mRNA_D-mesarthrocarpus_Contig1018.5.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Match: D8LNX4_ECTSI (ATP-dependent protease peptidase subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNX4_ECTSI) HSP 1 Score: 254 bits (650), Expect = 2.540e-83 Identity = 134/182 (73.63%), Postives = 155/182 (85.16%), Query Frame = 1 Query: 1 MHGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVLDEG-VLAGYAGSTADAFTLIERLESKLEENEGQLVRACVSLATDWRTDKYLRRLEATLVVADSRRTFQVTGLGDVLEPRGGTVAVGSGQPYALAAARALMLQEGLNAREVAQTAMEIAAELCVYTNSNFTSVELEDKSDEPE 543
MHGTTILCVRK GKVV+MGDGQVSQGDMVVK NA KVR L +G VLAGYAGSTADA TL+ERLE KLEE+EGQL+ ACV+LA DWRTDKYLRRLEA ++VADS+ + +VTGLGDVL P GG +AVGSGQPYALAAARAL QE L+A EVA+ +MEIA+ELCVYTN++FT L+ + +E E
Sbjct: 30 MHGTTILCVRKNGKVVMMGDGQVSQGDMVVKPNATKVRKLGDGRVLAGYAGSTADALTLMERLEGKLEEHEGQLMNACVALAKDWRTDKYLRRLEAVVLVADSKFSLKVTGLGDVLAPNGGVIAVGSGQPYALAAARALSGQEDLSAEEVARKSMEIASELCVYTNNHFTMHSLDVEEEESE 211
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Match: A0A4D9D968_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D968_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.780e-72 Identity = 119/183 (65.03%), Postives = 145/183 (79.23%), Query Frame = 1 Query: 1 MHGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVLDEGVLAGYAGSTADAFTLIERLESKLEENEGQLVRACVSLATDWRTDKYLRRLEATLVVADSRRTFQVTGLGDVLEPRGGTVAVGSGQPYALAAARALMLQEGLNAREVAQTAMEIAAELCVYTNSNF-TSVELEDKSDEPEE 546
MH TTILCVRK KVV+MGDGQVSQG VVK NA KVR L + ++AG+AGSTAD FTL+ERLE KLEE+ GQL RACV LA WRTDKYLRRLEA+L+VAD +F++TGLGDVLEP+ G +A+GSG +ALAAA+AL+ +E ++A ++A AM IAAE+CVYTN+NF T V DK +E E
Sbjct: 1 MHATTILCVRKGDKVVMMGDGQVSQGATVVKPNAKKVRRLGQDIIAGFAGSTADCFTLMERLERKLEEHPGQLTRACVDLAKAWRTDKYLRRLEASLLVADKNVSFEITGLGDVLEPKDGVIAIGSGGTFALAAAKALLDREDMDAEQIAHKAMSIAAEICVYTNNNFVTEVVGGDKKNESAE 183
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Match: A0A7S2WBX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBX0_9STRA) HSP 1 Score: 227 bits (579), Expect = 2.100e-72 Identity = 119/173 (68.79%), Postives = 139/173 (80.35%), Query Frame = 1 Query: 4 HGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVLDEGVLAGYAGSTADAFTLIERLESKLEENEGQLVRACVSLATDWRTDKYLRRLEATLVVADSRRTFQVTGLGDVLEPRGGTVAVGSGQPYALAAARALMLQEGLNAREVAQTAMEIAAELCVYTNSNFTSVELE 522
HGTTILCVRK+GKVV++GDGQVSQG MVVK NA KVR + +GVL G+AGSTADAFTL+ERLE +LEE+ GQL RACV LA WRTDKYLRRLEA L+VAD +F++TG GDVLEP+ G +AVGSG YALAAARAL ++ ++AQ AM IAA+LCVYTN NFT LE
Sbjct: 35 HGTTILCVRKEGKVVVIGDGQVSQGSMVVKPNAKKVRRMGDGVLVGFAGSTADAFTLLERLEERLEEHPGQLTRACVDLAKAWRTDKYLRRLEAVLLVADKDVSFELTGNGDVLEPKDGIMAVGSGGAYALAAARALADVPDMDPEDIAQKAMTIAADLCVYTNHNFTVEVLE 207
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Match: W7UCI7_9STRA (Heat shock protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UCI7_9STRA) HSP 1 Score: 227 bits (579), Expect = 8.560e-72 Identity = 120/183 (65.57%), Postives = 145/183 (79.23%), Query Frame = 1 Query: 1 MHGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVLDEGVLAGYAGSTADAFTLIERLESKLEENEGQLVRACVSLATDWRTDKYLRRLEATLVVADSRRTFQVTGLGDVLEPRGGTVAVGSGQPYALAAARALMLQEGLNAREVAQTAMEIAAELCVYTNSNF-TSVELEDKSDEPEE 546
MH TTILCVRK KVV+MGDGQVSQG VVK NA KVR L E ++AG+AGSTAD FTL+ERLE KLEE+ GQL RACV LA WRTDKYLRRLEA+L+VAD +F++TGLGDVLEP+ G +A+GSG +ALAAA+AL+ +E ++A ++A AM IAAE+CVYTN+NF T V DK +E E
Sbjct: 82 MHATTILCVRKGDKVVMMGDGQVSQGATVVKPNAKKVRRLGEDIIAGFAGSTADCFTLMERLERKLEEHPGQLTRACVDLAKAWRTDKYLRRLEASLLVADKNVSFEITGLGDVLEPKDGVIAIGSGGTFALAAAKALLDREDMDAEQIAHKAMSIAAEICVYTNNNFVTEVVGGDKKNESAE 264
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Match: A0A7S4E4R6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4R6_9STRA) HSP 1 Score: 224 bits (570), Expect = 3.520e-71 Identity = 117/184 (63.59%), Postives = 143/184 (77.72%), Query Frame = 1 Query: 1 MHGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVLDEGVLAGYAGSTADAFTLIERLESKLEENEGQLVRACVSLATDWRTDKYLRRLEATLVVADSRRTFQVTGLGDVLEPRGGTVAVGSGQPYALAAARALMLQEGLNAREVAQTAMEIAAELCVYTNSNFTSVELEDKSDEPEEDD 552
MHGTTILCVR+KG+V L+GDGQVS G +VVK NA KVR + + VL G+AGSTADAF+L++RLE KLEE+ GQL R+CV LA WRTDKYLRRLEA L+V D +TF++TG GDVLEP G + VGSG YALAAARAL E L AR++A AM +AA++CVYTN+NF EL++ + PE DD
Sbjct: 22 MHGTTILCVRRKGRVCLIGDGQVSMGSIVVKGNAKKVRRVGDDVLVGFAGSTADAFSLLDRLEKKLEEHPGQLARSCVELAKAWRTDKYLRRLEAVLLVTDRTQTFELTGTGDVLEPSDGIMGVGSGGHYALAAARALATVEDLEARDIATRAMAVAADMCVYTNTNFIVEELDEVA--PEGDD 203
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Match: A0A7S2D616_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D616_9STRA) HSP 1 Score: 224 bits (571), Expect = 5.050e-71 Identity = 121/187 (64.71%), Postives = 148/187 (79.14%), Query Frame = 1 Query: 4 HGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVLDEGVLAGYAGSTADAFTLIERLESKLEENEGQLVRACVSLATDWRTDKYLRRLEATLVVADSRRTFQVTGLGDVLEPR---GGT--VAVGSGQPYALAAARALMLQEGLNAREVAQTAMEIAAELCVYTNSNFTSVELEDKSDEPEED 549
HGTTILCVRK+GK VL+GDGQVSQG +VVK NA KVR L+ GVLAG+AGSTADAFTL+ERLE +LEE+ GQL RACV LA WRTDKYLRRLEA L+V DS+ F++TG GDVLEPR GG + VGSG YAL+AARAL G++A +A+ +ME+AA++CVYTN NF +E D++D+ +ED
Sbjct: 37 HGTTILCVRKEGKTVLIGDGQVSQGSIVVKPNAKKVRRLEGGVLAGFAGSTADAFTLLERLEERLEEHPGQLTRACVDLAKAWRTDKYLRRLEAVLLVCDSKVAFEITGNGDVLEPRETEGGVSVMGVGSGGAYALSAARALADMPGVDAETIARKSMEVAADMCVYTNHNFV-IETLDENDDGKED 222
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Match: A0A2D4BQG1_PYTIN (ATP-dependent protease subunit HslV n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQG1_PYTIN) HSP 1 Score: 223 bits (569), Expect = 6.900e-71 Identity = 116/181 (64.09%), Postives = 144/181 (79.56%), Query Frame = 1 Query: 1 MHGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVLDEGVLAGYAGSTADAFTLIERLESKLEENEGQLVRACVSLATDWRTDKYLRRLEATLVVADSRRTFQVTGLGDVLEPRGGTVAVGSGQPYALAAARALMLQEGLNAREVAQTAMEIAAELCVYTNSNFTSVELEDKSDEPE 543
MHGTTILCVRK KV ++GDGQVS G VVK NA KVR ++E ++AG+AGSTADA+TL+ERLESKLEE GQL RACV LA WRTDKYLRRLEA LVV+D ++++ +TG GDV+EP G + +GSG YALAAARAL+ Q L+A +VA+ AM IAAE+CVYTN+NF +E+K+D+ E
Sbjct: 41 MHGTTILCVRKDNKVCIIGDGQVSLGHTVVKPNAKKVRRINENIVAGFAGSTADAYTLMERLESKLEEYPGQLTRACVELAKAWRTDKYLRRLEAILVVSDHKQSYTLTGNGDVVEPHDGIIGIGSGGTYALAAARALIDQPHLDAEQVARKAMVIAAEICVYTNNNFVVELIEEKADKTE 221
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Match: A0A6G0WXK0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXK0_9STRA) HSP 1 Score: 223 bits (567), Expect = 8.820e-71 Identity = 113/181 (62.43%), Postives = 144/181 (79.56%), Query Frame = 1 Query: 1 MHGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVLDEGVLAGYAGSTADAFTLIERLESKLEENEGQLVRACVSLATDWRTDKYLRRLEATLVVADSRRTFQVTGLGDVLEPRGGTVAVGSGQPYALAAARALMLQEGLNAREVAQTAMEIAAELCVYTNSNFTSVELEDKSDEPE 543
MHGTTILCVRK GKVV++GDGQVS G +VK NA KVR +++ V+AG+AGSTADAFTLIERLESKLEE GQL RACV LA WRTDKYLR LEA L+V D++++F +TG GDVL+P G + +GSG YALAAARAL+ + L+A EVA+ +M+IAA++C+YTN NF L++++ + E
Sbjct: 27 MHGTTILCVRKNGKVVVIGDGQVSLGHTIVKPNAQKVRRINDNVIAGFAGSTADAFTLIERLESKLEEYPGQLTRACVELAKAWRTDKYLRALEALLIVTDNKQSFTLTGNGDVLQPHDGIIGIGSGGTYALAAARALIEEPHLSAEEVARRSMKIAADICIYTNHNFVMEVLDEEAPQKE 207
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Match: A0A448ZTC4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTC4_9STRA) HSP 1 Score: 223 bits (569), Expect = 2.110e-70 Identity = 117/199 (58.79%), Postives = 143/199 (71.86%), Query Frame = 1 Query: 4 HGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVL-----------------DEGVLAGYAGSTADAFTLIERLESKLEENEGQLVRACVSLATDWRTDKYLRRLEATLVVADSRRTFQVTGLGDVLEPRGGTVAVGSGQPYALAAARALMLQEGLNAREVAQTAMEIAAELCVYTNSNFTSVELEDKSDEPEED 549
HGTTILCVRK GKV +MGDG VS G M+VK NAVK++ L + L G+AG+TADAFTL+ERLE KL+E GQL R+CV LA WRTDKYLRRLEA+L+VAD R+T ++TG GDVLE G V++GSG PYALAAARALM + ++A +VAQ AM++A+++CVYTN NF S LED D EED
Sbjct: 57 HGTTILCVRKNGKVCMMGDGMVSMGSMIVKPNAVKIQRLFPKGGLGSTVENKEEDEQKATLVGFAGATADAFTLLERLEGKLDEYPGQLSRSCVELAKGWRTDKYLRRLEASLIVADERKTLEITGNGDVLEMTDGVVSIGSGSPYALAAARALMSVDDMDAEDVAQKAMDVASDMCVYTNKNFLSYSLEDIGDTTEED 255
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Match: A0A3M6VMT3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VMT3_9STRA) HSP 1 Score: 221 bits (563), Expect = 6.600e-70 Identity = 115/183 (62.84%), Postives = 146/183 (79.78%), Query Frame = 1 Query: 1 MHGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVLDEGVLAGYAGSTADAFTLIERLESKLEENEGQLVRACVSLATDWRTDKYLRRLEATLVVADSRRTFQVTGLGDVLEPRGGTVAVGSGQPYALAAARALMLQEGLNAREVAQTAMEIAAELCVYTNSNFTSVELEDKSDEPEED 549
MHGTTILCVRK GKV L+GDGQVS GD VVK+NA KVR + E ++AG+AGSTADAFTL+ERLE+KL+E GQL R+CV LA DWRTDKYLRRLEA L+V+D ++++ +TG GDVLEP G + +GSG YALAAARAL+ Q+ L+A +A+ +M+IAA++CVYTN N LE+ D+ E+D
Sbjct: 40 MHGTTILCVRKGGKVCLIGDGQVSLGDTVVKANAKKVRRIGEHIVAGFAGSTADAFTLMERLEAKLDEYPGQLTRSCVELAKDWRTDKYLRRLEAILIVSDLKQSYTLTGNGDVLEPNDGIIGIGSGGTYALAAARALIDQD-LDAETIARKSMQIAADICVYTNGNVVVEMLEEGKDDGEKD 221 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1018.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1018.5.1 >prot_D-mesarthrocarpus_Contig1018.5.1 ID=prot_D-mesarthrocarpus_Contig1018.5.1|Name=mRNA_D-mesarthrocarpus_Contig1018.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=201bp MHGTTILCVRKKGKVVLMGDGQVSQGDMVVKSNAVKVRVLDEGVLAGYAGback to top mRNA from alignment at D-mesarthrocarpus_Contig1018:7830..14122+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1018.5.1 ID=mRNA_D-mesarthrocarpus_Contig1018.5.1|Name=mRNA_D-mesarthrocarpus_Contig1018.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=6293bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1018:7830..14122+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1018:7830..14122+ >mRNA_D-mesarthrocarpus_Contig1018.5.1 ID=mRNA_D-mesarthrocarpus_Contig1018.5.1|Name=mRNA_D-mesarthrocarpus_Contig1018.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=603bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1018:7830..14122+ (Discosporangium mesarthrocarpum MT17_79)back to top |