mRNA_D-mesarthrocarpus_Contig10178.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Match: A0A2D7FJH7_9PROT (MFS transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FJH7_9PROT) HSP 1 Score: 459 bits (1180), Expect = 4.410e-160 Identity = 237/260 (91.15%), Postives = 248/260 (95.38%), Query Frame = 1 Query: 1 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSDRQPERSLKLTDLRATMGAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGMGWSLTDAGIAYSIAMGAGIAGRLFWGWIGSSYVPPVLLLALLGLAMGIACMAIGLVDETWQKPAVWAVAFVYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMITFPGSFGLILALTDSYQTAFVILGTIPIIVGAMLFVSARRQRS 780 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALA ALILQPFRAEFDSDRQP+RSLKLTDLRAT+GAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGM WSLTDAGIAYSIAM AGIAGRLFWGW+GS YVPPVLLL+LLG AMG+ACMAIGL+D +WQKPAVWA+A YGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMI FPG+FGLILALTDSYQTAF ILG IPI+VGAMLFVSA RQR+ Sbjct: 138 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALALALILQPFRAEFDSDRQPQRSLKLTDLRATLGAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGMSWSLTDAGIAYSIAMTAGIAGRLFWGWVGSLYVPPVLLLSLLGFAMGVACMAIGLIDISWQKPAVWAIAVAYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMIAFPGTFGLILALTDSYQTAFAILGAIPIVVGAMLFVSALRQRN 397
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Match: A0A2D8G599_9PROT (MFS transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G599_9PROT) HSP 1 Score: 385 bits (989), Expect = 4.650e-131 Identity = 197/258 (76.36%), Postives = 221/258 (85.66%), Query Frame = 1 Query: 1 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSDRQPERSLKLTDLRATMGAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGMGWSLTDAGIAYSIAMGAGIAGRLFWGWIGSSYVPPVLLLALLGLAMGIACMAIGLVDETWQKPAVWAVAFVYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMITFPGSFGLILALTDSYQTAFVILGTIPIIVGAMLFVSARRQ 774 TGVPVGGVIAGALLPV+V LFGWRGALVCAA MA+ AL+LQP RAEFDSDRQP+RSL LTD+RAT+ AVL DAR+RELA GLFAFTGLQLAFASFFVSFLSLGMGW+LTDAGIAYSIAMGAGI GRL WGW+G+ YVPP++LLALLG MG A MA+GLV + WQ A+W +AF YG TGIGYQGVLLAEIAR+SPPGMAGVVTGGAVFFAY GMI P +FGLILA+ DSY+ AFV LG +PI+V L SA ++ Sbjct: 138 TGVPVGGVIAGALLPVYVSLFGWRGALVCAALMAITLALLLQPLRAEFDSDRQPQRSLNLTDVRATLRAVLSDARIRELALGLFAFTGLQLAFASFFVSFLSLGMGWTLTDAGIAYSIAMGAGIXGRLIWGWVGTKYVPPLMLLALLGFVMGGAHMAVGLVSQDWQTWAIWGIAFAYGLTGIGYQGVLLAEIARVSPPGMAGVVTGGAVFFAYGGMILLPATFGLILAVQDSYRIAFVALGVVPIVVATKLLRSALKK 395
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Match: A0A2S6QEE4_9PROT (MFS domain-containing protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QEE4_9PROT) HSP 1 Score: 377 bits (969), Expect = 5.390e-128 Identity = 190/260 (73.08%), Postives = 220/260 (84.62%), Query Frame = 1 Query: 1 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSDRQPERSLKLTDLRATMGAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGMGWSLTDAGIAYSIAMGAGIAGRLFWGWIGSSYVPPVLLLALLGLAMGIACMAIGLVDETWQKPAVWAVAFVYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMITFPGSFGLILALTDSYQTAFVILGTIPIIVGAMLFVSARRQRS 780 TGVP+GGVIAG +LPV+V LFGWRGALVCAA MALA AL+LQP R EFDSDRQP RSLK+ D+RAT+ AV+ D RVRELA GLFAFTGLQLAFASFF+SFLSLG+GW+LT+AG AYSIAMGAG+ GRL WGW+G+ Y+ P++LLALLG +MG A MAI LV ETWQ AVW VAFVYG TGIGYQGVLLAEIAR+SPPGMAGVVTGGAVFFAY GMI P +FGLILA+ DSY+ AF+ILG +P+ V ML S+ + ++ Sbjct: 140 TGVPIGGVIAGMILPVYVSLFGWRGALVCAALMALALALLLQPLRTEFDSDRQPRRSLKMNDIRATLTAVISDRRVRELALGLFAFTGLQLAFASFFISFLSLGLGWTLTNAGFAYSIAMGAGVIGRLIWGWVGTKYLSPLMLLALLGFSMGFAHMAISLVTETWQTTAVWIVAFVYGLTGIGYQGVLLAEIARVSPPGMAGVVTGGAVFFAYAGMILMPAAFGLILAILDSYRIAFLILGIVPLFVAVMLMRSSLKYKT 399
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Match: A0A520NYW7_9PROT (MFS transporter n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NYW7_9PROT) HSP 1 Score: 377 bits (967), Expect = 1.080e-127 Identity = 192/258 (74.42%), Postives = 220/258 (85.27%), Query Frame = 1 Query: 1 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSDRQPERSLKLTDLRATMGAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGMGWSLTDAGIAYSIAMGAGIAGRLFWGWIGSSYVPPVLLLALLGLAMGIACMAIGLVDETWQKPAVWAVAFVYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMITFPGSFGLILALTDSYQTAFVILGTIPIIVGAMLFVSARRQ 774 TGVPVGG+IAGALLP +V L GWRGA++CAA MAL AL+LQP R EFDSDRQP+RSLKLTD+RAT+ AVLRD R+R+LA GLFAFTGLQLAFASFFVSFLSLG+GW LTDAGIAYSIAM AG+ GRL WGW+G+ +V P++LLA+LG AMG++ MAIGLV WQ AVW VAF+YG TGIGYQGVLLAEIAR+SPPGMAGV+TGGAVFFAYVGMI P +FGLILA+ DSY+ AF ILG IPI+V ML SA +Q Sbjct: 138 TGVPVGGIIAGALLPFYVSLLGWRGAILCAALMALILALLLQPLRKEFDSDRQPQRSLKLTDIRATLIAVLRDKRIRDLAMGLFAFTGLQLAFASFFVSFLSLGLGWKLTDAGIAYSIAMAAGVIGRLIWGWVGTKFVSPLMLLAMLGFAMGLSHMAIGLVTPGWQTVAVWGVAFLYGLTGIGYQGVLLAEIARVSPPGMAGVITGGAVFFAYVGMIMLPAAFGLILAVLDSYRLAFFILGGIPIVVSVMLMHSALQQ 395
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Match: A0A2E7QZE4_9PROT (MFS transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QZE4_9PROT) HSP 1 Score: 366 bits (939), Expect = 1.330e-123 Identity = 184/257 (71.60%), Postives = 216/257 (84.05%), Query Frame = 1 Query: 1 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSDRQPERSLKLTDLRATMGAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGMGWSLTDAGIAYSIAMGAGIAGRLFWGWIGSSYVPPVLLLALLGLAMGIACMAIGLVDETWQKPAVWAVAFVYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMITFPGSFGLILALTDSYQTAFVILGTIPIIVGAMLFVSARR 771 TGVPVGGV+AG LLPVFV FGWRGAL+CAA MALA A++LQP R+EFD+DRQ RSL+LTDLR T+ AVL+D + R LA GLFAFTG+QL FASFF+SFL+LG+GW+LT++G+AYSI+M +GI GRL WGW+G+ YV PV+LLALLG+AMGIACM +GLV WQK AVWAVAF YG TGIGYQGVLLAEIAR+SPPGMAGVVTGGA FFAY GMI P SFGLIL + +SY+ F+ILG+IPI VG + SARR Sbjct: 126 TGVPVGGVLAGILLPVFVTNFGWRGALICAAIMALALAVVLQPLRSEFDADRQSSRSLRLTDLRITLSAVLKDRKARLLALGLFAFTGVQLGFASFFISFLTLGLGWTLTESGVAYSISMISGIFGRLIWGWVGTRYVQPVILLALLGIAMGIACMGVGLVTPNWQKAAVWAVAFAYGLTGIGYQGVLLAEIARVSPPGMAGVVTGGAAFFAYAGMIAMPASFGLILEVFNSYRLGFIILGSIPIGVGLLFLWSARR 382
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Match: A0A2D8PP37_9PROT (MFS transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PP37_9PROT) HSP 1 Score: 345 bits (885), Expect = 2.770e-115 Identity = 176/260 (67.69%), Postives = 211/260 (81.15%), Query Frame = 1 Query: 1 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSDRQPERSLKLTDLRATMGAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGMGWSLTDAGIAYSIAMGAGIAGRLFWGWIGSSYVPPVLLLALLGLAMGIACMAIGLVDETWQKPAVWAVAFVYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMITFPGSFGLILALTDSYQTAFVILGTIPIIVGAMLFVSARRQRS 780 TGVP+GGV AG LLP++V FGWRGA+V AA MA+ AL+LQP RAEFDSDRQP R LKLTD+RATM VLRD RVREL+ LFAFTGLQLAFASF+VSFLSLG+GWSLT+AGIAYS+AM AGI GR+ WGW+GS+++PP+ LLA+LG M A MA LV W AVW +AF YG TGIGYQGVLLAEIAR+SPPGMAGV+TGGAVFFAY+GMI P +FG+IL + DSY+ AF++L +P+IV ++L SA R ++ Sbjct: 138 TGVPLGGVFAGVLLPIYVSEFGWRGAIVGAALMAVGLALLLQPLRAEFDSDRQPGRGLKLTDVRATMMTVLRDPRVRELSMALFAFTGLQLAFASFYVSFLSLGLGWSLTEAGIAYSVAMVAGIIGRILWGWVGSNFMPPLYLLAMLGFLMAFAGMAQALVGADWPVHAVWCIAFAYGLTGIGYQGVLLAEIARVSPPGMAGVITGGAVFFAYLGMILMPAAFGVILEIFDSYRLAFLVLAGVPMIVASILLRSAIRAKT 397
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Match: A0A2E3ZQM8_9PROT (MFS domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3ZQM8_9PROT) HSP 1 Score: 325 bits (833), Expect = 2.150e-107 Identity = 164/259 (63.32%), Postives = 200/259 (77.22%), Query Frame = 1 Query: 1 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSDRQPERSLKLTDLRATMGAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGMGWSLTDAGIAYSIAMGAGIAGRLFWGWIGSSYVPPVLLLALLGLAMGIACMAIGLVDETWQKPAVWAVAFVYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMITFPGSFGLILALTDSYQTAFVILGTIPIIVGAMLFVSARRQR 777 TGVPVGGVIAG +LP+FV F W+GAL+CAA MAL A+ LQP R EFDSDRQ +K D R+T+ AVL D +R LAFGLFAFTGLQL FASFFVSFLSLG+ WSL AG+ YSIAM AGI GR+ WGW+G+ +V P++LL+ LG++MG++CMA+G +++ WQ VW +AF+YG TGIGYQGVLLAEIAR+SP GMAGVVT GAV FAY GMI P +GLIL + +SYQ F I GT+PIIV A L + +RQ+ Sbjct: 138 TGVPVGGVIAGMVLPLFVTFFSWKGALLCAAMMALGLAVALQPLRNEFDSDRQSGHRIKAADFRSTLNAVLCDKNIRHLAFGLFAFTGLQLVFASFFVSFLSLGLEWSLARAGVTYSIAMVAGIFGRIVWGWVGTKHVQPLILLSFLGVSMGVSCMALGFINQEWQSFPVWGLAFLYGLTGIGYQGVLLAEIARVSPAGMAGVVTAGAVCFAYAGMIIMPAVYGLILEIFNSYQLGFFIFGTLPIIVAAELLRTEKRQK 396
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Match: UPI001AEBC280 (MFS transporter n=4 Tax=Aromatoleum TaxID=551759 RepID=UPI001AEBC280) HSP 1 Score: 196 bits (497), Expect = 8.360e-57 Identity = 101/261 (38.70%), Postives = 158/261 (60.54%), Query Frame = 1 Query: 1 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSDRQPERSLKLTDLRATMGAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGMGWSLTDAGIAYSIAMGAGIAGRLFWGWIGSSYVPPVLLLALLGLAMGIACMAIGLVDETWQKPAVWAVAFVYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMITFPGSFGLILALTDSYQTAFVILGTIPIIVGAMLFVSARRQRSQ 783 TGVP+GG +AGAL+P F L+GW+GA + A+ + A++ QP RA FD+DR P R L L + + V R+R+LA F F +QL ++ V++L+ G L AG+ ++ GAG+ GRL WG + ++ P LL+LL LAM A + D W AV AV+ ++GAT IG+ GV LAE+AR++P G AGV+TGG +FF Y G++ P +F ++ T S+ + +G + +++G +L ++ R+ ++ Sbjct: 136 TGVPLGGALAGALVPGFAMLWGWQGAALAVAAACVLMAVLAQPTRAGFDADRDPARRLSLAGVFKPLALVFAYPRIRDLAICTFFFGAMQLCLTTYLVTYLTSVYGMPLVTAGLVLALTQGAGVGGRLMWGLVADRWITPRRLLSLLALAMAAASLLTAAFDPDWPFVAVMAVSMLFGATAIGWNGVYLAEVARLAPAGQAGVLTGGTLFFTYFGVVAGPPAFAALVGATGSFAVGYAAIGCVILVIGLLLVLTHARRPAE 396
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Match: A0A3N1KPF0_9PROT (Fucose permease n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1KPF0_9PROT) HSP 1 Score: 196 bits (497), Expect = 9.010e-57 Identity = 109/259 (42.08%), Postives = 149/259 (57.53%), Query Frame = 1 Query: 1 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSDRQPERSLKLTDLRATMGAVLRDARVRELAFGLFAFTGLQLAFASFFVSFLSLGMGWSLTDAGIAYSIAMGAGIAGRLFWGWIGSSYVPPVLLLALLGLAMGIACMAIGLVDETWQKPAVWAVAFVYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMITFPGSFGLILALTDSYQTAFVILGTIPIIVGAMLFVSARRQR 777 TGVPVG + AG +P+ V +GW+ A + + F L +QP R EFDSDRQP L + AT+ V D +R A+ +F F GLQ F SFFVS+LS GMG+SLT AG +++A I R+ WGWIGS ++ P L+L LGLAM +A +A+ + + A+ Y AT +G+ G+LLAE+AR +PPG G +TGG V F GM+T+P +L LT +Y F + IVG L R+ R Sbjct: 146 TGVPVGAMTAGVAVPLLVVTYGWQSAFIVFGCICWVFGLAIQPLRREFDSDRQPRHQLSFAAIGATIRTVWGDEGLRGYAYAMFCFVGLQAIFGSFFVSYLSDGMGYSLTAAGGIFALAQAIAIVARIAWGWIGSRWIDPRLVLGGLGLAMAVASLAVAAIGFGASYWTILAIGVAYSATAVGWHGLLLAEVARRAPPGRIGAITGGVVAFGGAGMMTYPLLHAGLLQLTGAYGWGFALAAFPAAIVGLRLIRGGRQTR 404
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Match: A0A351SDJ2_9GAMM (MFS domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351SDJ2_9GAMM) HSP 1 Score: 195 bits (495), Expect = 1.400e-56 Identity = 107/255 (41.96%), Postives = 152/255 (59.61%), Query Frame = 1 Query: 1 TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSDRQPERSLKLTDLRATMGAVLRDARV----RELAFGLFAFTGLQLAFASFFVSFLSLGMGWSLTDAGIAYSIAMGAGIAGRLFWGWIGSSYVPPVLLLALLGLAMGIACMAIGLVDETWQKPAVWAVAFVYGATGIGYQGVLLAEIARISPPGMAGVVTGGAVFFAYVGMITFPGSFGLILALTDSYQTAFVILGTIPIIVGAML 753 TGVP+GG+ AG ++P FV FGW GA + + + ALILQP RAEFD DR+P + D+ T + +R V R LAF F+F GLQLAF ++FV+++ +G SL AG ++++ I R+FWG +GS ++ LLA LG+ MG A + +GL D W A+ +A + T IG+ G+LLAEIAR++P G G TGG + FA G + FP ++ L+L+LT S+ F I G I G +L Sbjct: 136 TGVPLGGMAAGFIVPFFVSRFGWEGAFIGCGIICVFMALILQPLRAEFDRDREPGTKISPKDILRTFRSTIRMVSVHPELRNLAFAGFSFAGLQLAFTTYFVTYMVQDLGHSLETAGWVFAVSQAFAIGARIFWGVVGSRWMASRWLLACLGVTMGAASVVVGLFDNQWSTSAILLIAILISVTAIGWNGILLAEIARLAPSGDVGGTTGGVIGFASFGSMAFPATYSLLLSLTGSFSLGFYIAGIPACIAGLVL 390 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10178.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10178.1.1 >prot_D-mesarthrocarpus_Contig10178.1.1 ID=prot_D-mesarthrocarpus_Contig10178.1.1|Name=mRNA_D-mesarthrocarpus_Contig10178.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=264bp TGVPVGGVIAGALLPVFVDLFGWRGALVCAASMALAFALILQPFRAEFDSback to top mRNA from alignment at D-mesarthrocarpus_Contig10178:2..793+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10178.1.1 ID=mRNA_D-mesarthrocarpus_Contig10178.1.1|Name=mRNA_D-mesarthrocarpus_Contig10178.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=792bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10178:2..793+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10178:2..793+ >mRNA_D-mesarthrocarpus_Contig10178.1.1 ID=mRNA_D-mesarthrocarpus_Contig10178.1.1|Name=mRNA_D-mesarthrocarpus_Contig10178.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=792bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10178:2..793+ (Discosporangium mesarthrocarpum MT17_79)back to top |