mRNA_D-mesarthrocarpus_Contig10172.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Match: D7FWH9_ECTSI (VPS9 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWH9_ECTSI) HSP 1 Score: 121 bits (303), Expect = 1.160e-29 Identity = 64/150 (42.67%), Postives = 88/150 (58.67%), Query Frame = 1 Query: 1 TTTTTTQEALRNMGQGKCPADIMDSLVRCCDIIFSMLQYAR------GRAVPGPAGESQGMAHTPGEERATGYESQGAADEFFPVFLFVVLKANTPRLHSMCKYVQAYYSPTGLISSRPGYCFVNLKSAVQYLMNVDAFALKMDPHVFAR 432 T T QE LR MG+G+CP DI+ +VRCCD +F+++ R GR + + G AD+F PV ++VVL+A PRLHSMC+YVQA++SP L+S RPGYCFV L+SAV++LM ++ A+ M F R Sbjct: 304 TVLTLAQEELRKMGRGRCPGDIVSRVVRCCDTLFALIDQGRRFKQGVGRXXXXXXXXXXXXXDSNVSSWRPERDPAGTADDFLPVLIYVVLRARVPRLHSMCEYVQAFHSPVALMS-RPGYCFVALRSAVEFLMTLNGAAVGMSEQDFRR 452
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Match: F0YG72_AURAN (VPS9 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YG72_AURAN) HSP 1 Score: 92.4 bits (228), Expect = 8.890e-22 Identity = 47/110 (42.73%), Postives = 68/110 (61.82%), Query Frame = 1 Query: 61 DIMDSLVRCCDIIFSMLQYARGRAVPGPAGESQGMAHTPGEERATGYESQGAADEFFPVFLFVVLKANTPRLHSMCKYVQAYYSPTGLISSRPGYCFVNLKSAVQYLMNV 390 D +D +VRC +IFS+L AR R ES+ AD+F P+F++VVL A+ PRLHS C YV+A+++PT L+S + GYCFVNL+SA+++L+ V Sbjct: 1 DKVDCVVRCASMIFSVLNLARAE----------------NSSRKGTSESRAGADDFLPIFIYVVLHADVPRLHSNCDYVEAFHNPTALMS-KAGYCFVNLRSAIEFLLTV 93
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Match: A0A8K1CLE3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLE3_PYTOL) HSP 1 Score: 98.2 bits (243), Expect = 4.410e-21 Identity = 53/138 (38.41%), Postives = 81/138 (58.70%), Query Frame = 1 Query: 19 QEALRNMGQGKCPADIMDSLVRCCDIIFSMLQYARGRAVPGPAGESQGMAHTPGEERATGYESQGAADEFFPVFLFVVLKANTPRLHSMCKYVQAYYSPTGLISSRPGYCFVNLKSAVQYLMNVDAFALKMDPHVFAR 432 ++ LR + + P D ++ +VRCC IIFS+L ARG + A+ PG AD+F PVF+++VL++ PRL+S C+Y+ AY + L+S + GYCFVNL+SA++++M VDA L + F R Sbjct: 445 EDELRRINSFRSPGDKINCIVRCCSIIFSVLNLARGDS-----------ANRPG------------ADDFLPVFIYIVLQSKIPRLYSNCEYIAAYRNSADLMS-KAGYCFVNLRSAIEFIMVVDASMLSVSEQDFER 558
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Match: A0A329SIN0_9STRA (VPS9 domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SIN0_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 4.220e-20 Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 19 QEALRNMGQGKCPADIMDSLVRCCDIIFSMLQYARGRAVPGPAGESQGMAHTPGEERATGYESQGAADEFFPVFLFVVLKANTPRLHSMCKYVQAYYSPTGLISSRPGYCFVNLKSAVQYLMNVDAFALKMDPHVFAR 432 ++ LR + + P D ++ +VRCC +IFS+L +RG + S+ AD+F PVF+++VL + PRLHS C+Y+ AY + L+S + GYCFVNL+SAV+++M +D L + F R Sbjct: 582 EDELRRINSFRSPGDKINCIVRCCSVIFSVLNLSRGDS-----------------------GSRPGADDFLPVFIYIVLHSQIPRLHSNCEYISAYRNQADLMS-KAGYCFVNLRSAVEFIMAMDGSMLSISDDEFQR 695
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Match: D0NF41_PHYIT (VPS9 domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NF41_PHYIT) HSP 1 Score: 95.1 bits (235), Expect = 5.140e-20 Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 19 QEALRNMGQGKCPADIMDSLVRCCDIIFSMLQYARGRAVPGPAGESQGMAHTPGEERATGYESQGAADEFFPVFLFVVLKANTPRLHSMCKYVQAYYSPTGLISSRPGYCFVNLKSAVQYLMNVDAFALKMDPHVFAR 432 ++ LR + + P D ++ +VRCC +IFS+L +RG + S+ AD+F PVF+++VL + PRLHS C+Y+ AY + L+S + GYCFVNL+SAV+++M +D L + F R Sbjct: 417 EDELRRINSFRSPGDKINCIVRCCSVIFSVLNLSRGDS-----------------------GSRPGADDFLPVFIYIVLHSQIPRLHSNCEYIAAYRNQADLMS-KAGYCFVNLRSAVEFIMAMDGSMLSISDDEFKR 530
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Match: A0A6A4EIB8_9STRA (VPS9 domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EIB8_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 7.820e-20 Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 19 QEALRNMGQGKCPADIMDSLVRCCDIIFSMLQYARGRAVPGPAGESQGMAHTPGEERATGYESQGAADEFFPVFLFVVLKANTPRLHSMCKYVQAYYSPTGLISSRPGYCFVNLKSAVQYLMNVDAFALKMDPHVFAR 432 ++ LR + + P D ++ +VRCC +IFS+L +RG + S+ AD+F PVF+++VL + PRLHS C+Y+ AY + L+S + GYCFVNL+SA++++M +D L + F R Sbjct: 566 EDELRRINSFRSPGDKINCIVRCCSVIFSVLNLSRGDS-----------------------GSRPGADDFLPVFIYIVLHSQIPRLHSNCEYISAYRNQADLMS-KAGYCFVNLRSAIEFIMVMDGSMLSLSGDEFQR 679
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Match: G4Z8U2_PHYSP (VPS9 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z8U2_PHYSP) HSP 1 Score: 94.7 bits (234), Expect = 8.080e-20 Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 19 QEALRNMGQGKCPADIMDSLVRCCDIIFSMLQYARGRAVPGPAGESQGMAHTPGEERATGYESQGAADEFFPVFLFVVLKANTPRLHSMCKYVQAYYSPTGLISSRPGYCFVNLKSAVQYLMNVDAFALKMDPHVFAR 432 ++ LR + + P D ++ +VRCC +IFS+L +RG + S+ AD+F PVF+++VL + PRLHS C+Y+ AY + L+S + GYCFVNL+SA++++M +D L + F R Sbjct: 569 EDELRRINSFRSPGDKINCIVRCCSVIFSVLNLSRGDS-----------------------GSRPGADDFLPVFIYIVLHSQIPRLHSNCEYISAYRNQADLMS-KAGYCFVNLRSAIEFIMVMDGSMLSISDDEFQR 682
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Match: A0A2D4CFQ8_PYTIN (VPS9 domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CFQ8_PYTIN) HSP 1 Score: 93.2 bits (230), Expect = 2.620e-19 Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1 Query: 19 QEALRNMGQGKCPADIMDSLVRCCDIIFSMLQYARGRAVPGPAGESQGMAHTPGEERATGYESQGAADEFFPVFLFVVLKANTPRLHSMCKYVQAYYSPTGLISSRPGYCFVNLKSAVQYLMNVDAFALKMDPHVFAR 432 ++ LR + + P D ++ +VRCC IIF +L +RG + ++ PG AD+F PVF+++VL + PRLHS C+Y+ AY + L+S + GYCFVNL+SA++++ VDA L + F R Sbjct: 471 EDELRRINACRAPGDKINCIVRCCSIIFGVLNLSRGDS-----------SNRPG------------ADDFLPVFIYIVLXSKIPRLHSNCEYIAAYRNSADLMS-KAGYCFVNLRSAIEFINVVDASMLSISDEDFKR 584
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Match: A0A024U9K7_9STRA (VPS9 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U9K7_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 3.590e-19 Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 19 QEALRNMGQGKCPADIMDSLVRCCDIIFSMLQYARGRAVPGPAGESQGMAHTPGEERATGYESQGAADEFFPVFLFVVLKANTPRLHSMCKYVQAYYSPTGLISSRPGYCFVNLKSAVQYLMNVDAFALKMDPHVF 426 Q+ LR++ + + P D ++ +VRCC IIFS+L ARG V S+ AD+F PVF+++VL + P L S +Y+ AY +P L+S + GYCFVNL+SA+++++ +DA L +D F Sbjct: 474 QDELRHINEYRSPGDKINCIVRCCSIIFSVLNLARGSDVM----------------------SRPGADDFLPVFIYLVLHSQVPSLVSNAEYIAAYRNPADLMS-KAGYCFVNLRSAIEFILVLDASMLSIDETEF 586
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Match: A0A6A5ABS2_9STRA (VPS9 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABS2_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 4.900e-19 Identity = 50/136 (36.76%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 19 QEALRNMGQGKCPADIMDSLVRCCDIIFSMLQYARGRAVPGPAGESQGMAHTPGEERATGYESQGAADEFFPVFLFVVLKANTPRLHSMCKYVQAYYSPTGLISSRPGYCFVNLKSAVQYLMNVDAFALKMDPHVF 426 Q+ LR + + P D ++ +VRCC IIFS+L ARG G++ S+ AD+F PVF+++VL + P L S +Y+ AY +P L+S + GYCFVNL+SA+++++ +DA L +D F Sbjct: 160 QDELRRINDCRSPGDKINCIVRCCSIIFSVLNLARG-------GDAL---------------SRPGADDFLPVFIYLVLHSQVPNLVSNAEYIAAYRNPADLMS-KAGYCFVNLRSAIEFILVLDATMLSVDAAEF 272 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10172.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10172.1.1 >prot_D-mesarthrocarpus_Contig10172.1.1 ID=prot_D-mesarthrocarpus_Contig10172.1.1|Name=mRNA_D-mesarthrocarpus_Contig10172.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=145bp TTTTTTQEALRNMGQGKCPADIMDSLVRCCDIIFSMLQYARGRAVPGPAGback to top mRNA from alignment at D-mesarthrocarpus_Contig10172:3539..4248- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10172.1.1 ID=mRNA_D-mesarthrocarpus_Contig10172.1.1|Name=mRNA_D-mesarthrocarpus_Contig10172.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=710bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10172:3539..4248- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10172:3539..4248- >mRNA_D-mesarthrocarpus_Contig10172.1.1 ID=mRNA_D-mesarthrocarpus_Contig10172.1.1|Name=mRNA_D-mesarthrocarpus_Contig10172.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=435bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10172:3539..4248- (Discosporangium mesarthrocarpum MT17_79)back to top |