mRNA_D-mesarthrocarpus_Contig10186.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Match: D7FME5_ECTSI (5'-3' exoribonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME5_ECTSI) HSP 1 Score: 226 bits (575), Expect = 7.060e-70 Identity = 111/120 (92.50%), Postives = 116/120 (96.67%), Query Frame = 1 Query: 1 MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSEREIMLGVFQYIDRIVTHIARPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMAEAKKLAESK 360
MGVPKFYRWISERYPKINQI+SDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSER+I+LG+F YIDRIVTHI RPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDM EAK +AESK
Sbjct: 1 MGVPKFYRWISERYPKINQIVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLIAESK 120
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Match: A0A835Z4G8_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G8_9STRA) HSP 1 Score: 201 bits (512), Expect = 9.560e-58 Identity = 96/113 (84.96%), Postives = 104/113 (92.04%), Query Frame = 1 Query: 1 MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSEREIMLGVFQYIDRIVTHIARPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMAEA 339
MGVPKFYRW+SERYPKINQI+SD++L+PEFDNLYLDMNGILH CTHPNDD LS QLSER++ LGVF YIDRIVTHI RPRRVLYMAIDGVAPRAKMNQQRSRRFR+ KD A A
Sbjct: 1 MGVPKFYRWLSERYPKINQIVSDTSLIPEFDNLYLDMNGILHGCTHPNDDSLSKQLSERDVFLGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRSAKDAAAA 113
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Match: A0A7S1XZW9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZW9_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.390e-54 Identity = 84/120 (70.00%), Postives = 104/120 (86.67%), Query Frame = 1 Query: 1 MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSEREIMLGVFQYIDRIVTHIARPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMAEAKKLAESK 360
MGVPKFYRW+SER+PKIN +ISD TLLPEFDN+YLDMNGILH CTHP+DD LS + ERE++L +F+Y+DR++T I +PR+++YMA+DGVAPRAKMNQQRSRRFR+ KD A LAE+K
Sbjct: 1 MGVPKFYRWLSERFPKINTVISDLTLLPEFDNMYLDMNGILHGCTHPSDDELSKERPEREVVLALFKYLDRLITGIVKPRKIVYMALDGVAPRAKMNQQRSRRFRSAKDRMAA--LAEAK 118
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Match: A0A7S2UCD1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UCD1_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.070e-54 Identity = 83/113 (73.45%), Postives = 99/113 (87.61%), Query Frame = 1 Query: 1 MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSEREIMLGVFQYIDRIVTHIARPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMAEA 339
MGVPKFYRWISERYPKINQ+I+D+ LLPEFD+LYLDMNGI+H CTHPN +S LSER++MLG+ Y+DRIVT I +P+ +YMAIDGVAPRAK+NQQRSRRFR+ KD+AEA
Sbjct: 1 MGVPKFYRWISERYPKINQVITDTALLPEFDHLYLDMNGIIHGCTHPNHLDVSDVLSERDMMLGIMHYLDRIVTQIVKPQVSVYMAIDGVAPRAKLNQQRSRRFRSAKDLAEA 113
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Match: A0A7S4DF97_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DF97_HETAK) HSP 1 Score: 172 bits (437), Expect = 1.320e-53 Identity = 81/113 (71.68%), Postives = 97/113 (85.84%), Query Frame = 1 Query: 1 MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSEREIMLGVFQYIDRIVTHIARPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMAEA 339
MGVPKFYRW+SERYP INQ+ISD TLLPEFDNLYLDMNGILH C+HP D ++ LS+R+IML +F YIDRIVT I RP+++L++A+DG APRAK+NQQRSRRFR+ KD EA
Sbjct: 1 MGVPKFYRWLSERYPLINQLISDETLLPEFDNLYLDMNGILHNCSHPGDG--ASHLSDRDIMLSIFSYIDRIVTQIVRPKKILFLAVDGCAPRAKLNQQRSRRFRSAKDAREA 111
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Match: A0A1Z5JKV0_FISSO (5'-3' exoribonuclease 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKV0_FISSO) HSP 1 Score: 174 bits (440), Expect = 5.750e-48 Identity = 82/113 (72.57%), Postives = 98/113 (86.73%), Query Frame = 1 Query: 1 MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSEREIMLGVFQYIDRIVTHIARPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMAEA 339
MGVPKFYRW+SERYPKINQIISD+ LLPEFD+LYLDMNGI+H CTHP+ +S LSER++MLG+ Y+DRI+T I +P+ +YMAIDGVAPRAK+NQQRSRRFR+ KD AEA
Sbjct: 1 MGVPKFYRWLSERYPKINQIISDNALLPEFDHLYLDMNGIIHGCTHPSHMDISDVLSERDMMLGIMHYLDRIITQIVKPKVSVYMAIDGVAPRAKLNQQRSRRFRSAKDTAEA 113
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Match: A0A7S4RC29_9STRA (5'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC29_9STRA) HSP 1 Score: 174 bits (440), Expect = 5.750e-48 Identity = 81/113 (71.68%), Postives = 99/113 (87.61%), Query Frame = 1 Query: 1 MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSEREIMLGVFQYIDRIVTHIARPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMAEA 339
MGVPKFYRWISERYPKINQ+I+DS LLPEFD+LYLDMNGI+H CTHP+ +S LSER++M+G+ Y+DRI+T I +P+ +YMAIDGVAPRAK+NQQRSRRFR+ KD+AEA
Sbjct: 1 MGVPKFYRWISERYPKINQVITDSALLPEFDHLYLDMNGIIHGCTHPSHLDVSDVLSERDMMMGIMHYLDRIITQIVKPKVSVYMAIDGVAPRAKLNQQRSRRFRSAKDLAEA 113
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Match: A0A448ZS96_9STRA (5'-3' exoribonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS96_9STRA) HSP 1 Score: 174 bits (440), Expect = 5.750e-48 Identity = 82/113 (72.57%), Postives = 98/113 (86.73%), Query Frame = 1 Query: 1 MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSEREIMLGVFQYIDRIVTHIARPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMAEA 339
MGVPKFYRWISERY KIN+I+SDS LLPEFD+LYLDMNGI+H CTHP+ +S +SER++MLG+ Y+DRI+T I +PR +YMAIDGVAPRAK+NQQRSRRFR+ KDMAEA
Sbjct: 1 MGVPKFYRWISERYTKINEIVSDSALLPEFDHLYLDMNGIIHGCTHPSHMDISDVISERDMMLGIMHYLDRIITQIVKPRVSVYMAIDGVAPRAKLNQQRSRRFRSAKDMAEA 113
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Match: A0A7S4EG33_9STRA (5'-3' exoribonuclease 1 n=4 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG33_9STRA) HSP 1 Score: 174 bits (440), Expect = 5.750e-48 Identity = 82/113 (72.57%), Postives = 98/113 (86.73%), Query Frame = 1 Query: 1 MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSEREIMLGVFQYIDRIVTHIARPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMAEA 339
MGVPKFYRWISERY KIN+I+SDS LLPEFD+LYLDMNGI+H CTHP+ +S +SER++MLG+ Y+DRI+T I +PR +YMAIDGVAPRAK+NQQRSRRFR+ KDMAEA
Sbjct: 1 MGVPKFYRWISERYTKINEIVSDSALLPEFDHLYLDMNGIIHGCTHPSHMDISDVISERDMMLGIMHYLDRIITQIVKPRVSVYMAIDGVAPRAKLNQQRSRRFRSAKDMAEA 113
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Match: A0A7S1C2Z7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2Z7_9STRA) HSP 1 Score: 167 bits (423), Expect = 5.900e-48 Identity = 81/111 (72.97%), Postives = 100/111 (90.09%), Query Frame = 1 Query: 1 MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSEREIMLGVFQYIDRIVTHIARPRRVLYMAIDGVAPRAKMNQQRSRRFRARKDMA 333
MGVPKFYRW+SERYP INQ ++D+TL+PEFDNLYLDMNGI+HT TH ND GLSA+++E+E+ML +F+YIDR+V I +P ++LYMA+DGVAPRAKMNQQRSRRFRA +DMA
Sbjct: 1 MGVPKFYRWLSERYPLINQPLADNTLMPEFDNLYLDMNGIIHTATHGND-GLSAKITEKELMLSMFRYIDRMVK-IVKPTQLLYMAVDGVAPRAKMNQQRSRRFRAARDMA 109 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10186.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10186.1.1 >prot_D-mesarthrocarpus_Contig10186.1.1 ID=prot_D-mesarthrocarpus_Contig10186.1.1|Name=mRNA_D-mesarthrocarpus_Contig10186.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=120bp MGVPKFYRWISERYPKINQIISDSTLLPEFDNLYLDMNGILHTCTHPNDDback to top mRNA from alignment at D-mesarthrocarpus_Contig10186:351..1335- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10186.1.1 ID=mRNA_D-mesarthrocarpus_Contig10186.1.1|Name=mRNA_D-mesarthrocarpus_Contig10186.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=985bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10186:351..1335- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10186:351..1335- >mRNA_D-mesarthrocarpus_Contig10186.1.1 ID=mRNA_D-mesarthrocarpus_Contig10186.1.1|Name=mRNA_D-mesarthrocarpus_Contig10186.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=360bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10186:351..1335- (Discosporangium mesarthrocarpum MT17_79)back to top |