mRNA_D-mesarthrocarpus_Contig1019.3.3 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Match: A0A6A7GA17_9CRUS (Cholesterol 25-hydroxylase (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7GA17_9CRUS) HSP 1 Score: 203 bits (517), Expect = 3.170e-56 Identity = 102/266 (38.35%), Postives = 155/266 (58.27%), Query Frame = 1 Query: 49 LWVARLLVSLVIVSVVYQCRAVDELIANLWAQLRTSWLVRHDSFEPCLSTCCFYIYISFFAVLDHFVPSAWGYRLNPS--KDMSSYRTGT-RNRDQFFWYVLPFLVIDYVFPRRVLEKEPPTTLRLFLEVVGAIAVYDVAFFCWHTAVHSLPSLYLGVHAKHHRSAVQRAPEAVQHTFLDGTMDVMCSIFALNALHCHSLSRAVYDLVIIFFITELHAGYDFPWQLHNVVPFGLLGGPVRHQQHHCDGRFYRQKFGTYLDYLFGSV 837 +W+ R + VI + +DE + W RT+++ +HDSFEP + F++ SF+ +D P Y+ + +D ++R R + +F YV P L+ D+++PRR L + + RL+ EV + +YD FF H +H +P+++ +HA+HH +A + ++ +F + ++V CSI A+N H LSRAVY++VII + ELH GYD PW L NVVPFG++GG VRH +HH G Y QKF TYLD LFG V Sbjct: 23 VWLTRGFYACVISLSLRHVTVLDEALRWFWESARTTFIWKHDSFEPFIVVSTFFLVFSFWGAIDKLCPQFHKYKFHAHIVEDWKTFRFPVDRIKSEFIGYVAPLLIFDFLYPRRRLPADSVSFGRLWFEVTLCLLIYDALFFVAHWLLHIIPTVFRAIHARHHDMIPIKALDTIRLSFAEQIINVSCSIIAVNVSGSHPLSRAVYNIVIICLLVELHCGYDMPWMLQNVVPFGIIGGSVRHDRHHVVGTVYYQKFFTYLDNLFGFV 288
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Match: A0A1Y1I1Z9_KLENI (Cholesterol 25-hydroxylase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1Z9_KLENI) HSP 1 Score: 199 bits (506), Expect = 8.200e-55 Identity = 103/255 (40.39%), Postives = 160/255 (62.75%), Query Frame = 1 Query: 58 ARLLVSLVIVSVVYQCRAVDELIANLWAQLRTSWLVRHDSFEPCLSTCCFYIYISFFAVLDHFVPSAWGYRLNPSKDMSSYRTGTRNRDQFFWYVLPFLVIDYVFPRRVLEKEPPTTLRLFLEVVGAIAVYDVAFFCWHTAVHSLPSLYLGVHAKHH-RSAVQRAPEAVQHTFLDGTMDVMCSIFALNALHCHSLSRAVYDLVIIFFITELHAGYDFPWQLHNVVPFGLLGGPVRHQQHHCDGRFYRQKFGTYLD 819 AR + L+I +V + ++ + +A +W R+ LV+HDSFEP ++ F+I+ + VLD +VPS Y+L+ S ++ +++ R + +Y+ P LV D+++PRR L++ PP+ R+ +V+GA+ +YD+ FF H A+H +P L HA+HH RA +A + L+ V +I +LN L CH LSR ++++ I + +TE+H+GYDFPW LH VVPF L+GG VRH QHH G Y Q+F TYLD Sbjct: 7 ARGCICLLIAAVAFYHKSANAAVAAVWDTYRSIPLVQHDSFEPLVAVTAFFIWTRMWHVLDVYVPSLRVYKLHLSHNIKAWKLEGYPRWEAVYYLAPLLVFDWIYPRRKLDQPPPSVERVVFDVIGALLIYDLLFFFSHLALHKVPFLRR-FHARHHVMGGDMRACDATRAHPLEELALVTFAITSLNLLRCHFLSRFIFNITIGYMLTEVHSGYDFPWMLHRVVPFKLVGGSVRHGQHHAKGDRYYQQFFTYLD 260
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Match: A0A7S2S5J1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S5J1_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.770e-46 Identity = 91/239 (38.08%), Postives = 138/239 (57.74%), Query Frame = 1 Query: 109 AVDELIANLWAQLRTSWLVRHDSFEPCLSTCCFYIYISFFAVLDHFVPSAWGYRLNPSKDMSSYRTGTRNRDQF-FWYVLPFLVIDYVFPRRVLEKEPPTTL-RLFLEVVGAIAVYDVAFFCWHTAVHSLPSLYLGVHAKHHRSAVQRAPEAVQHTFLDGTMDVMCSIFALNALHCHSLSRAVYDLVIIFFITELHAGYDFPWQLHNVVPFGLLGGPVRHQQHHCDGRFYRQKFGTYLD 819 ++D + W+ ++ +HD+FEP ++T F ++I F +LD + Y ++P R G + + Y+ D+++PRR L P ++ L +V A+ VYD FF H A+H + L H KHH + E ++H+F+DG++ VMC+I ALN L H SR +Y++V+ + +TE+H GYD PW LHNV+PFGLLGG VRH++HH GR Y Q+F TYLD Sbjct: 2 SIDSAVERSWSWIKEKQWFQHDTFEPLVATLSFAVWIHAFRILD--LMPLGQYIIDPKYRALDARVGFGVKVKSGLVYLGTLFTFDFLYPRRKLPDTCPGGAGKVLLHIVLALFVYDFLFFHIHVAMHKVEGLR-SFHKKHHSVRGLHSTEVLRHSFVDGSLQVMCNIAALNLLKLHPYSRTLYNIVVTYMLTEIHCGYDLPWMLHNVIPFGLLGGSVRHEEHHITGRRYFQQFFTYLD 237
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Match: A0A7S0SGA9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SGA9_9CHLO) HSP 1 Score: 172 bits (435), Expect = 2.550e-44 Identity = 95/268 (35.45%), Postives = 143/268 (53.36%), Query Frame = 1 Query: 55 VARLLVSLVIVSVVYQCRAVDELIANLWAQLRTSWLVRHDSFEPCLSTCCFYIYISFFAVLD--HFVPSAWG--YRLNPS---------KDMSSYRTGTRNRDQFFWYVLPFLVIDYVFPRRVLEKEPPTTLRLFLEVVGAIAVYDVAFFCWHTAVHSLPSLYLGVHAKHHRSAVQRAPEAVQHTFLDGTMDVMCSIFALNALHCHSLSRAVYDLVIIFFITELHAGYDFPWQLHNVVPFGLLGGPVRHQQHHCDGRFYRQKFGTYLD 819 + RL+ +++ V +D +A+ WA R + L++ D+FEP L F I++ + +D + AW YRL P ++ +F Y++P L D+++PRRVL + PT + EV+G + +YD F HT +H +P L+ VHAKHH RA E + + + D CSI AL H LSRAVY++VI+F + E+H+GYD PWQL NVVP G++ G +H +HH GR KF ++LD Sbjct: 18 LCRLVCVMLVAGVCAHAEQLDACVADFWAWARETRLMKWDTFEPALVMTVFTIFLLSWQSIDLGRWGSHAWSARYRLQPGGPEGKTHAEHSRKIWKAEGYGAQEFLLYLVPLLAFDWLYPRRVLPTQAPTVAGMAAEVLGTLVLYDALFTASHTVMHGVPWLFKRVHAKHHLHRHVRAREIFRLSAPEEVADTGCSILALTLTRAHPLSRAVYNVVIVFLLCEIHSGYDMPWQLCNVVPGGVVMGSRQHVEHHATGRGAYAKFFSFLD 285
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Match: A0A7S2UXV7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXV7_9STRA) HSP 1 Score: 163 bits (413), Expect = 8.220e-43 Identity = 82/192 (42.71%), Postives = 110/192 (57.29%), Query Frame = 1 Query: 319 RDQFFWYVLPFLVIDYVFPRRVL----EKEPPTTLRLFLEVVGAIAVYDVAFFCWHTAVHSLPS------------------LYLGVHAKHHRSAVQRAPEAVQHTFLDGTMDVMCSIFALNALHCHSLSRAVYDLVIIFFITELHAGYDFPWQLHNVVPFGLLGGPVRHQQHHCDGRFYRQKFGTYLDYLF 828 +++ WY+ P + D + PRR L + P+ L + ++ ++ YDV FF H +H P LY +HAKHH RA EAV+HTFLDG+M V CSI AL H L+RA++++V+I +TELHAGYD PW LHNV+P G+LGGP RH HH G Y Q+ GTYLD+ F Sbjct: 2 QEELIWYIFPLVAFDLILPRRHLLLENHADSPSALVVLWQLACSLFWYDVLFFFLHAFLHLGPGFLWGSGSKSGGVKESVGWLYRTIHAKHHSQPHLRACEAVRHTFLDGSMTVGCSILALKLAGSHPLARALHNIVLIGLLTELHAGYDLPWALHNVMPAGILGGPPRHDDHHRTGTRYYQQLGTYLDWFF 193
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Match: A0A7S2MS10_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MS10_9STRA) HSP 1 Score: 154 bits (389), Expect = 8.040e-39 Identity = 79/178 (44.38%), Postives = 106/178 (59.55%), Query Frame = 1 Query: 337 YVLPFLVIDYVFPRRVLEKE---PPTTLRLFLEVVGAIAVYDVAFFCWHTAVHSLPSLYLGVHAKHHRSAVQRAPEAVQHTFLDGTMDVMCSIFALNALHCHSLSRAVYDLVIIFFITELHAGYDFPWQLHNVVPFGLLGGPVRHQQHHCDGRFYRQKFGTYLDYLFGSVPPATELAK 861 YVL + D PRR + PT L + EV+G++ +YD+ FF H +H +P LY VHAKHHRS+ RA + V +F++ +DV SIFALN L CH +SR +Y+++I F +TELH G+ FPW VVPFGL G H HH +G Y QKF ++D LFG V + K Sbjct: 65 YVLXLYIWDICIPRRAAKIAIWGAPTALGICKEVMGSLLLYDLGFFVCHYLMHKVPLLYKYVHAKHHRSSEVRASDIVNLSFVEEIVDVGISIFALNFLGCHPISRTLYNIIITFMLTELHCGFAFPWTPQFVVPFGLATGSKGHHYHHRNGYHYYQKFFCHVDRLFGFVQKEDDTIK 242
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Match: UPI001EE5E4AC (cholesterol 25-hydroxylase-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE5E4AC) HSP 1 Score: 129 bits (323), Expect = 3.560e-29 Identity = 79/278 (28.42%), Postives = 127/278 (45.68%), Query Frame = 1 Query: 55 VARLLVSLVIVSVVYQCRAVDELIANLWAQLRTSWLVRHDSFEPCLSTCCFYIYISFFAVLDHFVPSAWGYRLNPSKDMSSYRTGTRNRDQFFWYVLPFLVID---------------------YVFPRRVLEKEPPTTLRLFLEVVGAIAVYDVAFFCWHTAVHSLPSLYLGVHAKHHRSAVQRAPEAVQHTFLDGTMDVMCSIFALNALHCHSLSRAVYDLVIIFFITELHAGYDFPWQLHNVVPFGLLGGPVRHQQHHCDGRFYRQKFGTYLDYL 825 + R +++L + VY + + W L S L FE L+T C+ + I + H++ S Y++ PS D Y P +++D ++ R L +PP+ L +++ ++ +YD FF H A+H LY HA HH V A Q T + ++ + FAL + H ++RA++ V I+ + + H GYD PW LH +VPFG++GGP +H HH +G+ + Q F TYLD L Sbjct: 31 IIRGVIALTAAACVYYYDPIQRWTNSAWYWLLQSSLFNSVYFESWLATFCYAVLIPIYPYALHYMKSLNKYKVRPSVTYEHQSIAGMLLDAVI-YTAPLMLLDTFIVKKYHGVDPEIWVEKRKSWIQTTRALPLDPPSFSGLVFDLIASVLLYDAMFFFLHFALHKNFWLYKTFHALHHDHDVMHAHVTNQLTVGERLALILSANFALKVFNSHPVTRALFVPVFIYLLIDNHTGYDLPWGLHKIVPFGIMGGPRKHYAHHLEGKRHYQPFLTYLDNL 307
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Match: A0A0L0FVG3_9EUKA (Fatty acid hydroxylase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FVG3_9EUKA) HSP 1 Score: 128 bits (321), Expect = 1.400e-28 Identity = 90/308 (29.22%), Postives = 137/308 (44.48%), Query Frame = 1 Query: 52 WVARLLVSLVIVSVVYQCRAVDELIANLWAQLRTSWLVRHDSFEPCLSTCCFYIYISFFAVLDHFVPSAWGYRL---------------NPSKDMSSYRTGTRNRDQ---------------------------------FFWYVLPFLVIDYVFPRRVLEKE---PPTTLRLFLEVVGAIAVYDVAFFCWHTAVHSLPSLYLGVHAKHHR-SAVQRAPEAVQHTFLDGTMDVMCSIFALNALHCHSLSRAVYDLVIIFFITELHAGYDFPWQLHNVVPFGLLGGPVRHQQHHCDGRFYRQKFGTYLD 819 W RL + + V VY +D +I N+W QL S L DSFEP ++ F +I + + D W + N M+ RN Q +++P D +FPRR + + P+ R+ EVV A+ +YD F+ WH +HS +Y VHA HH+ ++ A E ++ + ++ +D + S+ LN L CH LSR +++VI++ +TELH G D+PW HNV+PF L+ GP H +HH KF T+ D Sbjct: 41 WFIRLSLVSLAVCYVYNPTIMDAVIGNVWLQLLDSPLYMWDSFEPTVAVLSFVFFIFAWWLHDFGARFYWHKLMCVVQRCMGKGSTGLDNLCVTMNDRTATKRNSGQRQKRIPDELRPMHKAWHTRAAVPMAEYAQYAFIAVMFLVPLYAFDLLFPRRHMRLDGVGAPSFGRVCCEVVCALLLYDSIFYFWHRFMHSDARVYRIVHAVHHKYTSPITARETIRLSVVELWVDSIISVVTLNVLFCHPLSRCTFNVVIVYLLTELHCGCDYPWMPHNVIPFNLVTGPKIHGKHHRLPNRAFAKFFTHWD 348
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Match: A0A6P7JBS7_9TELE (cholesterol 25-hydroxylase-like protein 2 n=8 Tax=Percomorphaceae TaxID=1489872 RepID=A0A6P7JBS7_9TELE) HSP 1 Score: 115 bits (288), Expect = 1.050e-24 Identity = 80/262 (30.53%), Postives = 123/262 (46.95%), Query Frame = 1 Query: 115 DELIANLWAQLRTSW--LVRHDSFEPCLSTCCFYIYISFFAVLDHFVPSAWG----YRLNPSKDMSSYRTGTR---NRDQFFWYVLPFLVIDYVF-PRRVLEKEPPTTLRLFLEVVGAIAVYDVAFFCWHTAVHSLPSLYLGVHAKHHRSAVQRAPEAVQHTFLDGTMDVMCSIFALN---ALHCHSLSRAVYDLVIIFFITELHAGYDFPWQLHNVVPFGLLGGPVRHQQHHCDGRFYRQKFGTYLDYLFGS--VPPATEL 855 D ++ W L+ + +R F LS ++I + + VLD P+ W YRL+P + ++ T YV P V +++ P L +E PT L FL ++G + V+D ++ WH H +P LY HA HH+ P ++ +L G +A L CH L+ + + ++ TE H GYDFPW +HN+VPFGL GG +H HH F ++ D+L G+ VP A+ L Sbjct: 28 DLVLQPFWDYLQQNHHDFLRSPLFPVFLSVSTYFILVGLYTVLDLLAPT-WPSINRYRLHPDRPVTWPNIWTTLGVTMYNHLLYVFPAAVAQWLWRPPTPLPREAPTLLSFFLGILGCMVVFDFQYYLWHLLHHRIPWLYRTFHAVHHQ---YNQPFSLVTQYLSGWELFSVGFWATVDPILLQCHCLTTWSFMVFNVYVSTEDHCGYDFPWSVHNLVPFGLWGGAPKHDAHHQRPGTNFAPFFSHWDWLAGTHTVPTASSL 285
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Match: A0A484CER7_PERFV (Fatty acid hydroxylase domain-containing protein n=7 Tax=Percidae TaxID=8165 RepID=A0A484CER7_PERFV) HSP 1 Score: 112 bits (281), Expect = 5.820e-24 Identity = 80/256 (31.25%), Postives = 120/256 (46.88%), Query Frame = 1 Query: 160 LVRHDSFEPCLSTCCFYIYISFFAVLDHFVPSAWG----YRLNPSKDMS---SYRTGTRNRDQFFWYVLPFLVIDYVF-PRRVLEKEPPTTLRLFLEVVGAIAVYDVAFFCWHTAVHSLPSLYLGVHAKHHRSAVQRAPEAVQHTFLDGTMDVMCSIFALN--------ALHCHSLSRAVYDLVIIFFITELHAGYDFPWQLHNVVPFGLLGGPVRHQQHHCDGRFYRQKFGTYLDYLFGS--VP-PATELAKEVP 870 L+R LS ++ + + +LD P+ W YRL+P + ++ + T Y+ P V +++ P +L E PT FL ++G V+D ++ WH H +P LY VHA HH+ P ++ +L G C +F L L CH L+ + + I+ TE H GYDFPW +HN+VPFGL GGP +H HH F ++ D+L G+ VP P + A E P Sbjct: 25 LLRSPLCPVVLSVTTYFFVVGLYTLLDLLAPT-WPCINRYRLHPHRAVTWPNIWDTLGVTIYNHLLYIFPAAVAQWLWRPPSLLPCEAPTLRSFFLGILGCTLVFDFQYYLWHLLHHRIPWLYRTVHAVHHQ---YNQPFSLVTQYLSG-----CELFNLGFWATVDPIMLQCHCLTTWGFMVFNIYISTEDHCGYDFPWAIHNLVPFGLWGGPPKHDAHHQRPNTNFAPFFSHWDWLGGTHTVPTPLSHAAVEEP 271 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1019.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1019.3.3 >prot_D-mesarthrocarpus_Contig1019.3.3 ID=prot_D-mesarthrocarpus_Contig1019.3.3|Name=mRNA_D-mesarthrocarpus_Contig1019.3.3|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=297bp MRNCSWNTQLWVARLLVSLVIVSVVYQCRAVDELIANLWAQLRTSWLVRHback to top mRNA from alignment at D-mesarthrocarpus_Contig1019:20869..24958- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1019.3.3 ID=mRNA_D-mesarthrocarpus_Contig1019.3.3|Name=mRNA_D-mesarthrocarpus_Contig1019.3.3|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4090bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1019:20869..24958- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1019:20869..24958- >mRNA_D-mesarthrocarpus_Contig1019.3.3 ID=mRNA_D-mesarthrocarpus_Contig1019.3.3|Name=mRNA_D-mesarthrocarpus_Contig1019.3.3|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=891bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1019:20869..24958- (Discosporangium mesarthrocarpum MT17_79)back to top |