mRNA_D-mesarthrocarpus_Contig10177.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Match: A0A1Z5KPP7_FISSO (HECT-type E3 ubiquitin transferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KPP7_FISSO) HSP 1 Score: 99.8 bits (247), Expect = 1.050e-20 Identity = 69/173 (39.88%), Postives = 103/173 (59.54%), Query Frame = 1 Query: 94 ETSAELFLRVTSGAAQGRPVPRGRLFSLLSRARAAVAWAGGSEARVAAVRRRLMALMAMVYCHPSTEAITAFFGAQPELVQELVEVAKSKVDPG-----------LRGVVPLDVCILAVHCLAALMHAWNGRTDIGLV--TRHTNVFQELGITRGQYGGVLPSLVRQSVAELH 573
+++AELF VP+ R F+LLS R A ++ ++R+ AV RRL AL+ M++ HPS +AIT +F AQPEL E+V++ + V L+ V+P +V +LAV LAAL+ +G T+ L TR ++V ELG+ +GQY GVLP+L+R S++ LH
Sbjct: 266 KSTAELFFSCPQ-------VPKERQFALLSDIRLAKSF-HCRDSRIKAVERRLRALIIMLHSHPSQDAITNYFSAQPELCAEVVDLIRPTVSGAHVAPHPTVENLLQNVIPYEVRLLAVEALAALVLRRDGLTNGALTGTTRLSSVLIELGVGKGQYLGVLPTLIRYSLSCLH 430
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Match: A0A1Z5JHS1_FISSO (HECT-type E3 ubiquitin transferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHS1_FISSO) HSP 1 Score: 96.3 bits (238), Expect = 1.670e-19 Identity = 69/181 (38.12%), Postives = 102/181 (56.35%), Query Frame = 1 Query: 88 RRETSAELFLRVTSGAAQGRPVPRGRLFSLLSRARAAVAWAGGSEARVAAVRRRLMALMAMVYCHPSTEAITAFFGAQPELVQELVEVAKSKVDPG-----------LRGVVPLDVCILAVHCLAALMHAWNGRTDIGLV--TRHTNVFQELGITRGQYGGVLPSLVRQSVAELHALSARL 591
R+ TS + + Q VP+ R F+LLS R A ++ ++R+ AV RRL AL+ M++ HPS +AIT +F AQPEL E+V++ + V L+ V+P V +LAV L AL+ +G T+ L TR ++V ELG+ +GQY GVLP+L+R S++ LH L
Sbjct: 260 RKVTSVKSTAELLFSCPQ---VPKERQFALLSDIRLAKSF-HCRDSRIKAVERRLRALIIMLHSHPSQDAITNYFSAQPELCAEVVDLIRPTVSGAHVAAHPTVENLLQNVIPYKVRLLAVEALTALVLRRDGLTNGALTGTTRLSSVLIELGVGKGQYLGVLPTLIRYSLSCLHTTDVPL 436
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Match: A0A7S4VU13_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VU13_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.910e-16 Identity = 68/204 (33.33%), Postives = 103/204 (50.49%), Query Frame = 1 Query: 94 ETSAELFLRVTSGAAQGRPVPRGRLFSLLSRARAAVAWAGGSEARVAAVRRRLMALMAMVYCHPSTEAITAFFGAQPELVQELVEVAKSKVDP-----------------GLRG-----------------VVPLDVCILAVHCLAALMHAWNGRTDIGL--VTRHTNVFQELGITRGQYGGVLPSLVRQSVAELHALSARLHG 597
+++AELF A VP + F+LL++ R A ++ +++RVAAV RRL AL+ +++ HPS + I+ +F AQPEL ELV++ + V G G VVP LA+ L AL+ +G GL V R NV ELG+ +GQY G+LP+L+R S+A L++ ++ G
Sbjct: 161 KSTAELFFNCIEKAGGWARVPWDKAFTLLAQLRLAKSF-HSNKSRVAAVERRLRALICVLHAHPSQDVISGYFQAQPELCAELVDLVRPTVSSASVSSAASLLSRKDFAIGDNGQDNDGRHAVIAAVADSSVVPYSARTLAIESLTALVARKDGANG-GLTNVARQANVLGELGVGKGQYLGLLPTLIRYSLASLNSFLSQGKG 362
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Match: A0A7S2VVZ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVZ5_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 6.090e-16 Identity = 60/162 (37.04%), Postives = 91/162 (56.17%), Query Frame = 1 Query: 97 TSAELFLRVTSGAAQGRPVPRGRLFSLLSRARAAVAWAGGSEARVAAVRRRLMALMAMVYCHPSTEAITAFFGAQPELVQELVEVAKSKVDPGLRG-VVPLDVCI--LAVHCLAALMHAWN-GRTDIGLVTRHTNVFQELGITRGQYGGVLPSLVRQSVAEL 570
T+A++F A VP + FSLL+R R + ++ +R AAVR RL +L++ +Y HPS + + +F AQP+L +E+V++ +S + P CI LA+ L AL+ + G I + RH NV ELG+ +GQY G+LPSL+R V L
Sbjct: 179 TTADVFRMC----ADKYKVPHDKRFSLLARIRLSKSF-NTQSSRQAAVRTRLYSLLSALYVHPSMDVLAGYFQAQPDLCREIVDLIRSPPPSEVSSQTTPTPQCIRLLALDVLVALVSPRSEGGQGIPSLARHVNVMGELGVGKGQYMGLLPSLLRDCVTNL 335
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Match: A0A448ZD07_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZD07_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.170e-15 Identity = 60/188 (31.91%), Postives = 94/188 (50.00%), Query Frame = 1 Query: 97 TSAELFLRVTSGAAQGRPVPRGRLFSLLSRARAAVAWAGGSEARVAAVRRRLMALMAMVYCHPSTEAITAFFGAQPELVQELVEVAKSKVDPGLRG--------------------------VVPLDVCILAVHCLAALM-HAWNGRTDIGLVTRHTNVFQELGITRGQYGGVLPSLVRQSVAELHAL 579
++A+LF + A +P RLF LL+ R ++ +RVAA+ RRL AL+ +++ +PS E ++ +F AQPEL ELV++ + V G +VP + LA+ L AL G + RH+N+ ELG+ +GQY G+LP+L+R S+A L +L
Sbjct: 336 STADLFFQCLRQAGGVERIPADRLFPLLADIRLTRSF-HCQASRVAAIERRLRALITILHANPSQEVMSGYFQAQPELCVELVDLLRPTVSSGAVSASSAAPKSSKIPRQNRDHIVTLSNSPIVPYQIRELALQSLTALAARREGGNGSLTGFARHSNILTELGVGKGQYLGLLPTLIRYSLASLGSL 522
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Match: B7G082_PHATC (HECT-type E3 ubiquitin transferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G082_PHATC) HSP 1 Score: 81.3 bits (199), Expect = 2.600e-14 Identity = 67/189 (35.45%), Postives = 95/189 (50.26%), Query Frame = 1 Query: 88 RRET--SAELFLRVTSGAAQGRPVPRGRLFSLLSRARAAVAWAGGSEARVAAVRRRLMALMAMVYCHPSTEAITAFFGAQPELVQELVEVAKSKVD----------------PGLRGV---------VPLDVCILAVHCLAALMHAWNGRTD-IGLVTRHTNVFQELGITRGQYGGVLPSLVRQSVAEL 570
R+ET +AEL+ V A +P RLF LL+ R A ++ AR+ AV RRL AL +++ HPS E + +F AQPEL E+V++ + V P R VP + +LAV LAAL+ +G T + R + V ELGI +G Y G+LP+L+R S+A L
Sbjct: 305 RKETKSTAELYYLVLERAGGMDKIPSDRLFPLLADIRLARSF-HSQAARIGAVERRLRALTTILHAHPSQEVMNGYFQAQPELCVEIVDLLRPTVSSANIAAASGRATETNSPLQRDAITCLSSCQPVPYTIRMLAVESLAALVARRDGSTGALSGSARLSTVLAELGIGKGYYLGLLPTLLRYSLASL 492
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Match: A0A7S2L793_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L793_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.550e-13 Identity = 58/165 (35.15%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 169 FSLLSRARAAVAWAGGSEARVAAVRRRLMALMAMVYCHPSTEAITAFFGAQPELVQELVEVAKSKV---------DPGLRGV-------------------VPLDVCILAVHCLAALMHAWNGRT-DIGLVTRHTNVFQELGITRGQYGGVLPSLVRQSVAELHA 576
F+LLS R + A+ S RV+A++ RL AL+ ++Y S E+ITA+F AQPEL ELV++ + V D G+ VP DV LA+ L AL+ + + R NV ELG+ +GQY G+LP+L+R S+A L++
Sbjct: 135 FTLLSTIRLSKAFYQNSNTRVSAIKLRLRALVTILYTLSSVESITAYFMAQPELCGELVDLVRPTVSSSGAATSSDGGVSXXXXXESESSNPILALADSPQVPYDVRALAIEALTALVARRDSPAGSFNIAARQANVLSELGVGKGQYLGLLPTLIRFSLAALNS 299
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Match: A0A7S3A7X9_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A7X9_9RHOD) HSP 1 Score: 62.0 bits (149), Expect = 1.030e-7 Identity = 49/141 (34.75%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 151 VPRGRLFSLLSRARAAVAWAGGSEARVAAVRRRLMALMAMVYCHPSTEAITAFFGAQPELVQELVEVAKSKVDPGLRGVVPLDVCILAVHCLAALMHAWNGRTDIGLVTRHTNVFQELGITR-GQYGGVLPSLVRQSVAEL 570
+PR F+L +R R A A+ GG E R RL+AL + S E +T F PELV ELV +A++ GL G +PL + I A+ CL ++ + +G+ + Q L IT + G+LPS++R +A L
Sbjct: 270 LPRRLRFTLSTRYRRARAFVGGMETRTRHTNVRLLALATLAQMQLSPEPLTFVFHRDPELVSELVSLARADAADGL-GDLPLSIRISALKCLTSISN--HGQ----------RLKQVLSITDVSSHNGILPSMLRSEIALL 397
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Match: A0A7R9ZA64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZA64_9STRA) HSP 1 Score: 57.8 bits (138), Expect = 7.860e-7 Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 1 Query: 76 GPDGRRETSAELFLRVTSGAAQGRPVPRGRLFSLLSRARAAVAWAGGSEARVAAVRRRLMALMAMVYCHPSTEAITAFFGAQPELVQELVEVAKSKV 366
G D ++AELF A VP RLF LLS R A ++ + R+AAV RR+ AL+A + +PS + + +F AQPELV E+ ++ + V
Sbjct: 98 GADLEVRSTAELFFLALDRAGGRESVPPSRLFPLLSEVRLARSFHRRDD-RIAAVERRMRALVATLQSNPSQDVVGGYFAAQPELVSEVCDLVRPTV 193
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Match: A0A7S1VIP8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VIP8_9STRA) HSP 1 Score: 55.8 bits (133), Expect = 9.190e-6 Identity = 38/92 (41.30%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 88 RRET--SAELFLRVTSGAAQGRPVPRGRLFSLLSRARAAVAWAGGSEARVAAVRRRLMALMAMVYCHPSTEAITAFFGAQPELVQELVEVAK 357
RRE +AE+F R A G P ++F+LL R A ++ + RV A +RRL+AL A++ HPST+ I+ +F AQPEL ELV++ +
Sbjct: 291 RREAKPTAEIFFRCLEKA--GGKFPSDQMFALLVDVRLARSFYSQAS-RVEAAKRRLLALSAILNSHPSTDTISGYFQAQPELCVELVDLLR 379 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10177.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10177.1.1 >prot_D-mesarthrocarpus_Contig10177.1.1 ID=prot_D-mesarthrocarpus_Contig10177.1.1|Name=mRNA_D-mesarthrocarpus_Contig10177.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=202bp EGENRAPSPGSHGVTDSIHLCPRPPGPDGRRETSAELFLRVTSGAAQGRPback to top mRNA from alignment at D-mesarthrocarpus_Contig10177:148..4045- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10177.1.1 ID=mRNA_D-mesarthrocarpus_Contig10177.1.1|Name=mRNA_D-mesarthrocarpus_Contig10177.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3898bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10177:148..4045- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10177:148..4045- >mRNA_D-mesarthrocarpus_Contig10177.1.1 ID=mRNA_D-mesarthrocarpus_Contig10177.1.1|Name=mRNA_D-mesarthrocarpus_Contig10177.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=606bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10177:148..4045- (Discosporangium mesarthrocarpum MT17_79)back to top |