mRNA_D-mesarthrocarpus_Contig1016.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Match: A0A835Z9Q2_9STRA (Arginine biosynthesis bifunctional protein ArgJ, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q2_9STRA) HSP 1 Score: 338 bits (868), Expect = 7.870e-109 Identity = 171/250 (68.40%), Postives = 200/250 (80.00%), Query Frame = 2 Query: 308 GARLVGIAKGAGMIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTVVLVSSGRVEAAESDLLDFEARLGALCSGLAEDVVRNGEGVGHVIKVQVTGAPTEALARRLGKAIVNSPLFKTAISGNDPNVGRLLAVVGRVMATESPEADMSKTRLSFGGSVVFENNAFCIGPKKEEELCDLFKGAQITDGGNHLPYPPHFRVVPVEVDLGIGKASATVVGSDLSSEYVRINADYRS 1057 GA +VGIAKGAGMIEP+MATMLVYILTDL VPR L+++L KVD+SFNCISVDSDTSTSDTVVLVSSG+V A E DL F A L ++C GLA+DVVRNGEG HV++V V GAP++A ARR+GK +VNSPLFK A++GNDPNVGRLLAVVGRVM P AD+S+TRLSFGG VVFEN FCI P E+E+ FK A+I G H+ YPPH R V +EVD+G+G TV GSDL++EYVRINADYRS Sbjct: 243 GASVVGIAKGAGMIEPNMATMLVYILTDLDVPRSALQSLLRAKVDASFNCISVDSDTSTSDTVVLVSSGKVAAREGDLEAFGAALESVCKGLAQDVVRNGEGTTHVMEVLVKGAPSDATARRVGKEVVNSPLFKCAVAGNDPNVGRLLAVVGRVMGVLDPAADLSRTRLSFGGKVVFENGQFCIDPALEDEIYAQFKSAEILVNGEHVAYPPHMRTVQIEVDMGLGDHEVTVYGSDLTAEYVRINADYRS 492
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Match: UPI0019BA619A (Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=UPI0019BA619A) HSP 1 Score: 280 bits (717), Expect = 4.440e-88 Identity = 155/265 (58.49%), Postives = 187/265 (70.57%), Query Frame = 2 Query: 287 VHTLTLGGARLVGIAKGAGMIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTVVLVSSGRVEAAESDLLDFEARLGALCSGLAEDVVRNGEGVGHVIKVQVTGAPTEALARRLGKAIVNSPLFKTAISGNDPNVGRLLAVVGRVMATESPEADMSKTRLSFGGSVVFENNAFCIGPKKEEELCDLFKGAQI------TDGGNHLP--YPPHFRVVPVEVDLGIGKASATVVGSDLSSEYVRINADYRS 1057 V + +G R+VGIAKGAGMIEP+MATMLVYILTDL VPRD LRA+L + V++SFN IS+DSDTSTSDTV LVSSG V DL FE+ L +C LAEDVVRNGEGV HVI+V+VT A T +LA LGKAIVN+PLFK A++GNDPNVGRL+ +G+ + +PE D+SK R S GG +F + AF + P+KE L KGA++ DG P YPPH R V + VDLG G + ATV G DL+ EYV NADYRS Sbjct: 85 VRSAAVGAGRIVGIAKGAGMIEPNMATMLVYILTDLAVPRDTLRALLTKTVNASFNRISIDSDTSTSDTVALVSSGLVPC--DDLAAFESALALVCRDLAEDVVRNGEGVRHVIRVEVTNAATPSLAVALGKAIVNAPLFKCAVAGNDPNVGRLVQAIGKHVGAHAPETDLSKLRASIGGIEIFADGAFRLNPEKELALVGHLKGAELYTSKPSADGVFAPPVDYPPHERCVEIVVDLGSGHSRATVFGGDLTHEYVSENADYRS 347
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Match: D7G2H9_ECTSI (Arginine biosynthesis bifunctional protein ArgJ, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H9_ECTSI) HSP 1 Score: 280 bits (716), Expect = 2.680e-86 Identity = 140/197 (71.07%), Postives = 165/197 (83.76%), Query Frame = 2 Query: 308 GARLVGIAKGAGMIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTVVLVSSGRVEAAESDLLDFEARLGALCSGLAEDVVRNGEGVGHVIKVQVTGAPTEALARRLGKAIVNSPLFKTAISGNDPNVGRLLAVVGRVMATESPEADMSKTRLSFGGSVVFENNAFCIGPKKEEELCDLFK 898 G RLVGIAKGAGMIEPDMATMLVY++TDLQ+PR+++R +L +K D+SFNCIS+DSDTSTSDTV+L+SSG+V AE DL DFE +L A+C GLAEDVVRNGEG HV++ VTGAPT ALAR+LGK +VNSPLFK A GNDPNVGRLLAVVGRVM +SP+ D+S TR+S GG VVFE+N F I P+ E EL DLFK Sbjct: 256 GGRLVGIAKGAGMIEPDMATMLVYLVTDLQIPREKMRELLSKKSDASFNCISIDSDTSTSDTVLLLSSGKVPLAEGDLEDFEEKLEAVCDGLAEDVVRNGEGTAHVMQGHVTGAPTSALARKLGKGVVNSPLFKGAGGGNDPNVGRLLAVVGRVMGKKSPDTDVSNTRISLGGHVVFEDNTFAISPEMETELFDLFK 452
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Match: A0A556QS18_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Rariglobus hedericola TaxID=2597822 RepID=A0A556QS18_9BACT) HSP 1 Score: 276 bits (707), Expect = 2.190e-85 Identity = 152/265 (57.36%), Postives = 184/265 (69.43%), Query Frame = 2 Query: 287 VHTLTLGGARLVGIAKGAGMIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTVVLVSSGRVEAAESDLLDFEARLGALCSGLAEDVVRNGEGVGHVIKVQVTGAPTEALARRLGKAIVNSPLFKTAISGNDPNVGRLLAVVGRVMATESPEADMSKTRLSFGGSVVFENNAFCIGPKKEEELCDLFKGAQI------TDG--GNHLPYPPHFRVVPVEVDLGIGKASATVVGSDLSSEYVRINADYRS 1057 V + +G R+VGIAKGAGMIEP+MATMLVYILTDL VPRD LRA+L + V++SFN IS+DSDTSTSDTV LVSS V DL FE L +C LAEDVVRNGEGV HVI+V+V A T +LA LGKAIVN+PLFK A++GNDPNVGRL+ +G+ + +PE D+SK R S GG +F AF + P+KE L K A++ DG + YPPH R V +EVDLG G A+AT+ G DL+ EYV NADYRS Sbjct: 176 VRSAAVGAGRIVGIAKGAGMIEPNMATMLVYILTDLAVPRDTLRALLTKTVNASFNRISIDSDTSTSDTVALVSSSLVPC--DDLAAFENALALVCRDLAEDVVRNGEGVRHVIRVEVKNAATASLACALGKAIVNAPLFKCAVAGNDPNVGRLVQAIGKHVGAHAPETDLSKLRASIGGIEIFAKGAFRLNPEKETALVAHLKNAELYTSKPSADGVFAATVDYPPHERCVEIEVDLGSGHAAATIFGGDLTHEYVSENADYRS 438
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Match: A0A4Q5X871_9DELT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A4Q5X871_9DELT) HSP 1 Score: 276 bits (705), Expect = 4.480e-85 Identity = 148/265 (55.85%), Postives = 185/265 (69.81%), Query Frame = 2 Query: 287 VHTLTLGGARLVGIAKGAGMIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTVVLVSSGRVEAAESDLLDFEARLGALCSGLAEDVVRNGEGVGHVIKVQVTGAPTEALARRLGKAIVNSPLFKTAISGNDPNVGRLLAVVGRVMATESPEADMSKTRLSFGGSVVFENNAFCIGPKKEEELCDLFKGAQI------TDGGNHLP--YPPHFRVVPVEVDLGIGKASATVVGSDLSSEYVRINADYRS 1057 V + + G R+VGIAKGAGMIEP++ATMLVY+ TDL VPR LR ML V +FN +S+DSDTSTSDTVVLVSS +V A DL FEA L +C L ED+VRNGEGV HV++V+VTGAPTEALAR +GKA+VN+PLFK A++GNDPNVGRL+ VG+ + +PE ++S T + GG + F + P KE EL K A++ DG P +PPH R V V++DLGIG ASA V+G+DL+ EYV NADYRS Sbjct: 177 VRSAEVQGGRIVGIAKGAGMIEPNLATMLVYVFTDLAVPRAALREMLPRVVGPTFNAMSIDSDTSTSDTVVLVSSSKVPCA--DLAGFEAALLGVCRDLTEDIVRNGEGVRHVLRVEVTGAPTEALARGIGKAVVNAPLFKCAVAGNDPNVGRLVQAVGKYVGAAAPEVNLSNTSMRLGGIPIVNRAEFFLEPSKEAELVQHLKSAELYESRPAADGTFSPPVDFPPHERAVQVQIDLGIGNASAVVLGADLTHEYVSENADYRS 439
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Match: A0A2E4J481_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=A0A2E4J481_9BACT) HSP 1 Score: 275 bits (704), Expect = 6.150e-85 Identity = 148/265 (55.85%), Postives = 184/265 (69.43%), Query Frame = 2 Query: 287 VHTLTLGGARLVGIAKGAGMIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTVVLVSSGRVEAAESDLLDFEARLGALCSGLAEDVVRNGEGVGHVIKVQVTGAPTEALARRLGKAIVNSPLFKTAISGNDPNVGRLLAVVGRVMATESPEADMSKTRLSFGGSVVFENNAFCIGPKKEEELCDLFKGAQI-----TDGGNHLP---YPPHFRVVPVEVDLGIGKASATVVGSDLSSEYVRINADYRS 1057 V + +GG +VGIAKGAGMIEP++ATMLVYILTDL VPRD LRAML V+ SFN IS+DSDTSTSDTV ++SSG+V DL F+ L +C LAEDVVRNGEGV HVI+V V AP A+AR LGKAIVN+PLFK A++GND NVGRL+ V+G+ + + D+S +L GG +F F + P+KEE+L D + A++ T G P YP H R V +E+DLG+G ASATV+G DL+ EYV NADYRS Sbjct: 176 VRRVQIGGGSIVGIAKGAGMIEPNLATMLVYILTDLDVPRDDLRAMLARAVEPSFNSISIDSDTSTSDTVAVLSSGKVPC--DDLAAFQVGLANVCGDLAEDVVRNGEGVRHVIRVTVNHAPDTAIARSLGKAIVNAPLFKCAVAGNDANVGRLVQVIGKHIGESATPIDLSSLKLKLGGIAIFAQGVFQLNPEKEEDLTDHLRSAELYQSTPTAEGVFTPPVEYPTHERCVEIEIDLGLGDASATVIGGDLTHEYVTENADYRS 438
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Match: A0A2T6CMV1_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Opitutus sp. ER46 TaxID=2161864 RepID=A0A2T6CMV1_9BACT) HSP 1 Score: 272 bits (695), Expect = 1.360e-83 Identity = 148/265 (55.85%), Postives = 183/265 (69.06%), Query Frame = 2 Query: 287 VHTLTLGGARLVGIAKGAGMIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTVVLVSSGRVEAAESDLLDFEARLGALCSGLAEDVVRNGEGVGHVIKVQVTGAPTEALARRLGKAIVNSPLFKTAISGNDPNVGRLLAVVGRVMATESPEADMSKTRLSFGGSVVFENNAFCIGPKKEEELCDLFKGAQI------TDGGNHLP--YPPHFRVVPVEVDLGIGKASATVVGSDLSSEYVRINADYRS 1057 V T+G +VGIAKGAGMIEP++ATMLVY+LTDL VPR LRA+L V +SFN IS+DSDTSTSDTVV +SSGRV DL FEA L +C LAEDVVRNGEGV HV++V V A T LAR LGKAIVN+PLFK A++GNDPNVGRL+ +G+ + +P+ D+SK R S GG V+F F + P+KE L F+ A++ DG P +PPH R V +++DLG G +ATV+G DL+ EYV NADYRS Sbjct: 176 VRRATVGSGSIVGIAKGAGMIEPNLATMLVYLLTDLVVPRAELRAILSRVVGTSFNTISIDSDTSTSDTVVALSSGRVPCP--DLAAFEAALRQVCQDLAEDVVRNGEGVRHVVRVAVRNAATPELARALGKAIVNAPLFKCAVAGNDPNVGRLVQAMGKFVGAHAPDTDLSKLRASIGGIVIFARGVFQLNPEKEVALVAHFRAAELYASAPPQDGVFAPPIHFPPHERCVEIDLDLGTGSGAATVIGGDLTHEYVSENADYRS 438
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Match: A0A3E1EPG1_9BACT (Arginine biosynthesis bifunctional protein ArgJ n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1EPG1_9BACT) HSP 1 Score: 271 bits (692), Expect = 3.810e-83 Identity = 148/265 (55.85%), Postives = 182/265 (68.68%), Query Frame = 2 Query: 287 VHTLTLGGARLVGIAKGAGMIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTVVLVSSGRVEAAESDLLDFEARLGALCSGLAEDVVRNGEGVGHVIKVQVTGAPTEALARRLGKAIVNSPLFKTAISGNDPNVGRLLAVVGRVMATESPEADMSKTRLSFGGSVVFENNAFCIGPKKEEELCDLFKGAQI------TDGGNHLP--YPPHFRVVPVEVDLGIGKASATVVGSDLSSEYVRINADYRS 1057 + T+GG +VGIAKGAGMIEP+MATMLVY+LTD+ +PR LRAML V++SFN ISVDSDTSTSDTV L+SSG+V D FE L +C LAEDVVRNGEGV HVI+V V A T LAR LGKAIVN+PLFK A++GNDPNVGRL+ +G+ + +P+ D+SK +L+ GG +F F + P KE+ L KGA++ DG P YPPH R V + VDLG G A+A V+G DL+ EYV NADYRS Sbjct: 176 IRRATVGGGSIVGIAKGAGMIEPNMATMLVYVLTDIAIPRATLRAMLTRVVNTSFNTISVDSDTSTSDTVALLSSGQVSGV--DHTAFEQALTTVCRDLAEDVVRNGEGVRHVIRVSVQRAATAELARDLGKAIVNAPLFKCAVAGNDPNVGRLVQAIGKHVGAHAPDTDLSKLKLTLGGIEIFSGGVFQLNPDKEKALVAHLKGAELYASAPPKDGVFTAPIDYPPHERCVEINVDLGGGTAAAIVLGGDLTHEYVSENADYRS 438
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Match: UPI0001964D47 (bifunctional ornithine acetyltransferase/N-acetylglutamate synthase n=1 Tax=Geminisphaera colitermitum TaxID=1148786 RepID=UPI0001964D47) HSP 1 Score: 271 bits (694), Expect = 5.130e-83 Identity = 153/271 (56.46%), Postives = 184/271 (67.90%), Query Frame = 2 Query: 305 GGARLVGIAKGAGMIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTVVLVSSGRVEAAESD------------LLDFEARLGALCSGLAEDVVRNGEGVGHVIKVQVTGAPTEALARRLGKAIVNSPLFKTAISGNDPNVGRLLAVVGRVMATESPEADMSKTRLSFGGSVVFENNAFCIGPKKEEELCDLFKGAQITDG-----GNHLP---YPPHFRVVPVEVDLGIGKASATVVGSDLSSEYVRINADYRS 1057 G R+VGIAKGAGMIEP+MATMLVYILTD+ VPRD LRAML V+ SFN +SVDSDTSTSDTVVLVSSG V ++ L FEA L +C LAEDVVRNGEGV HVI+V++ A TE+LA LGKAIVN+PLFK A++GNDPNVGRL+ +G+ + +P D+S R S GG +F N AF + P+KE L K A++ + G P YPPH R V ++VDLG G ASATV G+DL+ EYV NADYRS Sbjct: 203 GAGRIVGIAKGAGMIEPNMATMLVYILTDIAVPRDELRAMLQRAVNVSFNRMSVDSDTSTSDTVVLVSSGVVTLDQAXXXXXXXXXXAVALAGFEAALTQVCRDLAEDVVRNGEGVRHVIRVRIQNAATESLACALGKAIVNAPLFKCAVAGNDPNVGRLVQAIGKHVGAHAPGTDLSALRASIGGIEIFANGAFLLDPQKELALVAHLKAAELYESRPAADGTFAPPVDYPPHERCVEIDVDLGNGTASATVFGADLTHEYVSENADYRS 473
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Match: A0A7S0LID0_9EUKA (Arginine biosynthesis bifunctional protein ArgJ, mitochondrial n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LID0_9EUKA) HSP 1 Score: 268 bits (686), Expect = 8.340e-83 Identity = 142/255 (55.69%), Postives = 177/255 (69.41%), Query Frame = 2 Query: 308 GARLVGIAKGAGMIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTVVLVSSG----RVEAAESDLLDFEARLGALCSGLAEDVVRNGEGVGHVIKVQVTGAPTEALARRLGKAIVNSPLFKTAISGNDPNVGRLLAVVGRVMATESPEADMSKTRLSFGGSVVFENNAFCIGPKKEEELCDLFKGAQIT-DGGNHLPYPPHFRVVPVEVDLGIGKASATVVGSDLSSEYVRINADYRS 1057 G RLVGIAKGAGMIEP+MATML +ILTDL VPR L+ ML DSSFNC+SVD+D STSDT+V +SS + + L +FE L LC L+ DV RNGEG HVI+V+V+G+PT +AR +GKA+VNSPLFKTA++GNDPNVGRL+ VG + +PE ++ + GG +F+ +F + + E EL K A IT +GG LPYPPH R V VEV+LG G + TVVGSDL+ EYV INADYRS Sbjct: 140 GGRLVGIAKGAGMIEPNMATMLSFILTDLDVPRSELQRMLAAAADSSFNCMSVDADQSTSDTLVCISSATTPLKASRDQEALAEFEGALRQLCEELSGDVARNGEGTSHVIRVRVSGSPTREIARGVGKAVVNSPLFKTAVAGNDPNVGRLVGAVGSYLGRAAPELELGGVSMRLGGRTIFKQGSFDLDSEAEAELSAHLKQALITGEGGVSLPYPPHERCVEVEVELGNGDEAITVVGSDLTREYVDINADYRS 394 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1016.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1016.3.1 >prot_D-mesarthrocarpus_Contig1016.3.1 ID=prot_D-mesarthrocarpus_Contig1016.3.1|Name=mRNA_D-mesarthrocarpus_Contig1016.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=239bp MIEPDMATMLVYILTDLQVPRDRLRAMLWEKVDSSFNCISVDSDTSTSDTback to top mRNA from alignment at D-mesarthrocarpus_Contig1016:6589..11621- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1016.3.1 ID=mRNA_D-mesarthrocarpus_Contig1016.3.1|Name=mRNA_D-mesarthrocarpus_Contig1016.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=5033bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1016:6589..11621- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1016:6589..11621- >mRNA_D-mesarthrocarpus_Contig1016.3.1 ID=mRNA_D-mesarthrocarpus_Contig1016.3.1|Name=mRNA_D-mesarthrocarpus_Contig1016.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=717bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1016:6589..11621- (Discosporangium mesarthrocarpum MT17_79)back to top |