mRNA_D-mesarthrocarpus_Contig10190.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Match: A0A6H5KP25_9PHAE (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KP25_9PHAE) HSP 1 Score: 258 bits (659), Expect = 1.930e-80 Identity = 121/178 (67.98%), Postives = 154/178 (86.52%), Query Frame = 1 Query: 1 QAASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNAAFKNFLDLIPQVRELIHDFANSRYKACLGHLASIRGELDLDLHLHSHVTKLYKNIEDKCLMQYFSPYTSVKLSAMSESLGMQVPELEKKVAALIIGNQMLARIDSKNSTLHGKHADQRSTSYRKVLE 534 +AA KF++V+P+LG+SF V+ PED+ VYGGLCALATF REE+++R+LDNA+FKNFLDL+PQVREL +DFANSRY++CL +LA ++G+L LDLHLH H+ LYK +EDKCLMQYFSPY+SV+L AMSE+ GM+VPELEKKVAAL+I NQ+ ARIDS N+TLH KH +QR S+RK+ E Sbjct: 287 KAARKFVDVAPELGSSFDRVVAPEDIAVYGGLCALATFSREEMRQRVLDNASFKNFLDLVPQVRELTNDFANSRYRSCLKYLADLKGDLQLDLHLHRHLDTLYKMVEDKCLMQYFSPYSSVRLGAMSEAFGMEVPELEKKVAALVISNQISARIDSTNATLHAKHIEQRGISFRKMHE 464
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Match: A0A7S0HHU9_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HHU9_9EUKA) HSP 1 Score: 195 bits (496), Expect = 9.750e-58 Identity = 91/176 (51.70%), Postives = 129/176 (73.30%), Query Frame = 1 Query: 4 AASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNAAFKNFLDLIPQVRELIHDFANSRYKACLGHLASIRGELDLDLHLHSHVTKLYKNIEDKCLMQYFSPYTSVKLSAMSESLGMQVPELEKKVAALIIGNQMLARIDSKNSTLHGKHADQRSTSYRKVL 531 AA KFLE +P+LG+SF ++ P+DV YG LCALA+F R E+K +++DN F++FL+L+P+VREL+HDF NSRY +CL L ++ +L LDLHLH HV LY +I K L+QYFSP+ +V + M+++ V ELEK++A LI+ Q+ ARIDS N LH +HADQR+ +++K L Sbjct: 197 AARKFLETNPELGSSFHEIVSPQDVATYGALCALASFDRAELKAKVIDNTNFRSFLELVPEVRELVHDFYNSRYASCLKTLEKLKPDLLLDLHLHDHVAALYTDIRSKALVQYFSPFVTVDMKRMADAFNTPVMELEKELATLIMAGQIPARIDSHNKVLHARHADQRTATFQKAL 372
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Match: A0A7S4JGJ4_9EUKA (Hypothetical protein n=3 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JGJ4_9EUKA) HSP 1 Score: 190 bits (482), Expect = 1.130e-57 Identity = 93/176 (52.84%), Postives = 126/176 (71.59%), Query Frame = 1 Query: 4 AASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNAAFKNFLDLIPQVRELIHDFANSRYKACLGHLASIRGELDLDLHLHSHVTKLYKNIEDKCLMQYFSPYTSVKLSAMSESLGMQVPELEKKVAALIIGNQMLARIDSKNSTLHGKHADQRSTSYRKVL 531 AA KF+EVSP+LG++FS V +D+ +YGGLCALA+F R E+K +LLDN FK L+L P+VREL+HDF NS+Y ACL +L ++ +L LDLHLH HV L + I K L+QYFSPY V + AM+++ QV +LE+++A LI Q+ ARIDS N L+ +H DQRS ++ K L Sbjct: 20 AARKFVEVSPELGSAFSDVASQQDIALYGGLCALASFDRSELKTKLLDNGGFKQLLELFPEVRELVHDFHNSKYAACLQYLRKLKPDLLLDLHLHDHVDSLLEAIHSKALVQYFSPYVRVNMVAMADAFYFQVDQLERELAKLIGSGQIEARIDSHNKVLYARHDDQRSATFTKAL 195
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Match: CSN1_ARATH (COP9 signalosome complex subunit 1 n=39 Tax=Brassicaceae TaxID=3700 RepID=CSN1_ARATH) HSP 1 Score: 195 bits (496), Expect = 1.420e-57 Identity = 94/177 (53.11%), Postives = 132/177 (74.58%), Query Frame = 1 Query: 4 AASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNAAFKNFLDLIPQVRELIHDFANSRYKACLGHLASIRGELDLDLHLHSHVTKLYKNIEDKCLMQYFSPYTSVKLSAMSESLGMQVPELEKKVAALIIGNQMLARIDSKNSTLHGKHADQRSTSYRKVLE 534 AA KFL+V+P+LG S++ VI P+D+ YGGLCALA+F R E+K++++DN F+NFL+L+P VRELI+DF +SRY +CL +LAS++ L LD+HLH HV LY I K L+QY P+ SV LS M+++ V LEK++ ALI NQ+ ARIDS N L+ +HADQR+ +++KVL+ Sbjct: 234 AARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQ 410
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Match: L8GVV1_ACACA (PCI domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVV1_ACACA) HSP 1 Score: 194 bits (494), Expect = 2.880e-57 Identity = 93/176 (52.84%), Postives = 129/176 (73.30%), Query Frame = 1 Query: 4 AASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNAAFKNFLDLIPQVRELIHDFANSRYKACLGHLASIRGELDLDLHLHSHVTKLYKNIEDKCLMQYFSPYTSVKLSAMSESLGMQVPELEKKVAALIIGNQMLARIDSKNSTLHGKHADQRSTSYRKVL 531 AA KFLE + DLG F+ +I P+DV ++GGLCALA F R E+K ++LDN AFKNFL+L+PQVRELI DF NSRY +CL +L +R EL+LD+HLH HV LY+ I +K ++QYFSP+TSV L+ M+++ VP LEK++A LI+ N + ARIDS N L+ + ++R ++ + L Sbjct: 228 AARKFLETTFDLGNHFNEIISPQDVAIFGGLCALAMFDRAELKSKVLDNTAFKNFLELVPQVRELIADFYNSRYASCLNYLQQLRPELELDIHLHDHVESLYQKIRNKAIVQYFSPFTSVDLNTMAQAFNTDVPILEKELAGLIMENSIQARIDSHNKILYARTTNERCNTFERAL 403
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Match: A0A2C9VUH0_MANES (PCI domain-containing protein n=9 Tax=fabids TaxID=91835 RepID=A0A2C9VUH0_MANES) HSP 1 Score: 193 bits (491), Expect = 6.550e-57 Identity = 92/177 (51.98%), Postives = 130/177 (73.45%), Query Frame = 1 Query: 4 AASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNAAFKNFLDLIPQVRELIHDFANSRYKACLGHLASIRGELDLDLHLHSHVTKLYKNIEDKCLMQYFSPYTSVKLSAMSESLGMQVPELEKKVAALIIGNQMLARIDSKNSTLHGKHADQRSTSYRKVLE 534 AA KFLEV+P+LG S++ VI P+DV YGGLCALA+F R E+K +++DN F+NFL+L+P+VRELIHDF +S Y +CL +L +++ L LD+HLH HV LY I +K L+QY P+ SV L+ M+ + V LEK++ ALI NQ+ ARIDS N L+ +HADQR+ ++++VL+ Sbjct: 226 AARKFLEVTPELGNSYTEVIAPQDVATYGGLCALASFERTELKNKVIDNLNFRNFLELVPEVRELIHDFYSSHYASCLDYLGNLKANLLLDVHLHDHVETLYDQIRNKALIQYTHPFVSVDLNMMANAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQ 402
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Match: A0A0V0ID26_SOLCH (Putative COP9 signalosome complex subunit 1-like n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0ID26_SOLCH) HSP 1 Score: 189 bits (481), Expect = 7.090e-57 Identity = 90/177 (50.85%), Postives = 126/177 (71.19%), Query Frame = 1 Query: 4 AASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNAAFKNFLDLIPQVRELIHDFANSRYKACLGHLASIRGELDLDLHLHSHVTKLYKNIEDKCLMQYFSPYTSVKLSAMSESLGMQVPELEKKVAALIIGNQMLARIDSKNSTLHGKHADQRSTSYRKVLE 534 AA KFLEV P+LG +++ VI P+D YGGLCALA+F R E+K +++DN F+NFL+L+P++RELIHDF S Y +CL +L +++ L LD+HLH HV LY I K L+QY P+ SV L+ M+ + V LEK++ ALI NQ+ ARIDS N L+ +HADQR+ +++KVL+ Sbjct: 95 AARKFLEVGPELGNNYTEVIAPQDAATYGGLCALASFDRAELKSKVIDNINFRNFLELVPEIRELIHDFYTSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRSKALIQYTHPFVSVDLNMMANAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQ 271
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Match: UPI001CB8C359 (COP9 signalosome complex subunit 1 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8C359) HSP 1 Score: 192 bits (488), Expect = 3.300e-56 Identity = 91/177 (51.41%), Postives = 129/177 (72.88%), Query Frame = 1 Query: 4 AASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNAAFKNFLDLIPQVRELIHDFANSRYKACLGHLASIRGELDLDLHLHSHVTKLYKNIEDKCLMQYFSPYTSVKLSAMSESLGMQVPELEKKVAALIIGNQMLARIDSKNSTLHGKHADQRSTSYRKVLE 534 AA KFLE SP+LG ++S VI P+DV YGGLCALA+F R E+K +++DN F+NFL+L+P+VRELIHDF +SRY +CL +L +++ L LD+HLH HV LY I +K L+QY P+ SV L+ M+++ V L+K++ LI NQ+ ARIDS N L+ +HADQR ++++VL+ Sbjct: 252 AARKFLETSPELGNNYSEVIAPQDVATYGGLCALASFDRAELKAKVIDNINFRNFLELVPEVRELIHDFYSSRYASCLQYLVNLKANLMLDIHLHDHVDALYVRIRNKALIQYTHPFVSVDLNMMADAFKTSVSGLQKELEGLITDNQIQARIDSHNKVLYARHADQRKATFQRVLQ 428
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Match: A0A445ADS6_ARAHY (PCI domain-containing protein n=3 Tax=Arachis TaxID=3817 RepID=A0A445ADS6_ARAHY) HSP 1 Score: 192 bits (487), Expect = 3.470e-56 Identity = 93/177 (52.54%), Postives = 129/177 (72.88%), Query Frame = 1 Query: 4 AASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNAAFKNFLDLIPQVRELIHDFANSRYKACLGHLASIRGELDLDLHLHSHVTKLYKNIEDKCLMQYFSPYTSVKLSAMSESLGMQVPELEKKVAALIIGNQMLARIDSKNSTLHGKHADQRSTSYRKVLE 534 AA KFLE +P+LG+ +S VI P+DV YGGLCALATF R E+K +++DN F+NFL+L+P+VRELI+DF +S Y +CL +L +++ L LD+HLH HV LY I K L+QY P+ SV LS M+ + V EL+K++ ALI NQ+ ARIDS N L+ +HADQR+ ++++VLE Sbjct: 239 AARKFLETNPELGSHYSEVIAPQDVATYGGLCALATFDRTELKSKVIDNLNFRNFLELVPEVRELINDFYSSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRHKALIQYTLPFVSVDLSMMANAFKTTVAELQKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLE 415
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Match: M1CNN0_SOLTU (Cop11 protein n=12 Tax=Solanaceae TaxID=4070 RepID=M1CNN0_SOLTU) HSP 1 Score: 191 bits (485), Expect = 6.010e-56 Identity = 91/177 (51.41%), Postives = 127/177 (71.75%), Query Frame = 1 Query: 4 AASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNAAFKNFLDLIPQVRELIHDFANSRYKACLGHLASIRGELDLDLHLHSHVTKLYKNIEDKCLMQYFSPYTSVKLSAMSESLGMQVPELEKKVAALIIGNQMLARIDSKNSTLHGKHADQRSTSYRKVLE 534 AA KFLEV P+LG +++ VI P+DV YGGLCALA+F R E+K +++DN F+NFL+L+P++RELIHDF S Y +CL +L +++ L LD+HLH HV LY I K L+QY P+ SV L+ M+ + V LEK++ ALI NQ+ ARIDS N L+ +HADQR+ +++KVL+ Sbjct: 233 AARKFLEVGPELGNNYTEVIAPQDVATYGGLCALASFDRAELKSKVIDNINFRNFLELVPEIRELIHDFYTSHYASCLEYLGNLKANLLLDIHLHDHVETLYDQIRSKALIQYTHPFVSVDLNMMANAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQ 409 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10190.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10190.1.1 >prot_D-mesarthrocarpus_Contig10190.1.1 ID=prot_D-mesarthrocarpus_Contig10190.1.1|Name=mRNA_D-mesarthrocarpus_Contig10190.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=178bp QAASKFLEVSPDLGTSFSGVIVPEDVGVYGGLCALATFHREEVKRRLLDNback to top mRNA from alignment at D-mesarthrocarpus_Contig10190:71..3179+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10190.1.1 ID=mRNA_D-mesarthrocarpus_Contig10190.1.1|Name=mRNA_D-mesarthrocarpus_Contig10190.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3109bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10190:71..3179+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10190:71..3179+ >mRNA_D-mesarthrocarpus_Contig10190.1.1 ID=mRNA_D-mesarthrocarpus_Contig10190.1.1|Name=mRNA_D-mesarthrocarpus_Contig10190.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=534bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10190:71..3179+ (Discosporangium mesarthrocarpum MT17_79)back to top |