mRNA_D-mesarthrocarpus_Contig1017.8.5 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Match: D7FPH2_ECTSI (UMP-CMP kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPH2_ECTSI) HSP 1 Score: 288 bits (737), Expect = 1.230e-89 Identity = 145/237 (61.18%), Postives = 185/237 (78.06%), Query Frame = 1 Query: 433 QTIAPRKRPVIFVLGGPGSGKGTQSQRLAKKYGYIHLSAGELLREERESGSEDGKLINEYINEGRIVPVAISLGLLKRAMDQCPARACFLIDGFPRNSDNMDGWESMMVDTAEVRCVLFLDCPEAVLEERLLSRGKTSGRSDDNVLTARKRFKTYVETTLPVVDIFEKKGLVVRVEGSLGVDEVFENVCEKLRPVLEEELLSVNQALLLAEATGDWATFEELCSSSMTSV--GGLAS 1137 Q A K PV+FVLGGPGSGKGTQ +RLAK+YGY+HLSAGELLR+ER SGS DG+LI++YI EGRIVPVAISL LL++AM+ + FLIDGFPRN DNM+GW+ M D A++R VLFL CPE VLE+RLLSRGK+SGR+DDN TA++RF+TYVE TLPVV+ F++KG+V RV+G+ ++ VF +V L+ V E+E+L N+ + A TGDWA + +LC+ MT V GGLA+ Sbjct: 166 QDGAASKPPVVFVLGGPGSGKGTQCERLAKEYGYVHLSAGELLRQERASGSSDGQLIDDYIAEGRIVPVAISLALLRKAMETSEPHSRFLIDGFPRNRDNMEGWDEAMGDVADIRSVLFLYCPEDVLEKRLLSRGKSSGRTDDNAETAKRRFQTYVEMTLPVVEEFQQKGIVPRVDGNQDIESVFRDVLLGLKSVHEKEVLDANRLAVEAVCTGDWAAYAQLCAPGMTEVLGGGLAA 402
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Match: A0A835YW75_9STRA (UMP-CMP kinase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW75_9STRA) HSP 1 Score: 261 bits (667), Expect = 3.500e-81 Identity = 130/222 (58.56%), Postives = 165/222 (74.32%), Query Frame = 1 Query: 460 VIFVLGGPGSGKGTQSQRLAKKYGYIHLSAGELLREERESGSEDGKLINEYINEGRIVPVAISLGLLKRAMDQCPARACFLIDGFPRNSDNMDGWESMMVDTAEVRCVLFLDCPEAVLEERLLSRGKTSGRSDDNVLTARKRFKTYVETTLPVVDIFEKKGLVVRVEGSLGVDEVFENVCEKLRPVLEEELLSVNQALLLAEATGDWATFEELCSSSMTSVG 1125 V+FVLGGPGSGKGTQ +RL+++ GY+HLSAGELLR+ RESGSE+G L++EY+ EGRIVPV +SLGLL++AM FLIDGFPRN DN+DGWE +M A+V CVLFL+CPE+VLE RLL RG +SGRSDDN+ +ARKRF+TYVETTLPVV+ F+ GLV RV+GS +D VF N C L +E E+++ +A + A D A + +C T G Sbjct: 7 VVFVLGGPGSGKGTQCERLSRELGYVHLSAGELLRQARESGSEEGALLDEYLREGRIVPVELSLGLLRKAMIASGGTR-FLIDGFPRNQDNLDGWERIMGKEADVTCVLFLECPESVLEARLLHRGLSSGRSDDNLESARKRFRTYVETTLPVVEHFQSCGLVRRVDGSQDMDTVFANTCAALSDAMEREVMAATRAQIEAATDNDTAAYAAMCCDDATGAG 227
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Match: A0A7S2XUB9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUB9_9STRA) HSP 1 Score: 237 bits (604), Expect = 9.160e-72 Identity = 118/213 (55.40%), Postives = 160/213 (75.12%), Query Frame = 1 Query: 481 PGSGKGTQSQRLAKKYGYIHLSAGELLREERESGSEDGKLINEYINEGRIVPVAISLGLLKRAMDQCPARACFLIDGFPRNSDNMDGWESMMVDTAEVRCVLFLDCPEAVLEERLLSRGKTSGRSDDNVLTARKRFKTYVETTLPVVDIFEKKGLVVRVEGSLGVDE-VFENVCEKLRPVLEEELLSVNQALLLAEATGDWATFEELCSSSMT 1116 PG+GKGTQ + + ++YG++HLSAGELLR+ER SGS DG++I ++I EG+IVPVA++LGLL++AM+ FLIDGFPRN DN+ GWE +M A+V CVLF++CPEA LE RLL RG+TSGR+DDN+ +ARKRFKTYVE+T+PVV F+ G V RV G++G E VFE + P L++ELL + + LL A + G+W + +LC S+T Sbjct: 1 PGAGKGTQCEMMVQRYGFVHLSAGELLRQERASGSPDGQMIEDFIKEGKIVPVAVTLGLLRKAMEASKGNR-FLIDGFPRNWDNIQGWEEVMGGQAQVDCVLFIECPEAELERRLLHRGETSGRTDDNIESARKRFKTYVESTMPVVHHFDVAGKVRRVPGAVGGPEAVFERTRGAVEPFLQDELLQLTKRLLDAISEGNWDIYTDLCHESLT 212
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Match: A0A485LB63_9STRA (UMP-CMP kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB63_9STRA) HSP 1 Score: 231 bits (588), Expect = 2.200e-69 Identity = 111/221 (50.23%), Postives = 159/221 (71.95%), Query Frame = 1 Query: 460 VIFVLGGPGSGKGTQSQRLAKKYGYIHLSAGELLREERESGSEDGKLINEYINEGRIVPVAISLGLLKRAMDQCPARACFLIDGFPRNSDNMDGWESMMVDTAEVRCVLFLDCPEAVLEERLLSRGKTSGRSDDNVLTARKRFKTYVETTLPVVDIFEKKGLVVRVEGSLGVDEVFENVCEKLRPVLEEELLSVNQALLLAEATGDWATFEELCSSSMTSV 1122 V+FVLGGPGSGKGTQ ++ K+G++HLSAG+LLREER SGS +G++I+ I EG IVPV ++L L+++AM R FLIDGFPRN DN+ GWE+ M D +V VLF DCPE +E RLL RGKTSGR+DDN+ RKRFKTY+E+T+P+++ F + V R+ DEVF+ + + P++++ L+ + Q+LL + DWAT+++LC S++++ Sbjct: 9 VLFVLGGPGSGKGTQCAKIVAKFGFVHLSAGDLLREERASGSPNGEMIDRMIREGAIVPVKVTLDLIRKAMI-ASGRDLFLIDGFPRNFDNLQGWEAEMADV-DVAGVLFYDCPEEEMERRLLERGKTSGRTDDNIEAIRKRFKTYLESTMPIIEHFATQNKVFRLSAIPPPDEVFQETEKVIEPIVKQHLVDITQSLLDSVFQSDWATYQDLCDESISAI 227
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Match: W4G8P5_9STRA (UMP-CMP kinase n=6 Tax=Aphanomyces TaxID=100860 RepID=W4G8P5_9STRA) HSP 1 Score: 228 bits (580), Expect = 3.580e-69 Identity = 110/221 (49.77%), Postives = 156/221 (70.59%), Query Frame = 1 Query: 460 VIFVLGGPGSGKGTQSQRLAKKYGYIHLSAGELLREERESGSEDGKLINEYINEGRIVPVAISLGLLKRAMDQCPARACFLIDGFPRNSDNMDGWESMMVDTAEVRCVLFLDCPEAVLEERLLSRGKTSGRSDDNVLTARKRFKTYVETTLPVVDIFEKKGLVVRVEGSLGVDEVFENVCEKLRPVLEEELLSVNQALLLAEATGDWATFEELCSSSMTSV 1122 V+FVLGGPGSGKGTQ ++ K+G++HLSAG+LLREER SGS +G +I+ I +G IVPV ++L L+++AM + R FLIDGFPRN DN++GWE+ M D +V VLF DCPE +E+RLL RGKTSGR+DDN+ RKRF TY+E+T+P+++ F K V R+ D VF+ + + P+++ L+ Q LL A GDWAT+++LC ++++ Sbjct: 10 VLFVLGGPGSGKGTQCSKIVAKFGFVHLSAGDLLREERSSGSPNGDMIDRMIRDGAIVPVKVTLDLIRKAMLES-GRDLFLIDGFPRNFDNLEGWEAEMTDV-DVAGVLFYDCPEEEMEKRLLERGKTSGRTDDNIDAIRKRFTTYLESTMPIIEHFALKDQVFRISSIPSPDVVFDETAKVIEPIVKRHLVDSTQRLLDAVFQGDWATYKDLCDECLSAI 228
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Match: F0WKG9_9STRA (UMP-CMP kinase n=3 Tax=Albugo TaxID=65356 RepID=F0WKG9_9STRA) HSP 1 Score: 225 bits (574), Expect = 5.980e-69 Identity = 114/194 (58.76%), Postives = 146/194 (75.26%), Query Frame = 1 Query: 445 PRKRPVIFVLGGPGSGKGTQSQRLAKKYGYIHLSAGELLREERESGSEDGKLINEYINEGRIVPVAISLGLLKRAMDQCPARACFLIDGFPRNSDNMDGWESMMVDTA-EVRCVLFLDCPEAVLEERLLSRGKTSGRSDDNVLTARKRFKTYVETTLPVVDIFEKKGLVVRVEGSLGVDEVFENVCEKLRPVLE 1023 P KR ++FVLGGPG+GKGTQ +L +KYG++HLSAG+LLREER+SGSE+G+LI+ I EG+IVPV I+LGLL+RAM Q R FLIDGFPRN DN+ GW M DT V VLF DC E V+E RL+ RG+TSGR+DDN RKRF+TY+E+TLP+++ F K V +V+ + D VFE C+KL+P+LE Sbjct: 5 PAKR-ILFVLGGPGAGKGTQCSKLVQKYGFVHLSAGDLLREERQSGSENGELIDMMIKEGQIVPVKITLGLLQRAMLQ-NERERFLIDGFPRNFDNLQGWNEAMPDTQFHVEGVLFFDCSEIVMESRLIERGRTSGRTDDNAEAIRKRFRTYLESTLPIINYFAKSNKVYQVDATSSPDSVFEATCQKLKPILE 196
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Match: A0A6G0WMC9_9STRA (UMP-CMP kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMC9_9STRA) HSP 1 Score: 228 bits (582), Expect = 1.730e-68 Identity = 111/221 (50.23%), Postives = 156/221 (70.59%), Query Frame = 1 Query: 460 VIFVLGGPGSGKGTQSQRLAKKYGYIHLSAGELLREERESGSEDGKLINEYINEGRIVPVAISLGLLKRAMDQCPARACFLIDGFPRNSDNMDGWESMMVDTAEVRCVLFLDCPEAVLEERLLSRGKTSGRSDDNVLTARKRFKTYVETTLPVVDIFEKKGLVVRVEGSLGVDEVFENVCEKLRPVLEEELLSVNQALLLAEATGDWATFEELCSSSMTSV 1122 V+FVLGGPGSGKGTQ ++ ++G++HLSAG+LLREER SGS +G +I+ I EG IVPV ++L L+++AM R FLIDGFPRN DN++GWE+ M D +V VLF DCPE +E RLL RGKTSGR+DDN+ RKRFKTY+++T+P+++ F K V R+ D VFE + + P++++ L+ Q LL A DWAT+++LC S++++ Sbjct: 9 VLFVLGGPGSGKGTQCAKIVSQFGFVHLSAGDLLREERASGSPNGDMIDRMIREGAIVPVKVTLDLIRKAM-VASGRDLFLIDGFPRNFDNLEGWEAEMTDV-DVAGVLFYDCPEEEMERRLLERGKTSGRTDDNIDAIRKRFKTYLDSTMPIIEHFAAKDQVFRISAIPPPDVVFEETSKVIEPIVKQHLVDTTQRLLDAVFESDWATYQDLCDVSISAI 227
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Match: A0A7S2SV26_9STRA (UMP-CMP kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV26_9STRA) HSP 1 Score: 227 bits (578), Expect = 2.670e-68 Identity = 116/187 (62.03%), Postives = 143/187 (76.47%), Query Frame = 1 Query: 460 VIFVLGGPGSGKGTQSQRLAKKYGYIHLSAGELLREERESGSEDGKLINEYINEGRIVPVAISLGLLKRAMDQCPARACFLIDGFPRNSDNMDGWESMMVDTAEVRCVLFLDCPEAVLEERLLSRGKTSGRSDDNVLTARKRFKTYVETTLPVVDIFEKKGLVVRVEGSLGVDEVFENVCEKLRPVL 1020 VIFVLGGPG+GKGTQ +L +G +HLSAGELLR+ER SGS DG+LI EY+ +GRIVPV+ISLGLL++AMD A +CFL+DGFPRN DN++GW +M D+AEV CVLFLDCPE E RLL RG+TSGRSDDN+ +ARKRFKT+ + T+PVV +E GLV RV DEV+ + L P+L Sbjct: 84 VIFVLGGPGAGKGTQCAKLVDDFGLVHLSAGELLRKERASGSPDGQLIEEYLRDGRIVPVSISLGLLRQAMDG-DAGSCFLVDGFPRNWDNVEGWNELMQDSAEVLCVLFLDCPEEEQERRLLIRGETSGRSDDNLESARKRFKTFHQETMPVVGHYESLGLVRRVPADGMQDEVYAHTRAALLPLL 269
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Match: W4GAG3_9STRA (UMP-CMP kinase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAG3_9STRA) HSP 1 Score: 228 bits (580), Expect = 3.550e-68 Identity = 110/221 (49.77%), Postives = 156/221 (70.59%), Query Frame = 1 Query: 460 VIFVLGGPGSGKGTQSQRLAKKYGYIHLSAGELLREERESGSEDGKLINEYINEGRIVPVAISLGLLKRAMDQCPARACFLIDGFPRNSDNMDGWESMMVDTAEVRCVLFLDCPEAVLEERLLSRGKTSGRSDDNVLTARKRFKTYVETTLPVVDIFEKKGLVVRVEGSLGVDEVFENVCEKLRPVLEEELLSVNQALLLAEATGDWATFEELCSSSMTSV 1122 V+FVLGGPGSGKGTQ ++ K+G++HLSAG+LLREER SGS +G +I+ I +G IVPV ++L L+++AM + R FLIDGFPRN DN++GWE+ M D +V VLF DCPE +E+RLL RGKTSGR+DDN+ RKRF TY+E+T+P+++ F K V R+ D VF+ + + P+++ L+ Q LL A GDWAT+++LC ++++ Sbjct: 10 VLFVLGGPGSGKGTQCSKIVAKFGFVHLSAGDLLREERSSGSPNGDMIDRMIRDGAIVPVKVTLDLIRKAMLES-GRDLFLIDGFPRNFDNLEGWEAEMTDV-DVAGVLFYDCPEEEMEKRLLERGKTSGRTDDNIDAIRKRFTTYLESTMPIIEHFALKDQVFRISSIPSPDVVFDETAKVIEPIVKRHLVDSTQRLLDAVFQGDWATYKDLCDECLSAI 228
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Match: UPI00106D6E0D (UMP-CMP kinase-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106D6E0D) HSP 1 Score: 219 bits (558), Expect = 1.410e-66 Identity = 102/188 (54.26%), Postives = 139/188 (73.94%), Query Frame = 1 Query: 460 VIFVLGGPGSGKGTQSQRLAKKYGYIHLSAGELLREERESGSEDGKLINEYINEGRIVPVAISLGLLKRAMDQCPARACFLIDGFPRNSDNMDGWESMMVDTAEVRCVLFLDCPEAVLEERLLSRGKTSGRSDDNVLTARKRFKTYVETTLPVVDIFEKKGLVVRVEGSLGVDEVFENVCEKLRPVLE 1023 V FVLGGPG+GKGTQ +++ + +G++HLSAGELLR+ER+SGS+DG LI +YI EG+IVPVAI++ LL++AM P + FL+DGFPRN DN+ GW M +V+CVLF DCPE R++ RGKTSGR+DDN+ + RKRFKTY E T+P++ +EK LV + + DE+FE+V E + +LE Sbjct: 8 VAFVLGGPGAGKGTQCEKIVETFGFVHLSAGELLRQERDSGSKDGNLIQDYIKEGKIVPVAITISLLQKAMKNSPVKR-FLVDGFPRNEDNLQGWSERMDGIVDVKCVLFFDCPEEECIRRIVERGKTSGRTDDNIDSLRKRFKTYKEQTMPIIKYYEKLNLVKTIPAARTPDEIFEDVKEAINAILE 194 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1017.8.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1017.8.5 >prot_D-mesarthrocarpus_Contig1017.8.5 ID=prot_D-mesarthrocarpus_Contig1017.8.5|Name=mRNA_D-mesarthrocarpus_Contig1017.8.5|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=402bp MSRALRVLVSLSAMSRVSSLAFSSIPKPSCGQMIRAWTASSQACTSARRGback to top mRNA from alignment at D-mesarthrocarpus_Contig1017:14379..17430+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1017.8.5 ID=mRNA_D-mesarthrocarpus_Contig1017.8.5|Name=mRNA_D-mesarthrocarpus_Contig1017.8.5|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3052bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1017:14379..17430+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1017:14379..17430+ >mRNA_D-mesarthrocarpus_Contig1017.8.5 ID=mRNA_D-mesarthrocarpus_Contig1017.8.5|Name=mRNA_D-mesarthrocarpus_Contig1017.8.5|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1206bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1017:14379..17430+ (Discosporangium mesarthrocarpum MT17_79)back to top |