Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 0 |
| Model size | 666 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 666 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789160.2108247-CDS-D-mesarthrocarpus_Contig1017:9819..9902 | 1680789160.2108247-CDS-D-mesarthrocarpus_Contig1017:9819..9902 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig1017 9820..9902 - |
| 1680789160.2215347-CDS-D-mesarthrocarpus_Contig1017:10668..11251 | 1680789160.2215347-CDS-D-mesarthrocarpus_Contig1017:10668..11251 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig1017 10669..11251 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1017.5.1 >prot_D-mesarthrocarpus_Contig1017.5.1 ID=prot_D-mesarthrocarpus_Contig1017.5.1|Name=mRNA_D-mesarthrocarpus_Contig1017.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=222bp
GRGTATRGASGHPQPGNRGSREPGEPGMPRGMRASLPGAGGAAPRRGGSG
GGMPGGDSTVKQQSSQCSAPRGSRGMSARVRGAQVLPRAAECAKVRLPGP
GSPGSGHRQCQGPGAARGVHNAALGHVHVPTGRPGAAEGGLGGCSQPCRQ
SSWELQDAEEGRRAGGSAAGHAGLPQVLPQPAGAREEGPPPHPAGLTWEG
HDSRYQQQWAWPSCGAHSRGG* back to topmRNA from alignment at D-mesarthrocarpus_Contig1017:9820..11251- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-mesarthrocarpus_Contig1017.5.1 ID=mRNA_D-mesarthrocarpus_Contig1017.5.1|Name=mRNA_D-mesarthrocarpus_Contig1017.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1432bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1017:9820..11251- (Discosporangium mesarthrocarpum MT17_79)
GGGCGGGGCACTGCAACGCGTGGGGCTTCGGGCCATCCGCAACCTGGCAA
CAGGGGCAGCAGGGAACCGGGAGAGCCTGGGATGCCACGGGGCATGCGAG
CGAGTCTCCCGGGCGCTGGAGGTGCTGCCCCTCGACGTGGGGGTTCAGGC
GGAGGCATGCCAGGTGGTGACAGCACTGTCAAGCAACAATCCAGCCAATG
CAGCGCGCCTCGGGGCAGCAGGGGCATGTCCGCTCGTGTTCGGGGTGCTC
AAGTCCTACCCAGGGCAGCTGAGTGTGCAAAAGTTCGCCTGCCAGGCCCT
GGCAGCCCTGGCAGTGGACACAGGCAATGCCAAGGCCCTGGGGCAGCTCG
GGGTGTGCACAATGCTGCCCTGGGTCATGTTCACGTTCCCACTGGAAGAC
CAGGGGCTGCAGAGGGCGGCCTTGGCGGCTGCAGCCAACCTTGCCGCCAG
TCATCCTGGGAACTCCAAGACGCTGAGGAGGGCCGGCGTGCGGGAGGCAG
TGCGGCGGGTCATGCAGGGCTCCCCCAAGTATTGCCGCAACCTGCAGGAG
CTCGGGAGGAGGGCCCTCCACCACACCCAGCAGGTCCGTGCATTGCTACG
GCATGCCCCCCTTGATCTTGTGATCTTGATTTCTGGGGAGGATGGGGTAG
GGGGTGGGCCCCTGCAGTGTGGGGCAGGGATCAGGCAGACGGATTACGAG
GGAGGGGAGGGATGGAGAGCAACAGATGCCCACAACATGAGTTTTTCTTC
TTGCGAGCTGGGCAGGAGCAGAGGGGCCATGGGATGGGAGGGGCTTCCAT
CTTGGGACATGCTCTGACCATGCCTTGTCCTAGTCTTCGCCTAAACACGC
CAGTGAATGGTGTTGAGCTCCCCCTGCAGTGTGTACAGTACAGTAGCTGC
AACTCATGCATCTCATACCAGCCCCAGGGCCACCTCCACCTCCGCCTTTG
CCTCCGGCCCTAAGAAATAGGAGATGAGAGGGGCCCCCGTTGCAGGAAGC
CAACACAATACCATGGCACGTTAGTATGGGTGCTATAATGTACCGTCTGT
ACCTCGTTGTTTGCCCCTACAACCCTAACCCTCAGATTCTGTAAAAAAAA
ATGCATGCTCCTAAGAGCTTTGAAGCGGTGGTGTATTTGGGGGGATTTGC
TACAACACATTACTGTACTGCACTGTAGTGCAGCAGTAGATTGTTCAAAG
TGAGGAAATACAAACATTATAAATGCATCTCTCCTCAAACAACCGACCAC
ATGGCCCCTGCACCACTCACACCCCTTCCTTTAAATGCCCCACACAACGC
CCCTTACCCCCCCCCCCCCCCTCTGCCGTGCCCTTAAAAGGGCCTGCAGG
CCTCACTTGGGAAGGGCACGACTCCCGTTACCAACAGCAGTGGGCCTGGC
CTTCCTGTGGAGCTCACTCAAGAGGCGGTTGA back to topCoding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1017:9820..11251- >mRNA_D-mesarthrocarpus_Contig1017.5.1 ID=mRNA_D-mesarthrocarpus_Contig1017.5.1|Name=mRNA_D-mesarthrocarpus_Contig1017.5.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=666bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1017:9820..11251- (Discosporangium mesarthrocarpum MT17_79)
GGGCGGGGCACTGCAACGCGTGGGGCTTCGGGCCATCCGCAACCTGGCAA
CAGGGGCAGCAGGGAACCGGGAGAGCCTGGGATGCCACGGGGCATGCGAG
CGAGTCTCCCGGGCGCTGGAGGTGCTGCCCCTCGACGTGGGGGTTCAGGC
GGAGGCATGCCAGGTGGTGACAGCACTGTCAAGCAACAATCCAGCCAATG
CAGCGCGCCTCGGGGCAGCAGGGGCATGTCCGCTCGTGTTCGGGGTGCTC
AAGTCCTACCCAGGGCAGCTGAGTGTGCAAAAGTTCGCCTGCCAGGCCCT
GGCAGCCCTGGCAGTGGACACAGGCAATGCCAAGGCCCTGGGGCAGCTCG
GGGTGTGCACAATGCTGCCCTGGGTCATGTTCACGTTCCCACTGGAAGAC
CAGGGGCTGCAGAGGGCGGCCTTGGCGGCTGCAGCCAACCTTGCCGCCAG
TCATCCTGGGAACTCCAAGACGCTGAGGAGGGCCGGCGTGCGGGAGGCAG
TGCGGCGGGTCATGCAGGGCTCCCCCAAGTATTGCCGCAACCTGCAGGAG
CTCGGGAGGAGGGCCCTCCACCACACCCAGCAGGCCTCACTTGGGAAGGG
CACGACTCCCGTTACCAACAGCAGTGGGCCTGGCCTTCCTGTGGAGCTCA
CTCAAGAGGCGGTTGA back to top
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