mRNA_D-mesarthrocarpus_Contig10191.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Match: A0A6H5K835_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K835_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.810e-59 Identity = 128/205 (62.44%), Postives = 148/205 (72.20%), Query Frame = 3
Query: 459 HFLLATRGELAPTALAFLR--------SEEGHS-GLAVGVRWGHLESLVQGGELGHFLDAAFTNRWGQGGQG-PRTPPFAAPTWLKKDPPQAGGKAIFDLCSPFAPSGDQPEAIAALLRGVANGKRHQTLLGATGTGKTFIIANVIAEVGIPTLVLAPNKLLAAQLTNELRALFPNNAVEYFVSYYDYYMPEAYLSSSDTYIDKV 1043
LLATR +AP A AFL+ S+ G + G+AV +RW L+ LVQ G LG L T +GG G P P FA P WL K+ + G A+FDL SPF P+GDQPEAI AL +G+ GKRHQTLLGATGTGKTFIIANVI E +PTLVLAPNK+LA+QLTNELRALFPNNAVE FVSYYDYY+PEA+ S+SDTYIDKV
Sbjct: 139 QLLLATRAAVAPAAEAFLQGAHANLGQSDFGETRGVAV-MRWEQLQQLVQDGGLGRHL----TRSRRRGGSGDPNAPSFALPAWLVKERERGVG-AMFDLDSPFEPAGDQPEAIKALSQGIEEGKRHQTLLGATGTGKTFIIANVIQEARLPTLVLAPNKVLASQLTNELRALFPNNAVELFVSYYDYYLPEAFNSASDTYIDKV 337
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Match: UPI0019A2FD7F (Excinuclease ABC subunit UvrB n=1 Tax=Gloeobacterales cyanobacterium ES-bin-313 TaxID=2812629 RepID=UPI0019A2FD7F) HSP 1 Score: 159 bits (402), Expect = 6.270e-40 Identity = 81/110 (73.64%), Postives = 92/110 (83.64%), Query Frame = 3
Query: 717 IFDLCSPFAPSGDQPEAIAALLRGVANGKRHQTLLGATGTGKTFIIANVIAEVGIPTLVLAPNKLLAAQLTNELRALFPNNAVEYFVSYYDYYMPEAYLSSSDTYIDKVS 1046
+F + SP+ P+GDQP AIAAL +G+A+ R QTLLGATGTGKTF IANVIA VG PTLVLA NK LAAQL NELR FPNNAVEYFVSYYDYY PEAY++SSDTYI+K +
Sbjct: 5 LFKVVSPYEPTGDQPTAIAALNQGIADNVRFQTLLGATGTGKTFTIANVIANVGKPTLVLAHNKTLAAQLCNELREFFPNNAVEYFVSYYDYYQPEAYIASSDTYIEKTA 114
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Match: A0A3B9FGM9_9PROT (Excinuclease ABC subunit UvrB (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3B9FGM9_9PROT) HSP 1 Score: 151 bits (381), Expect = 6.560e-40 Identity = 77/122 (63.11%), Postives = 93/122 (76.23%), Query Frame = 3
Query: 699 QAGGKAIFDLCSPFAPSGDQPEAIAALLRGVANGKRHQTLLGATGTGKTFIIANVIAEVGIPTLVLAPNKLLAAQLTNELRALFPNNAVEYFVSYYDYYMPEAYLSSSDTYIDKVSLSSVQL 1064
++ G A FDL S F P+GDQP AIA L+ G+ G+R Q LLG TG+GKTF A+VI E+ PTL+LAPNK LAAQL E+R+LFPNNAVEYFVSYYDYY PEAY+ SDTYI+K S + Q+
Sbjct: 13 RSSGPANFDLTSEFKPAGDQPTAIAELIAGIKEGERDQVLLGVTGSGKTFTAAHVIQEIKRPTLILAPNKTLAAQLYGEMRSLFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQI 134
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Match: A0A2H0RV37_9BACT (Excinuclease ABC subunit B (Fragment) n=1 Tax=Candidatus Peregrinibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_49_24 TaxID=1974789 RepID=A0A2H0RV37_9BACT) HSP 1 Score: 149 bits (377), Expect = 1.040e-39 Identity = 75/107 (70.09%), Postives = 87/107 (81.31%), Query Frame = 3
Query: 720 FDLCSPFAPSGDQPEAIAALLRGVANGKRHQTLLGATGTGKTFIIANVIAEVGIPTLVLAPNKLLAAQLTNELRALFPNNAVEYFVSYYDYYMPEAYLSSSDTYIDK 1040
F+L S F P+GDQP+AI LL+G+ G+RHQTLLGATGTGKTF +ANV+ EV PTLVLA NK LAAQL +E + FPNNAV YFVSYYDYY PEAYL +SDTYI+K
Sbjct: 7 FELVSSFQPTGDQPKAIEKLLKGLETGQRHQTLLGATGTGKTFAMANVVQEVQRPTLVLAHNKTLAAQLCSEFQGFFPNNAVSYFVSYYDYYQPEAYLPTSDTYIEK 113
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Match: A0A7Y2FQA2_9DELT (DEAD/DEAH box helicase family protein (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y2FQA2_9DELT) HSP 1 Score: 145 bits (366), Expect = 2.330e-39 Identity = 72/106 (67.92%), Postives = 86/106 (81.13%), Query Frame = 3
Query: 723 DLCSPFAPSGDQPEAIAALLRGVANGKRHQTLLGATGTGKTFIIANVIAEVGIPTLVLAPNKLLAAQLTNELRALFPNNAVEYFVSYYDYYMPEAYLSSSDTYIDK 1040
+L + +P GDQP AI+ALL G++ G+RHQ LLG TG+GKTF IANVI PTL++APNK LAAQL +E+R LFPNNAVEYFVSYYDYY PEAY+ SSDTYI+K
Sbjct: 6 ELVTDLSPKGDQPAAISALLEGLSRGERHQVLLGITGSGKTFSIANVIDTTKRPTLIIAPNKTLAAQLYSEMRELFPNNAVEYFVSYYDYYQPEAYIPSSDTYIEK 111
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Match: UPI001E3F65E2 (DEAD/DEAH box helicase family protein n=1 Tax=Paenibacillus sp. 1001270B_150601_E10 TaxID=2787079 RepID=UPI001E3F65E2) HSP 1 Score: 149 bits (376), Expect = 3.130e-39 Identity = 75/109 (68.81%), Postives = 88/109 (80.73%), Query Frame = 3
Query: 720 FDLCSPFAPSGDQPEAIAALLRGVANGKRHQTLLGATGTGKTFIIANVIAEVGIPTLVLAPNKLLAAQLTNELRALFPNNAVEYFVSYYDYYMPEAYLSSSDTYIDKVS 1046
F+L S FAP GDQP+AI L++G+ + KR+QTLLGATGTGKTF IA IA+V PTLV+A NK LAAQL +E + FPNNAVEYFVSYYDYY PEAY+ SSDTYI+K S
Sbjct: 11 FELVSEFAPQGDQPQAITELVQGIQDNKRYQTLLGATGTGKTFTIAQTIAKVNKPTLVIAHNKTLAAQLCSEFKEFFPNNAVEYFVSYYDYYQPEAYIPSSDTYIEKDS 119
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Match: A0A847C5W7_9FIRM (DEAD/DEAH box helicase family protein (Fragment) n=1 Tax=Oscillospiraceae bacterium TaxID=2485925 RepID=A0A847C5W7_9FIRM) HSP 1 Score: 145 bits (367), Expect = 4.000e-39 Identity = 73/110 (66.36%), Postives = 87/110 (79.09%), Query Frame = 3
Query: 717 IFDLCSPFAPSGDQPEAIAALLRGVANGKRHQTLLGATGTGKTFIIANVIAEVGIPTLVLAPNKLLAAQLTNELRALFPNNAVEYFVSYYDYYMPEAYLSSSDTYIDKVS 1046
+F L S + PSGDQPEAIA+L+ G+ NG +HQ LLG TG+GKTF +AN+IA V PTLVLA NK LA QL EL+ LFP NAVEYFVSYYDYY PEAY+ ++DTYI+K S
Sbjct: 1 MFKLHSEYGPSGDQPEAIASLVEGINNGDKHQCLLGVTGSGKTFTMANIIAAVNKPTLVLAHNKTLAGQLYGELKELFPENAVEYFVSYYDYYQPEAYMPTTDTYIEKDS 110
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Match: A0A7S2WLB6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLB6_9STRA) HSP 1 Score: 150 bits (380), Expect = 4.610e-39 Identity = 74/109 (67.89%), Postives = 92/109 (84.40%), Query Frame = 3
Query: 720 FDLCSPFAPSGDQPEAIAALLRGVANGKRHQTLLGATGTGKTFIIANVIAEVGIPTLVLAPNKLLAAQLTNELRALFPNNAVEYFVSYYDYYMPEAYLSSSDTYIDKVS 1046
F+L +PF P+GDQP AI AL RGV G++ QTLLGATGTGKTF++ANVI PTL+LAPNK+LAAQL NE++ALFP+NAVEYFVS+YDYY+PE+Y + DTY+DKV+
Sbjct: 131 FNLQAPFVPTGDQPTAIRALTRGVDEGRQFQTLLGATGTGKTFMMANVIQHAQRPTLLLAPNKVLAAQLYNEMKALFPDNAVEYFVSFYDYYLPESYSAVKDTYVDKVT 239
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Match: UPI0015E7072F (DEAD/DEAH box helicase family protein n=1 Tax=Bacillus subtilis TaxID=1423 RepID=UPI0015E7072F) HSP 1 Score: 144 bits (364), Expect = 6.460e-39 Identity = 71/107 (66.36%), Postives = 86/107 (80.37%), Query Frame = 3
Query: 720 FDLCSPFAPSGDQPEAIAALLRGVANGKRHQTLLGATGTGKTFIIANVIAEVGIPTLVLAPNKLLAAQLTNELRALFPNNAVEYFVSYYDYYMPEAYLSSSDTYIDK 1040
F L S ++P GDQP+AI ++ G+ NGK+HQTLLGATGTGKTF ++NVI V PTLV+A NK LA QL +E + LFPNNAVEYFVSYYDYY PEAY+ SSDT+I+K
Sbjct: 5 FQLVSDYSPQGDQPKAIEQIVTGIQNGKKHQTLLGATGTGKTFTMSNVIQAVNKPTLVMAHNKTLAGQLYSESKQLFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEK 111
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Match: A0A836SCF1_9BACT (Excinuclease ABC subunit B (Fragment) n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A836SCF1_9BACT) HSP 1 Score: 143 bits (360), Expect = 8.930e-39 Identity = 71/109 (65.14%), Postives = 86/109 (78.90%), Query Frame = 3
Query: 714 AIFDLCSPFAPSGDQPEAIAALLRGVANGKRHQTLLGATGTGKTFIIANVIAEVGIPTLVLAPNKLLAAQLTNELRALFPNNAVEYFVSYYDYYMPEAYLSSSDTYIDK 1040
A F L SP+ P+GDQP AI L+ GV G R+QTLLG TG+GKTF +A+VI +VG PTLV++ NK LAAQL EL+ALFP NAVEYF+SYYDYY PEAY+ +DTYI+K
Sbjct: 2 AKFRLVSPYEPTGDQPRAIEKLVEGVLEGYRYQTLLGVTGSGKTFTVAHVIEKVGKPTLVISHNKTLAAQLYGELKALFPENAVEYFISYYDYYQPEAYIPQTDTYIEK 110 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10191.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10191.1.1 >prot_D-mesarthrocarpus_Contig10191.1.1 ID=prot_D-mesarthrocarpus_Contig10191.1.1|Name=mRNA_D-mesarthrocarpus_Contig10191.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=312bp MRAGVAFWLMLRCLNGVQAMGRVASRQHLSLRCWTRTSSWPINHGNEIGDback to top mRNA from alignment at D-mesarthrocarpus_Contig10191:1912..3890+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10191.1.1 ID=mRNA_D-mesarthrocarpus_Contig10191.1.1|Name=mRNA_D-mesarthrocarpus_Contig10191.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1979bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10191:1912..3890+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10191:1912..3890+ >mRNA_D-mesarthrocarpus_Contig10191.1.1 ID=mRNA_D-mesarthrocarpus_Contig10191.1.1|Name=mRNA_D-mesarthrocarpus_Contig10191.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=936bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10191:1912..3890+ (Discosporangium mesarthrocarpum MT17_79)back to top |