mRNA_D-mesarthrocarpus_Contig1017.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Match: A0A6H5L3G3_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE) HSP 1 Score: 149 bits (377), Expect = 5.410e-40 Identity = 79/186 (42.47%), Postives = 112/186 (60.22%), Query Frame = 1 Query: 1 QDTLDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAIIRGA-RSSHVFNVHHDHYVLEHFTIDGQC-GD-------GSVREHYRNKLIYVCGTHRVPRLIEGKHLTQRQSGQAYLSSVDGLVVRHMTLANCGGECVRLKCFVTHTNFHHNTVTNCGVYDTRFQAGALNGEAV 531 QD LD+V PGD I LS G+Y++DL TRTDG AD PITIRG G ++RGA S+ V + HD+Y++E FT++G GD S ++ +R+ LIY + + T+R G Y+S++DGLV+R+M + N GGEC+RL+ VT+ + N +T+CG+YD R NGE V Sbjct: 34 QDALDVVNPGDVIELSNGDYWEDLKTRTDGTADMPITIRGAGGTGDKENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGHAEGDPDRDADSDSAQDMWRDVLIYA---------VANREPTERAGG--YISAIDGLVIRNMAVTNAGGECIRLRDHVTNAEVYSNHITDCGIYDFREDGDGKNGEGV 208
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Match: A0A0G1AW46_9BACT (Secreted protein n=3 Tax=Candidatus Daviesbacteria TaxID=1752718 RepID=A0A0G1AW46_9BACT) HSP 1 Score: 130 bits (328), Expect = 7.950e-33 Identity = 70/177 (39.55%), Postives = 97/177 (54.80%), Query Frame = 1 Query: 1 QDTLDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAIIRGARSSHVFNVHHDHYVLEHFTIDGQCGDGSVREHYRNKLIYVCGTHRVPRLIEGKHLTQRQSGQAYLSSVDGLVVRHMTLANCGGECVRLKCFVTHTNFHHNTVTNCGVYDTRFQAGALNGEAV 531 Q +D+ QPGD I LS G Y QD+V++ +G +PITI+GL + A+++G ++ + ++HD L+ FT+DG G + YR+KLIY G + L+ V G V +MTL N GGEC+R + F T NTVTNCGVYD +F AG NGE V Sbjct: 66 QKAVDLAQPGDNILLSPGNYLQDIVSKRNGQDLSPITIKGL------STAVVKGGGNARIIEINHDFITLDGFTVDGLFGSSGSQSGYRDKLIYFLGKDK-------------------LAGVTGARVLNMTLKNAGGECMRFRYFATKNEVASNTVTNCGVYDFKFNAGGKNGEGV 217
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Match: A0A0G0X4X9_9BACT (Secreted protein n=1 Tax=Candidatus Daviesbacteria bacterium GW2011_GWA2_40_9 TaxID=1618424 RepID=A0A0G0X4X9_9BACT) HSP 1 Score: 127 bits (319), Expect = 1.320e-31 Identity = 69/177 (38.98%), Postives = 92/177 (51.98%), Query Frame = 1 Query: 1 QDTLDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAIIRGARSSHVFNVHHDHYVLEHFTIDGQCGDGSVREHYRNKLIYVCGTHRVPRLIEGKHLTQRQSGQAYLSSVDGLVVRHMTLANCGGECVRLKCFVTHTNFHHNTVTNCGVYDTRFQAGALNGEAV 531 Q +D+ Q G+TI L+ G Y QD++T+ +G +D PI I G A+I+G +F ++HD L FTIDG G S YR+KL+YV G+ S V GL V MTL N GGEC+RL+ F + NT+TNCGVYD +F G NGE + Sbjct: 120 QKAVDLAQGGETIALAPGTYSQDIITKRNGTSDKPIIISG------PKEAVIKGGGKGRIFEINHDSITLRGFTIDGLFGSSSSSSGYRDKLLYV-------------------QGKETKSGVTGLKVLGMTLKNAGGECIRLRYFAQNNEIAGNTITNCGVYDFKFNGGGKNGEGI 271
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Match: A0A1Y0IFB0_9GAMM (Secreted protein n=2 Tax=Oleiphilus messinensis TaxID=141451 RepID=A0A1Y0IFB0_9GAMM) HSP 1 Score: 122 bits (306), Expect = 6.830e-30 Identity = 67/174 (38.51%), Postives = 92/174 (52.87%), Query Frame = 1 Query: 10 LDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAIIRGARSSHVFNVHHDHYVLEHFTIDGQCGDGSVREHYRNKLIYVCGTHRVPRLIEGKHLTQRQSGQAYLSSVDGLVVRHMTLANCGGECVRLKCFVTHTNFHHNTVTNCGVYDTRFQAGALNGEAV 531 L +PG+ + L GEYF+D+ T G D PI I G S AI++GA+ + +F + H + L +F+IDG+ G G+ E +R+ L++V GQ S G+V+R M L N GGECVRLK FVT N + NCGVYD +F AG NGE + Sbjct: 84 LSYAEPGERVYLMPGEYFEDIKTVRSGTPDQPILIYG------SKKAIVKGAQKNRIFQIFHSYIHLRNFSIDGKVGAGNAIEDFRDILVWV-------------------QGQEIKSGPKGVVLRSMILQNAGGECVRLKYFVTQAEIFGNLIRNCGVYDFQFAAGGKNGEGI 232
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Match: A0A1F7I8U6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_12 TaxID=1802056 RepID=A0A1F7I8U6_9BACT) HSP 1 Score: 120 bits (301), Expect = 7.410e-30 Identity = 68/177 (38.42%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 1 QDTLDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAIIRGARSSHVFNVHHDHYVLEHFTIDGQCGDGSVREHYRNKLIYVCGTHRVPRLIEGKHLTQRQSGQAYLSSVDGLVVRHMTLANCGGECVRLKCFVTHTNFHHNTVTNCGVYDTRFQAGALNGEAV 531 Q +D QPGDTI L G YFQD+VT+ G + PITI G + A+++G + +F ++HD L FTIDGQ G+ + YR+KLIY G E K +T GL + M++ N GGEC+RL+ F +NT+ CGV D F G NGE V Sbjct: 2 QKAVDRAQPGDTINLLPGVYFQDVVTKRSGTPENPITISG------TKDAVVKGGGKARIFEINHDFISLSGFTIDGQYGELDNKNGYRDKLIYALGKE------ERKGVT-------------GLKIMSMSIKNAGGECIRLRYFAQRNEIAYNTIIRCGVSDFSFSGGGKNGEGV 153
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Match: A0A0G0AZ49_9BACT (Secreted protein n=1 Tax=Parcubacteria group bacterium GW2011_GWC2_32_10 TaxID=1618918 RepID=A0A0G0AZ49_9BACT) HSP 1 Score: 123 bits (309), Expect = 1.450e-29 Identity = 67/177 (37.85%), Postives = 96/177 (54.24%), Query Frame = 1 Query: 1 QDTLDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAIIRGARSSHVFNVHHDHYVLEHFTIDGQCGDGSVREHYRNKLIYVCGTHRVPRLIEGKHLTQRQSGQAYLSSVDGLVVRHMTLANCGGECVRLKCFVTHTNFHHNTVTNCGVYDTRFQAGALNGEAV 531 Q +++ QPG TI L G+YFQD+V+ +G +PI+I G + AII+GA +S V ++HD+ ++ FT+DG GD S YR+ LIY G E K+ V GL + M + N GGEC+RLK F + +N + NCG+YD +F AG NGE + Sbjct: 71 QKAVNLAQPGQTIYLLPGQYFQDIVSARNGSLQSPISILGRQD------AIIKGAGASRVIEINHDNIIISGFTLDGLYGDASKASGYRDMLIYAVGK-------ESKN------------GVTGLKITDMNIKNSGGECIRLKYFAQNNEIANNVIQNCGIYDFKFSAGGKNGEGI 222
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Match: D7FIS4_ECTSI (Putative nosD copper-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS4_ECTSI) HSP 1 Score: 121 bits (303), Expect = 6.040e-29 Identity = 67/153 (43.79%), Postives = 90/153 (58.82%), Query Frame = 1 Query: 1 QDTLDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAIIRG-ARSSHVFNVHHDHYVLEHFTIDGQCGDG--------SVREHYRNKLIYVCGTHRVPRLIEGKHLTQRQSGQAYLSSVDGLVVRHMTLANCGGECVRLK 432 +D LD V PGD I L G+Y++DL TRTDG AD PITIRG G ++RG SS V + HD+Y++E FT+DG D S + +R+ LIY I + T+R G Y+S++DGLV+R+M LAN GGEC+RL+ Sbjct: 17 KDALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEDFTVDGDAEDDPNRNSDSDSAEDMWRDILIYA---------IADREPTERDGG--YVSTLDGLVIRNMKLANAGGECIRLR 158
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI) HSP 1 Score: 119 bits (297), Expect = 9.710e-29 Identity = 66/181 (36.46%), Postives = 106/181 (58.56%), Query Frame = 1 Query: 1 QDTLDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAIIRGARS----SHVFNVHHDHYVLEHFTIDGQCGDGSVREHYRNKLIYVCGTHRVPRLIEGKHLTQRQSGQAYLSSVDGLVVRHMTLANCGGECVRLKCFVTHTNFHHNTVTNCGVYDTRFQAGALNGEAV 531 Q LD +PGDT+ L+ GEY++ VT+T G DA ITI G ++ AI++G + + + H +Y L+ FTIDG+ + +Y +K +YV + R + K + +G + SS++GLV+ +M + NCGGECVR++ FVT++ ++N +TNCG +D G+ NGE + Sbjct: 40 QSALDKAKPGDTLRLAPGEYWETAVTKTAGREDAYITIEG-----ETYGAIVKGDQDIDNDGYALKIEHSYYRLDRFTIDGK----HSKNNYIDKCLYV----QQNRDNDDKAKKIKFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDFVMDGGSKNGEGI 207
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Match: A0A261GV77_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GV77_9GAMM) HSP 1 Score: 115 bits (289), Expect = 1.280e-27 Identity = 69/174 (39.66%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 10 LDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAIIRGARSSHVFNVHHDHYVLEHFTIDGQCGDGSVREHYRNKLIYVCGTHRVPRLIEGKHLTQRQSGQAYLSSVDGLVVRHMTLANCGGECVRLKCFVTHTNFHHNTVTNCGVYDTRFQAGALNGEAV 531 L++ QPG+ I L G Y+QD+ T DG AD PI I G S A + GA +H+ +HH + L FTIDG+ D + E YR LI+V G IE +S G+ +R M L N GGECVR++ FV+ NT NCGV D +F G NGEA+ Sbjct: 64 LELAQPGERIFLHDGHYYQDVRTVRDGEADRPILIYG------SKEAELHGAFDAHIIEIHHSYIHLRGFTIDGKYADEASPESYRGTLIWVQG-------IEP------------MSGPKGVAIRAMRLRNAGGECVRIRYFVSEAEIFGNTFYNCGVLDFQFNDGTKNGEAI 212
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE) HSP 1 Score: 115 bits (289), Expect = 1.140e-26 Identity = 65/181 (35.91%), Postives = 104/181 (57.46%), Query Frame = 1 Query: 1 QDTLDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAIIRGARS----SHVFNVHHDHYVLEHFTIDGQCGDGSVREHYRNKLIYVCGTHRVPRLIEGKHLTQRQSGQAYLSSVDGLVVRHMTLANCGGECVRLKCFVTHTNFHHNTVTNCGVYDTRFQAGALNGEAV 531 Q LD +PGDT+ L+ GEY++ VT+T G DA ITI G ++ AI++G + + + H +Y L+ FTIDG+ + +Y +K +YV + R + K +G + SS++GLV+ +M + NCGGECVR++ FVT++ ++N +TNCG +D + NGE + Sbjct: 344 QSALDKAKPGDTLRLAPGEYWETAVTKTAGREDAYITIEG-----ETYGAIVKGDQGIDNDGYALKIEHSYYRLDRFTIDGK----HSKNNYIDKCLYV----QQNRDNDDKAKKINFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDYVMNGSSKNGEGI 511 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1017.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1017.1.2 >prot_D-mesarthrocarpus_Contig1017.1.2 ID=prot_D-mesarthrocarpus_Contig1017.1.2|Name=mRNA_D-mesarthrocarpus_Contig1017.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=182bp QDTLDIVQPGDTITLSGGEYFQDLVTRTDGLADAPITIRGLEGEAKSNPAback to top mRNA from alignment at D-mesarthrocarpus_Contig1017:214..1434- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1017.1.2 ID=mRNA_D-mesarthrocarpus_Contig1017.1.2|Name=mRNA_D-mesarthrocarpus_Contig1017.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1221bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1017:214..1434- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1017:214..1434- >mRNA_D-mesarthrocarpus_Contig1017.1.2 ID=mRNA_D-mesarthrocarpus_Contig1017.1.2|Name=mRNA_D-mesarthrocarpus_Contig1017.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=546bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1017:214..1434- (Discosporangium mesarthrocarpum MT17_79)back to top |