mRNA_D-mesarthrocarpus_Contig10176.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Match: D7FJT5_ECTSI (Splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT5_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 6.000e-18 Identity = 37/49 (75.51%), Postives = 46/49 (93.88%), Query Frame = 1 Query: 1 ELFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKL 147 ELFAY INWQ+VE +II+SKMRPW+VKK+++YLGEEEKTLTEF++TKL Sbjct: 709 ELFAYEINWQMVEQHNIIQSKMRPWIVKKIIEYLGEEEKTLTEFVLTKL 757
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Match: A0A7S2CNP4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CNP4_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.800e-14 Identity = 29/48 (60.42%), Postives = 42/48 (87.50%), Query Frame = 1 Query: 4 LFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKL 147 LF++PI+W V+++ I+ + MRPW+VKK+V+YLGEEEKTL +FI+TKL Sbjct: 53 LFSFPIHWDVLDAHRIVATNMRPWIVKKIVEYLGEEEKTLIDFIITKL 100
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Match: A0A7S3UVP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVP2_HETAK) HSP 1 Score: 68.9 bits (167), Expect = 4.080e-13 Identity = 29/48 (60.42%), Postives = 41/48 (85.42%), Query Frame = 1 Query: 4 LFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKL 147 LFAYP+ W VV+ DII+SK++ W+VKK+V++LGEEE+TL +FI +KL Sbjct: 105 LFAYPVAWAVVDEHDIIKSKLKAWIVKKIVEFLGEEEETLIDFICSKL 152
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Match: A0A7S2XWQ2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWQ2_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 1.600e-12 Identity = 28/48 (58.33%), Postives = 39/48 (81.25%), Query Frame = 1 Query: 4 LFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKL 147 LFAY +NW +V D++ SK+RPWV KK+ +YLGEEE+TL +FIV++L Sbjct: 153 LFAYKVNWDLVHKHDVVGSKLRPWVSKKITEYLGEEERTLIDFIVSQL 200
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Match: K3WIU2_GLOUD (PWI domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIU2_GLOUD) HSP 1 Score: 68.2 bits (165), Expect = 4.020e-12 Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1 Query: 1 ELFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKL 147 ELF+YPI+W V+ I+ +KM PWV KK+++YLGEEE TL EFI+ KL Sbjct: 464 ELFSYPIDWMAVDKHKIVAAKMAPWVAKKIIEYLGEEEPTLIEFILKKL 512
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Match: A0A2P6N0A1_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N0A1_9EUKA) HSP 1 Score: 67.8 bits (164), Expect = 5.500e-12 Identity = 27/49 (55.10%), Postives = 40/49 (81.63%), Query Frame = 1 Query: 1 ELFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKL 147 ++FAYPI+W+ +E +II +K+RPWV KK V+YLG+EEKTL +IV ++ Sbjct: 521 QVFAYPIDWETIEKENIIENKLRPWVTKKFVEYLGQEEKTLIAYIVNQI 569
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Match: A0A4U5LNI4_STECR (PWI domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5LNI4_STECR) HSP 1 Score: 63.5 bits (153), Expect = 1.180e-11 Identity = 25/49 (51.02%), Postives = 40/49 (81.63%), Query Frame = 1 Query: 1 ELFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKL 147 +LFAYPI W+ V+ D+++S++RPWV KK+V+Y+GEEE +L +F+ K+ Sbjct: 26 DLFAYPIEWEFVDE-DLVKSRVRPWVTKKIVEYIGEEEASLVDFVCDKV 73
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Match: A0A835Z4I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I4_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.920e-11 Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 1 Query: 4 LFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKL 147 LFAYP++W VV S I+ +KMRPWVV+K+ +YLGEEE TL +F+ KL Sbjct: 673 LFAYPLDWGVVTSHGIVANKMRPWVVRKIREYLGEEEPTLIDFVCAKL 720
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Match: L8H642_ACACA (PWI domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H642_ACACA) HSP 1 Score: 63.9 bits (154), Expect = 1.250e-10 Identity = 23/49 (46.94%), Postives = 39/49 (79.59%), Query Frame = 1 Query: 1 ELFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKL 147 +LF + ++W +V+ +I++ +M+PWV KK+V+YLGEEE TL EF++ K+ Sbjct: 594 DLFNFQLSWDIVDEAEIVQKRMKPWVTKKIVEYLGEEEATLIEFVLAKM 642
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Match: A0A7S2W6J1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W6J1_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 1.710e-10 Identity = 24/49 (48.98%), Postives = 39/49 (79.59%), Query Frame = 1 Query: 1 ELFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKL 147 ELFA PI+W V++ D++++ +RPW+ K+V+YLG+EEK+L +FI K+ Sbjct: 604 ELFALPIDWAAVDANDLVKTSLRPWIASKIVEYLGQEEKSLIDFIADKV 652 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10176.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10176.1.1 >prot_D-mesarthrocarpus_Contig10176.1.1 ID=prot_D-mesarthrocarpus_Contig10176.1.1|Name=mRNA_D-mesarthrocarpus_Contig10176.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=49bp ELFAYPINWQVVESCDIIRSKMRPWVVKKMVDYLGEEEKTLTEFIVTKLback to top mRNA from alignment at D-mesarthrocarpus_Contig10176:888..1034- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10176.1.1 ID=mRNA_D-mesarthrocarpus_Contig10176.1.1|Name=mRNA_D-mesarthrocarpus_Contig10176.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=147bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10176:888..1034- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10176:888..1034- >mRNA_D-mesarthrocarpus_Contig10176.1.1 ID=mRNA_D-mesarthrocarpus_Contig10176.1.1|Name=mRNA_D-mesarthrocarpus_Contig10176.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=147bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10176:888..1034- (Discosporangium mesarthrocarpum MT17_79)back to top |