKNFAKGMYKTWISAP--EGEYLKEITATYARLGFPGAVGSWDVTYIRWDKAPSSRTVYYTGKERFPSIVHQVTVDHTECALVVTTGFAGATIDKTIARYDPSVDRVKTHEAYT----------------------------QMEYTLMDSEGREFTEKGAYLIVDDGYHQWRCLMCPLKSALTVADLKWSKSLESVGRMWSAFLG 1310 ++L+ L ILG GNCF +S + VQ FH F ++FA+ MY I P E L + Y RLGF GAVGS DVT+I W + P ++ YTGKE FP+I +QVTVDH A+ VT GF G+T DKTI +D +V+++ T + YT + + + + +G T KG YL+VD+GYH+W+ L+ P K L+ DL +SK LESV + F G Sbjct: 85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFG 326
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.070e-41 Identity = 88/207 (42.51%), Postives = 119/207 (57.49%), Query Frame = 3 Query: 690 LQILGTGNCFDDTGMVSSIHESKVQACFHTFSKNFAKGMYKTWISAPEGEYLKEITATYARLGFPGAVGSWDVTYIRWDKAPSSRTVYYTGKERFPSIVHQVTVDHTECALVVTTGFAGATIDKTIARYDPSVDRVKTHEAYTQMEYTLMDSEGREFTEKGAYLIVDDGYHQWRCLMCPLKSALTVADLKWSKSLESVGRMWSAFLG 1310 L++LG GNCFDD +S + ES QA FH F ++ A M+ I P G YL E+ + +LG GA GS DVT+I + P + +TGKE FP+I ++VTVDH AL VT GFAG T DKT RYD V++++T YT+ EY L G E T +G +LIVD+GY++ + D +S+ LESV + F G Sbjct: 137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFG 331
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Match: A0A6H5KEF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF0_9PHAE) HSP 1 Score: 150 bits (380), Expect = 9.860e-39 Identity = 85/195 (43.59%), Postives = 113/195 (57.95%), Query Frame = 3 Query: 624 LSHGVGYPRP---EFTVCPLQLLSVLQILGTGNCFDDTGMVSSIHESKVQACFHTFSKNFAKGMYKTWISAPEGEYLKEITATYARLGFPGAVGSWDVTYIRWDKAPSSRTVYYTGKERFPSIVHQVTVDHTECALVVTTGFAGATIDKTIARYDPSVDRVKTHEAYTQMEYTLMDSEGREFTEKGAYLIVDDGY 1199 L +G P P E T PL+L ++LG GNCFDD +S + +S QA FH F ++FA EI + +LG+ GA GS DVT+I W+ P + +TGKE FP+I ++VTVDH AL VT GF GAT DKTI RYD V++++T YT+ EY L + G E T +G +LIVD+GY Sbjct: 66 LQKWIGVPLPANREGT--PLEL----KVLGKGNCFDDVEQLSKMSKSMAQATFHKFCRHFAA----------------EIMGIFHQLGYTGACGSTDVTHIDWNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGY 238
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Match: A0A6H5KH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH50_9PHAE) HSP 1 Score: 151 bits (381), Expect = 1.200e-38 Identity = 77/166 (46.39%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 675 QLLSVLQILGTGNCFDDTGMVSSIHESKVQACFHTFSKNFAKGMYKTWISAPEGEYLKEITATYARLGFPGAVGSWDVTYIRWDKAPSSRTVYYTGKERFPSIVHQVTVDHTECALVVTTGFAGATIDKTIARYDPSVDRVKTHEAYTQMEYTLMDSEGREFTEKG 1172 Q+L+ LQILG GNCFDD +S + + A FH F K+FA+ +++ I P G Y E+ Y +LG GA+GS DVT+I W P + YTGKE FP+I +QVTVDH A+ +T+GF GAT DKTI RYD V +KT YT+ Y L ++G KG Sbjct: 3 QVLTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIMRYDAGVHTIKTDAQYTKRTYKLRRADGTYRERKG 168 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig102.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig102.7.1 >prot_D-mesarthrocarpus_Contig102.7.1 ID=prot_D-mesarthrocarpus_Contig102.7.1|Name=mRNA_D-mesarthrocarpus_Contig102.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=235bp MSSYLSHGVGYPRPEFTVCPLQLLSVLQILGTGNCFDDTGMVSSIHESKVback to top mRNA from alignment at D-mesarthrocarpus_Contig102:33805..35446+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig102.7.1 ID=mRNA_D-mesarthrocarpus_Contig102.7.1|Name=mRNA_D-mesarthrocarpus_Contig102.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1642bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig102:33805..35446+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig102:33805..35446+ >mRNA_D-mesarthrocarpus_Contig102.7.1 ID=mRNA_D-mesarthrocarpus_Contig102.7.1|Name=mRNA_D-mesarthrocarpus_Contig102.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=705bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig102:33805..35446+ (Discosporangium mesarthrocarpum MT17_79)back to top |