mRNA_D-mesarthrocarpus_Contig10175.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A6H5JUA1_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUA1_9PHAE) HSP 1 Score: 255 bits (651), Expect = 3.860e-77 Identity = 140/277 (50.54%), Postives = 185/277 (66.79%), Query Frame = 1 Query: 1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFIT-MYWGMGIISASLLGLVLSSVIG--EEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKKPSVMEL--IGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVD---VGDVRELFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGR--EGNSNDMYLQTGASGAAFMPG 801 GML GA F SIYAD++GRR AF+ SL +F G + SAL+P+ Y L R LVGFG+GGNLPV ++L EFLPT+ RAK L + ++WG+G+ISASLLGL+L++V+G +E+ MWRWFLG A LPSA++ AY ++PESPRFL V GRH +AMQ+LE VA +N K V+ L GQ G GE + + G + D G+VRELF TPI+RR TL LW+VW +N SY+G+ FLLP YY G ++ +Y+ + GA F+PG Sbjct: 56 GMLVGAGFWSIYADKRGRRTAFVSSLACVFVGGVFSALSPSLYILCLCRVLVGFGVGGNLPVTTALVTEFLPTDERAKILCRVAGIFWGVGMISASLLGLILANVLGPGQEETMWRWFLGAAALPSAMVAVAYRLLPESPRFLQVMGRHDEAMQVLERVARINGKLDVLGLDFSGQATGLRSDGGGRDGEAAAAGIGQSATYGRKADNIEAGEVRELFHTPILRRITLSLWVVWLTLNISYYGVTFLLPRYYDEISGGEADFVYILSALVGATFIPG 332
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A6H5JDE1_9PHAE (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JDE1_9PHAE) HSP 1 Score: 249 bits (635), Expect = 4.980e-75 Identity = 149/330 (45.15%), Postives = 205/330 (62.12%), Query Frame = 1 Query: 1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFIT-MYWGMGIISASLLGLVLSSVIG--EEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKKPSVMEL--IGQKV-------VNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVRELFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGR--EGNSNDMYLQTGASGAAFMPGMSCKVNAGVDAVSRLSILSDVRIARQNMPQRVKAWGMYSIYAXXXYLVT 948 GML GA SIYAD++GRR AF+ SL +F G + SAL+P+++ L R +VGFG+GGNLPV ++L EFLPT+ RA L ++WG+G+I ASL GL+L++V+G +E+ MWRWFLG+A LPSA++ AY ++PESPRFL V GRH +AMQ+LE+VA +N + V+ L GQ V + G G G A +QE+ E + GDVRELF TPI+RR TL LW+VWF +N SYFG+ FLLP YY + G +N +Y+ + GA F+PG A + + + S+ R+ R + W Y+ A L T Sbjct: 34 GMLVGAGSWSIYADKRGRRTAFVSSLACVFVGGVLSALSPSFFVLCLCRAVVGFGVGGNLPVTTALITEFLPTDDRANILCATAGIFWGIGMIFASLFGLMLANVLGPGKEEAMWRWFLGVAALPSAIVAVAYRLLPESPRFLQVMGRHDEAMQVLEHVARMNGRLDVLGLGFSGQAVGEGDPLYLRTAGLSVAAGIGDA-AAHVQEA--ENAEAGDVRELFHTPILRRITLSLWVVWFTVNISYFGVTFLLPRYYDKISGGQANFVYILSALVGATFIPG----------AFAAMWLCSERRLGRVGALK----WSSYATAAAVILLAT 346
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A6H5JL66_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL66_9PHAE) HSP 1 Score: 239 bits (611), Expect = 1.400e-70 Identity = 148/339 (43.66%), Postives = 202/339 (59.59%), Query Frame = 1 Query: 1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFIT-MYWGMGIISASLLGLVLSSVIG--EEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKKPSVMEL--IGQKVVNHFGNGCTGGEGVVRALTLQ-----ESGG-----------EQVDVGDVRELFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGR--EGNSNDMYLQTGASGAAFMPGMSCKVNAGVDAVSRLSILSDVRIARQNMPQRVKAWGMYSIYAXXXYLVT 948 GML GA F SIYAD++GRR AF+ SL F G + SA + +++ L R LVGFG+GGNLPVA++L EF+PTN R+ L +WG+G+ISASLLGL+L++V+G +E+ MWRWFLG+A LPSA++ AY ++PESPRFL V GRH +A+Q+LE+VA +N K V+ L GQ V GEG L + +SGG E + GDVRELF TPI+RR TL LW+VWF +N S FG+ FLLP YY + G ++ +Y+ + G +PG A + + + S+ R+ R + W Y+ A L T Sbjct: 118 GMLVGAGFWSIYADKRGRRTAFVSSLACAFVGGVFSAFSSSFHLLCLCRVLVGFGVGGNLPVATALVTEFVPTNDRSNVLCTTAGTFWGIGMISASLLGLILANVLGAGKEEAMWRWFLGVAALPSAIVAVAYQLLPESPRFLQVMGRHDEAIQVLEHVARMNGKLDVLGLDFSGQSV----------GEGDNLRLRIAGSSDLDSGGIGDASAHGQEAENAEAGDVRELFHTPILRRITLSLWVVWFTVNISNFGVTFLLPRYYDKISGGQADFVYILSACVGVTCIPG----------AFAAMWLCSEHRLGRVGALK----WSSYATAAAVILLAT 432
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: D7FV27_ECTSI (Major facilitator transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV27_ECTSI) HSP 1 Score: 231 bits (589), Expect = 3.080e-68 Identity = 144/330 (43.64%), Postives = 198/330 (60.00%), Query Frame = 1 Query: 1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFIT-MYWGMGIISASLLGLVLSSVIG--EEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKKPSVMEL--IGQKV-------VNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVRELFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGR--EGNSNDMYLQTGASGAAFMPGMSCKVNAGVDAVSRLSILSDVRIARQNMPQRVKAWGMYSIYAXXXYLVT 948 GML GA F SIYAD++GRR AF+ SL +F G + SAL+P+++ L R LVGFG+GGNLPV ++L EFLPTN R+ L +WG+G+ISASLLGL+L++V+G +E+ MWRWFLG+A LPSA++ AY ++PESPRFL V GRH +A+Q+LE+VA +N K V+ L GQ V + G+ G+ A T + E + GDVRELF TPI+RR TL L YFG+ FLLP YY + G ++ +Y+ + GA F+PG A + + + S+ R+ R + W Y+ A L T Sbjct: 34 GMLVGAGFWSIYADKRGRRTAFVSSLACVFVGGVFSALSPSFHVLCLCRVLVGFGVGGNLPVTTALVTEFLPTNDRSNVLCVTAGTFWGVGMISASLLGLILANVLGPGKEEAMWRWFLGVAALPSAIVAVAYRLLPESPRFLQVMGRHDEAIQVLEHVARMNGKLDVLGLDFSGQAVGEGDNLRLRMAGSSDLDSGGIGDASTHGQEA-ENAEAGDVRELFHTPILRRITLSL----------YFGVTFLLPRYYDKISGGQADFVYILSAFVGATFIPG----------AFAAMWLCSEHRLGRVGALK----WSSYATAAAVILLAT 338
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A251PU65_PRUPE (MFS domain-containing protein n=1 Tax=Prunus persica TaxID=3760 RepID=A0A251PU65_PRUPE) HSP 1 Score: 139 bits (351), Expect = 3.380e-34 Identity = 89/246 (36.18%), Postives = 138/246 (56.10%), Query Frame = 1 Query: 1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVN--KKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVR-----ELFRTPIMRRATLCLWMVWFFINFSYFGLVFL 717 GML GA I +D+ GRR F+++ I SAL+PNY +L+ LRCLVG GLGG PV SS EF+P +R + + +W +G I + L + +G WRW LGL+ LPS++L+ Y++ PESPR+L ++GR +A+ ILE VA +N K PS + K+ + + ++ +++ +++D D+ + +P + R+TL LW+V+F FSY+GLV L Sbjct: 72 GMLVGAYSWGIVSDKHGRRKGFLITATITSGAGFLSALSPNYTSLILLRCLVGVGLGGG-PVLSSWFLEFIPAPNRGTWMVVFSAFWTLGTILEASLAWFVMPTLG-----WRWLLGLSSLPSSLLLVFYWLAPESPRYLCLKGRTTEAINILERVARLNGTKLPSGNLVSDLKIELSEKSTLSEDARLISPTENEDTSSKEMDSSDMGGISSLSMLLSPKLVRSTLLLWVVFFGNAFSYYGLVLL 311
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A7J7CYM6_TRIWF (Organic cation/carnitine transporter 7-like n=3 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CYM6_TRIWF) HSP 1 Score: 140 bits (354), Expect = 6.370e-34 Identity = 95/244 (38.93%), Postives = 137/244 (56.15%), Query Frame = 1 Query: 1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMG-IISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVN--KKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVRELFR--TPIMRRATLCLWMVWFFINFSYFGLVFL 717 GML GA + +D+ GRR F+++ V+ SA +PNY +L+ALRCLVG GLGG PV S EF+P SR + + +W +G I+ ASL LV+ + WRW L L+ +PS++L+ Y V PESPRFL + GR K A +LE +A +N K P + L+ ++ + G + EG + S G + + G + L +P + R+TL LWMV+F FSY+GLV L Sbjct: 72 GMLVGAYSWGLVSDKYGRRKGFLITAVVTSVAGFLSAFSPNYLSLIALRCLVGVGLGGG-PVLVSWFLEFIPAPSRGTWMVIFSAFWTVGTILEASLAWLVMPRL------GWRWLLALSAVPSSLLLLFYGVTPESPRFLCLNGRRKDAQNVLEKIARLNGTKLPPGI-LVSERELEEHGKNISS-EGSKLLGEDKSSEGLESNFGGISSLLILFSPRLVRSTLLLWMVFFGNAFSYYGLVLL 306
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A314UUE2_PRUYE (Organic cation/carnitine transporter 7 n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314UUE2_PRUYE) HSP 1 Score: 143 bits (361), Expect = 6.620e-34 Identity = 91/246 (36.99%), Postives = 139/246 (56.50%), Query Frame = 1 Query: 1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVN--KKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVR-----ELFRTPIMRRATLCLWMVWFFINFSYFGLVFL 717 GML GA I +D+ GRR F+++ I F SAL+PNY +L+ LRCLVG GLGG PV SS EF+P +R + + +W +G I + L + +G WRW LGL+ LPS++L+ Y+V PESPR+L ++GR +A+ ILE VA +N K PS + K+ + + ++ +++ +++D D+ + +P + R+TL LW+V+F FSY+GLV L Sbjct: 72 GMLVGAYTWGIVSDKHGRRKGFLITATITFGAGFLSALSPNYSSLILLRCLVGVGLGGG-PVLSSWFLEFIPAPNRGTWMVVFSAFWTLGTILEASLAWFVMPTLG-----WRWLLGLSSLPSSLLLVFYWVAPESPRYLCLKGRTTEAINILERVARLNGTKLPSGNLVSDLKIELSEKSTLSEDARLISPTENEDTSPQEMDSSDMGGISSLSMLLSPKLVRSTLLLWVVFFGNAFSYYGLVLL 311
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: M5WTD2_PRUPE (MFS domain-containing protein n=6 Tax=Prunus TaxID=3754 RepID=M5WTD2_PRUPE) HSP 1 Score: 139 bits (351), Expect = 1.720e-33 Identity = 89/246 (36.18%), Postives = 138/246 (56.10%), Query Frame = 1 Query: 1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVN--KKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVR-----ELFRTPIMRRATLCLWMVWFFINFSYFGLVFL 717 GML GA I +D+ GRR F+++ I SAL+PNY +L+ LRCLVG GLGG PV SS EF+P +R + + +W +G I + L + +G WRW LGL+ LPS++L+ Y++ PESPR+L ++GR +A+ ILE VA +N K PS + K+ + + ++ +++ +++D D+ + +P + R+TL LW+V+F FSY+GLV L Sbjct: 72 GMLVGAYSWGIVSDKHGRRKGFLITATITSGAGFLSALSPNYTSLILLRCLVGVGLGGG-PVLSSWFLEFIPAPNRGTWMVVFSAFWTLGTILEASLAWFVMPTLG-----WRWLLGLSSLPSSLLLVFYWLAPESPRYLCLKGRTTEAINILERVARLNGTKLPSGNLVSDLKIELSEKSTLSEDARLISPTENEDTSSKEMDSSDMGGISSLSMLLSPKLVRSTLLLWVVFFGNAFSYYGLVLL 311
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A803LVV0_CHEQI (MFS domain-containing protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LVV0_CHEQI) HSP 1 Score: 137 bits (345), Expect = 1.440e-32 Identity = 92/262 (35.11%), Postives = 142/262 (54.20%), Query Frame = 1 Query: 1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKK---PSVMEL-IGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVRELFRTPIMRR---ATLCLWMVWFFINFSYFGLVFLLPMYYGREGNSNDMYL 765 GM GA + +D+ GRR F+ S V+ + SA +PN+ L+ RCLVG GLG + PV + EF+P SR + +W +G I+ + L ++ +G WRW LGL+ LPS +L+ YF+ PESPR+L ++GR K+A+Q+LE +A +N K P V+ + Q+ +N TG EG A E D+ VR F+ + ++ TL LW+V+F F+Y+G+V LL + N+ D ++ Sbjct: 73 GMFVGAYSFGLISDKYGRRKGFVFSAVVTCAAGLLSAASPNFVVLLVARCLVGVGLGAS-PVLLTWFLEFVPAPSRGTWMVLFQAFWTIGSITEAALAWIIMPKLG-----WRWLLGLSVLPSFILLVFYFITPESPRYLCLKGRKKEAVQVLEKIARINGKELPPGVLVTDMEQEEINCPTKAVTGEEGAAPAKY------EDSDMSVVRS-FKVLLSKKLAPTTLLLWVVFFGNAFAYYGIV-LLTTELNTKDNTCDSHV 320
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Match: A0A251VJ52_HELAN (Putative major facilitator superfamily protein n=2 Tax=Helianthus annuus TaxID=4232 RepID=A0A251VJ52_HELAN) HSP 1 Score: 136 bits (343), Expect = 2.820e-32 Identity = 91/261 (34.87%), Postives = 134/261 (51.34%), Query Frame = 1 Query: 1 GMLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLVGFGLGGNLPVASSLAAEFLPTNSRAKGLSFITMYWGMGIISASLLGLVLSSVIGEEQPMWRWFLGLAGLPSAVLVAAYFVIPESPRFLSVRGRHKQAMQILENVAWVNKKPSVMELIGQKVVNHFGNGCTGGEGVVRALTLQESGGEQVDVGDVRE-----LFRTPIMRRATLCLWMVWFFINFSYFGLVFLLPMYYGREGNSNDMYLQ 768 GML GA + +D+ GRR F+++ + + S+LAPNY L+ LRCLVG GLGG PV SS EF+P SR + + +W +G I + + + +G WRW L + LPS++L+ Y V+PESPR+L ++GR +A ILE VA VN +P ++ T E A L GE V+ G + + +P + + TL LW+V+F FSY+GLV L + + +LQ Sbjct: 93 GMLVGAYSWGVVSDKHGRRNGFLITATVTCVAGLLSSLAPNYICLIILRCLVGIGLGGG-PVLSSWFLEFIPAPSRGTWMVVFSAFWTVGTIFEASVAWFVMPTLG-----WRWLLAFSSLPSSLLLIFYRVVPESPRYLCLKGRITEARIILEKVAKVNGQPLPEGVLVSDHEIQLNEKPTEAE---EAHLLSSPNGETVEHGTKQNGSTMAMLFSPELIKPTLLLWVVFFGNAFSYYGLVLLTTELHNGRNSCVPAHLQ 344 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10175.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10175.1.1 >prot_D-mesarthrocarpus_Contig10175.1.1 ID=prot_D-mesarthrocarpus_Contig10175.1.1|Name=mRNA_D-mesarthrocarpus_Contig10175.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=368bp MLFGAVFLSIYADRQGRRAAFILSLVIIFFGAIASALAPNYYALVALRCLback to top mRNA from alignment at D-mesarthrocarpus_Contig10175:114..4436+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10175.1.1 ID=mRNA_D-mesarthrocarpus_Contig10175.1.1|Name=mRNA_D-mesarthrocarpus_Contig10175.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4323bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10175:114..4436+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10175:114..4436+ >mRNA_D-mesarthrocarpus_Contig10175.1.1 ID=mRNA_D-mesarthrocarpus_Contig10175.1.1|Name=mRNA_D-mesarthrocarpus_Contig10175.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1104bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10175:114..4436+ (Discosporangium mesarthrocarpum MT17_79)back to top |