Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 613 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Ec32 ortholog description | Heat shock protein DnaJ, cysteine-rich domain |
| Ec32 ortholog | Ec-08_004890.1 |
| Cds size | 477 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789161.2757359-UTR-D-mesarthrocarpus_Contig1018:5585..5608 | 1680789161.2757359-UTR-D-mesarthrocarpus_Contig1018:5585..5608 | Discosporangium mesarthrocarpum MT17_79 | UTR | D-mesarthrocarpus_Contig1018 5586..5608 - |
| 1680789161.3331783-UTR-D-mesarthrocarpus_Contig1018:7029..7142 | 1680789161.3331783-UTR-D-mesarthrocarpus_Contig1018:7029..7142 | Discosporangium mesarthrocarpum MT17_79 | UTR | D-mesarthrocarpus_Contig1018 7030..7142 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789161.2881837-CDS-D-mesarthrocarpus_Contig1018:5608..5758 | 1680789161.2881837-CDS-D-mesarthrocarpus_Contig1018:5608..5758 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig1018 5609..5758 - |
| 1680789161.2996879-CDS-D-mesarthrocarpus_Contig1018:6203..6309 | 1680789161.2996879-CDS-D-mesarthrocarpus_Contig1018:6203..6309 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig1018 6204..6309 - |
| 1680789161.3074164-CDS-D-mesarthrocarpus_Contig1018:6449..6631 | 1680789161.3074164-CDS-D-mesarthrocarpus_Contig1018:6449..6631 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig1018 6450..6631 - |
| 1680789161.3154247-CDS-D-mesarthrocarpus_Contig1018:6990..7029 | 1680789161.3154247-CDS-D-mesarthrocarpus_Contig1018:6990..7029 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig1018 6991..7029 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1018.4.1 >prot_D-mesarthrocarpus_Contig1018.4.1 ID=prot_D-mesarthrocarpus_Contig1018.4.1|Name=mRNA_D-mesarthrocarpus_Contig1018.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=159bp
MGKKPSSSSEDGEGYASAMGDGRERKEKVESLEKLFATVTPEVPRIEVQS
EGLGRGTLPRKHRLQMKQQNLDLQWRMTEGGSVRSVCCRECAGTGLRECR
FCAGTGLLKVGEDLMTMTEHGGRIPACPVCQRGGEEKCKRCNGSGRLAGW
LFNLKRQA* back to topmRNA from alignment at D-mesarthrocarpus_Contig1018:5586..7142- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-mesarthrocarpus_Contig1018.4.1 ID=mRNA_D-mesarthrocarpus_Contig1018.4.1|Name=mRNA_D-mesarthrocarpus_Contig1018.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1557bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1018:5586..7142- (Discosporangium mesarthrocarpum MT17_79)
CCGAGACGTTGGGGAGGAAGTCTCTCGCGTTTACACCAGCAGCGCCAAGG
GTGGCAGGATCATTCAGACAGTCCCTTCAGGGGCCTCCGAGATTTACTCG
GGCACGTACTCGGATGGGGAAGAAACCCTCCTCATCGAGTGAAGACGGCG
AGGTGGGTTCCTTTCCTTATGTCTGTGTCGGCGTGTGTGGGCCTGGGTGG
AGTGCACGTCTTGCAAGGCCACGCATTTGGGCTTGACCAAAGGAATGAAC
GAAGTGCAATCCGAGGTGATGGGCAGAGCGCTATGGCTGAGTTTCCTTAA
CTGTGTATGGGGCCAAGGCAGACTCCCTCCAATCGTGTCTCGGATATCCT
GAAGATCTACGCTGAAACTGAACACCTCATCGACACTGGTGTTCCCTCTA
CACGCGAGGAACCGCCTCTCTCAGTTCCATCAGCCGCCTCTCATCCCTCA
CCTTCCTTTTTTGCCCTACACCCGGCATGAAATTCAAACCAAACGGACGC
TGACGGCTAAGGGCTATGCATCAGCAATGGGAGATGGCCGCGAGAGAAAG
GAGAAGGTCGAATCGCTGGAGAAGCTCTTCGCGACAGTGACCCCCGAAGT
CCCAAGGATTGAAGTTCAGAGTGAAGGTCTCGGGCGGGGCACACTTCCTC
GCAAGCACAGGCTGCAGATGAAGCAGCAGAACCTTGACCTCCAGTGAGAG
AAAAGGAAAAATGGGGAGAAGAATCTGCTAACCAGGAAGGTGGCGGAAAA
GCTCATGTTATTCCCTGGTCCTTATCATCACTGACCCTCAACCCTACCCT
TAACCCCCGGACTGCTGGCGGAACGTGCCGCAGGTGGAGAATGACTGAGG
GGGGAAGCGTAAGATCAGTGTGTTGCCGGGAGTGTGCTGGGACGGGGCTG
AGAGAGTGCAGGTTTTGCGCAGGCACAGGGCTATTGAAGGCGAGAAACGA
GGAAGACATCTAGAAAAACAAGGGAGAAGGAGAGAGTTGTTTTTGAACAT
CTCCTTGACAATCTCTTTGACAAACTCATGAGACCTTGGACCCCCTTCTC
CTGCATTGGATCACATCTTCAGCGGCCGCAGCTTGACATGCAGTAGCACG
TACTATGTATTCCCTATTACCGATTTGAAATAGGGTAATACAGTCAAACG
CACGCGCCCATTTATATGTACGTAGGGAACTAGTACTCGGAAACCGAGGC
CCCTTGAAGTATGTCCAGTAATCGATGTGCTTCTCAGTATGTATGTACAT
GTGGTGCTTAAAAGTCTGCAGCACCCAGTTCAGTATCTGATGTCGAAATG
TTCGGCGCTTCTTCCCCTGTTTGTGATTATCATACCTTCACGTCGCCCCA
CCCCCCCCCTCCCTGCTGCACCGGACTTGAGAAGGTTGGAGAGGACCTCA
TGACGATGACGGAACATGGGGGCCGAATCCCTGCCTGTCCCGTCTGCCAG
AGGGGTGGGGAGGAGAAATGTAAACGCTGCAATGGATCCGGGAGACTGGC
AGGCTGGCTCTTTAACCTTAAGAGGCAGGCCTGAGGATCAAGAGTGAAGC
CCTGGGT back to topCoding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1018:5586..7142- >mRNA_D-mesarthrocarpus_Contig1018.4.1 ID=mRNA_D-mesarthrocarpus_Contig1018.4.1|Name=mRNA_D-mesarthrocarpus_Contig1018.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=477bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1018:5586..7142- (Discosporangium mesarthrocarpum MT17_79)
ATGGGGAAGAAACCCTCCTCATCGAGTGAAGACGGCGAGGGCTATGCATC
AGCAATGGGAGATGGCCGCGAGAGAAAGGAGAAGGTCGAATCGCTGGAGA
AGCTCTTCGCGACAGTGACCCCCGAAGTCCCAAGGATTGAAGTTCAGAGT
GAAGGTCTCGGGCGGGGCACACTTCCTCGCAAGCACAGGCTGCAGATGAA
GCAGCAGAACCTTGACCTCCAGTGGAGAATGACTGAGGGGGGAAGCGTAA
GATCAGTGTGTTGCCGGGAGTGTGCTGGGACGGGGCTGAGAGAGTGCAGG
TTTTGCGCAGGCACAGGGCTATTGAAGGTTGGAGAGGACCTCATGACGAT
GACGGAACATGGGGGCCGAATCCCTGCCTGTCCCGTCTGCCAGAGGGGTG
GGGAGGAGAAATGTAAACGCTGCAATGGATCCGGGAGACTGGCAGGCTGG
CTCTTTAACCTTAAGAGGCAGGCCTGA back to top
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