mRNA_D-mesarthrocarpus_Contig10170.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10170.1.1 vs. uniprot
Match: D7G2C6_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C6_ECTSI) HSP 1 Score: 103 bits (256), Expect = 4.530e-23 Identity = 51/82 (62.20%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 85 EKFMLPSWHYLLLSGRQFKLDFQWSGLDLLLLQDPRASFNHGGGTNVLALRSSGRLDVSSSGAGENISASLSDACLLPCVYA 330
EKFMLP WHYL LSGR +DF+WS +DL+L+QDP A G NVLALRS+G L VSSSG GE++ L DA LLPC YA
Sbjct: 981 EKFMLPGWHYLALSGRSLSMDFRWSNMDLVLMQDPTARQGRDTGKNVLALRSTGTLTVSSSGVGESVDVQLRDASLLPCFYA 1062
BLAST of mRNA_D-mesarthrocarpus_Contig10170.1.1 vs. uniprot
Match: A0A6H5KZA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA2_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.120e-22 Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 85 EKFMLPSWHYLLLSGRQFKLDFQWSGLDLLLLQDPRASFNHGGGTNVLALRSSGRLDVSSSGAGENISASLSDACLLPCVYA 330
EKFMLP WHYL LSGR +DF+WS +D++L+QDP A G NVLALRS+G L VSSSG GE++ L DA LLPC YA
Sbjct: 998 EKFMLPGWHYLALSGRSLSMDFRWSNMDVVLMQDPTARQGRDTGKNVLALRSTGTLMVSSSGVGESVDVQLRDASLLPCFYA 1079 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10170.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10170.1.1 >prot_D-mesarthrocarpus_Contig10170.1.1 ID=prot_D-mesarthrocarpus_Contig10170.1.1|Name=mRNA_D-mesarthrocarpus_Contig10170.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=125bp QDAAGSAGRDRDGGVGGGGGQEDVGGEGEKFMLPSWHYLLLSGRQFKLDFback to top mRNA from alignment at D-mesarthrocarpus_Contig10170:995..1371+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10170.1.1 ID=mRNA_D-mesarthrocarpus_Contig10170.1.1|Name=mRNA_D-mesarthrocarpus_Contig10170.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=377bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10170:995..1371+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10170:995..1371+ >mRNA_D-mesarthrocarpus_Contig10170.1.1 ID=mRNA_D-mesarthrocarpus_Contig10170.1.1|Name=mRNA_D-mesarthrocarpus_Contig10170.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=375bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10170:995..1371+ (Discosporangium mesarthrocarpum MT17_79)back to top |