mRNA_D-mesarthrocarpus_Contig10157.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Match: A0A6H5KCM5_9PHAE (HSP100 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCM5_9PHAE) HSP 1 Score: 288 bits (737), Expect = 1.070e-93 Identity = 144/181 (79.56%), Postives = 163/181 (90.06%), Query Frame = 1 Query: 4 IRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHSDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGSQSIVEV--AGDPAQREEMRNRVMSAMREGFRPEFLNRIDEFVIFESLTLGDMRKITALELKKVSTRLTDRDMTLQTTDAALDFLAEIG 540 +RIDMSEYMEKFAVSRL+GAPPGYVGYEEGGQLTDA+RQRPYSV+LFDEMEKAH DVFNIMLQLLDDGRVTDSKGNVVNFCN I+IFTSNVGSQSI++V A REEMR+RVM+AMREGFRPEFLNRIDEFVIF+ L+ DMR I+ LELKKV+ RL DRD+TL+ +D+ALDFL+ +G Sbjct: 192 VRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNCIIIFTSNVGSQSILDVSSAEGGGAREEMRSRVMAAMREGFRPEFLNRIDEFVIFDRLSAEDMRHISRLELKKVTLRLADRDITLEASDSALDFLSTVG 372
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Match: G3G4V7_9PHAE (Casein lytic proteinase (Fragment) n=25 Tax=Fucaceae TaxID=3010 RepID=G3G4V7_9PHAE) HSP 1 Score: 269 bits (688), Expect = 4.480e-90 Identity = 133/165 (80.61%), Postives = 151/165 (91.52%), Query Frame = 1 Query: 4 IRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHSDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGSQSIVEVAG--DPAQREEMRNRVMSAMREGFRPEFLNRIDEFVIFESLTLGDMRKITALELKKVSTRLTDRDM 492 +RIDMSEYMEKF+VSRL+GAPPGYVGYEEGGQLTDA+RQRPYSV+LFDEMEKAH DVFNIMLQLLDDGRVTDSKGNVVNFCN IVIFTSNVG QSI++V+ D REEMR+RVM+AMREGFRPEFLNRIDEFVIF+ L++ DMR+IT+LEL+KV+ RL D+ M Sbjct: 5 VRIDMSEYMEKFSVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNCIVIFTSNVGGQSILDVSSSQDSGAREEMRSRVMAAMREGFRPEFLNRIDEFVIFDRLSMEDMREITSLELRKVTARLADKGM 169
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Match: D7FMK6_ECTSI (ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK6_ECTSI) HSP 1 Score: 290 bits (743), Expect = 4.750e-90 Identity = 145/181 (80.11%), Postives = 163/181 (90.06%), Query Frame = 1 Query: 4 IRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHSDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGSQSIVEV--AGDPAQREEMRNRVMSAMREGFRPEFLNRIDEFVIFESLTLGDMRKITALELKKVSTRLTDRDMTLQTTDAALDFLAEIG 540 +RIDMSEYMEKFAVSRL+GAPPGYVGYEEGGQLTDA+RQRPYSV+LFDEMEKAH DVFNIMLQLLDDGRVTDSKGNVVNFCN I+IFTSNVGSQSI++V A REEMRNRVM+AMREGFRPEFLNRIDEFVIF+ L+ DMR I+ LELKKV+ RL DRD+TL+ +D+ALDFL+ +G Sbjct: 647 VRIDMSEYMEKFAVSRLVGAPPGYVGYEEGGQLTDAIRQRPYSVVLFDEMEKAHPDVFNIMLQLLDDGRVTDSKGNVVNFCNCIIIFTSNVGSQSILDVSSAEGGGVREEMRNRVMAAMREGFRPEFLNRIDEFVIFDRLSAEDMRHISGLELKKVTLRLADRDITLEASDSALDFLSSVG 827
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Match: A0A835Z9T5_9STRA (ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9T5_9STRA) HSP 1 Score: 288 bits (737), Expect = 2.470e-89 Identity = 140/179 (78.21%), Postives = 162/179 (90.50%), Query Frame = 1 Query: 4 IRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHSDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGSQSIVEVAGDPAQREEMRNRVMSAMREGFRPEFLNRIDEFVIFESLTLGDMRKITALELKKVSTRLTDRDMTLQTTDAALDFLAEIG 540 +RIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVR+RPYSVILFDEMEKAH DVFN+MLQ+LDDGRVTDSKGNVVNFCN ++IFTSNVGS+ I+++AG+P++ EEMR+RVM+AMR+ FRPEFLNR+DEFVIF +L MR ITALELKKV RL D+ +TLQ T+ ALDFLAE+G Sbjct: 627 VRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRRRPYSVILFDEMEKAHGDVFNVMLQILDDGRVTDSKGNVVNFCNCVIIFTSNVGSRDILDLAGEPSRNEEMRSRVMAAMRQDFRPEFLNRLDEFVIFSALGKPQMRGITALELKKVQKRLADKRITLQATEEALDFLAEVG 805
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Match: H6WB90_VAULI (ATPase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB90_VAULI) HSP 1 Score: 274 bits (701), Expect = 3.430e-84 Identity = 129/179 (72.07%), Postives = 161/179 (89.94%), Query Frame = 1 Query: 4 IRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHSDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGSQSIVEVAGDPAQREEMRNRVMSAMREGFRPEFLNRIDEFVIFESLTLGDMRKITALELKKVSTRLTDRDMTLQTTDAALDFLAEIG 540 +RIDMSEYMEKF+VSRLIGAPPGYVGY+EGGQLTD +R+RPY+VILFDEMEKAH+DVFNIMLQ+LDDGRVTD+KGNVVNFCNS++IFTSNVGS I+++AGDP++ EM+ +VM+AMR+GF+PEFLNR+DEFVIF SL +MR IT+LEL+KV RL ++++ L+ T ALDF+AE+G Sbjct: 622 VRIDMSEYMEKFSVSRLIGAPPGYVGYDEGGQLTDIIRRRPYAVILFDEMEKAHNDVFNIMLQILDDGRVTDNKGNVVNFCNSVIIFTSNVGSSDIIDMAGDPSRSLEMKAKVMAAMRKGFKPEFLNRLDEFVIFNSLGRSEMRGITSLELRKVENRLKEKNLFLKATGEALDFIAEVG 800
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Match: A0A7S2UWD5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWD5_9STRA) HSP 1 Score: 256 bits (655), Expect = 9.000e-84 Identity = 121/179 (67.60%), Postives = 152/179 (84.92%), Query Frame = 1 Query: 4 IRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHSDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGSQSIVEVAGDPAQREEMRNRVMSAMREGFRPEFLNRIDEFVIFESLTLGDMRKITALELKKVSTRLTDRDMTLQTTDAALDFLAEIG 540 +R+DMSEYMEK V+RLIGAPPGY+GY+EGGQLT+AVR+RPYSVILFDEMEKAH DVFN++LQLLDDGRVTDS+G VNF N++VIFTSN+GS I+E AGDP++ +MR RVMSAM+ FRPEFLNR+DEFVIF++L+ MR I +LE++KV R++D + L +D ALDFLA++G Sbjct: 23 VRLDMSEYMEKHTVARLIGAPPGYIGYDEGGQLTEAVRRRPYSVILFDEMEKAHPDVFNVLLQLLDDGRVTDSQGTTVNFRNTVVIFTSNIGSMDILEYAGDPSKNAQMRERVMSAMKASFRPEFLNRVDEFVIFDALSKDQMRNIVSLEVEKVKRRVSDNKLELVVSDEALDFLADVG 201
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Match: A0A7S3Y487_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y487_HETAK) HSP 1 Score: 260 bits (664), Expect = 4.600e-81 Identity = 122/179 (68.16%), Postives = 153/179 (85.47%), Query Frame = 1 Query: 4 IRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHSDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGSQSIVEVAGDPAQREEMRNRVMSAMREGFRPEFLNRIDEFVIFESLTLGDMRKITALELKKVSTRLTDRDMTLQTTDAALDFLAEIG 540 +RIDMSEYMEK VSRL+GAPPGYVGY+EGGQLTDA+R RPY+V+LFDEMEKAH DVFN+MLQLLDDGR+TDSKGN VNF N+++IFTSN+GS I++V+GDP QREEMR RVM AM+ FRPEFLNR+DE+VIF+SL +R+I LEL+KV+ RL ++++ L+ + ALD +AE+G Sbjct: 350 VRIDMSEYMEKHTVSRLVGAPPGYVGYDEGGQLTDAIRTRPYAVVLFDEMEKAHPDVFNLMLQLLDDGRLTDSKGNTVNFRNTVIIFTSNIGSADILDVSGDPDQREEMRARVMGAMKAAFRPEFLNRVDEYVIFDSLRKDQLREIVRLELRKVTARLAEKEIQLKVAEDALDHVAEVG 528
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Match: A0A7S2W0C4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0C4_9STRA) HSP 1 Score: 253 bits (645), Expect = 6.920e-79 Identity = 125/179 (69.83%), Postives = 152/179 (84.92%), Query Frame = 1 Query: 4 IRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHSDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGSQSIVEVAGDPAQREEMRNRVMSAMREGFRPEFLNRIDEFVIFESLTLGDMRKITALELKKVSTRLTDRDMTLQTTDAALDFLAEIG 540 IRIDMSEYMEK +VSRLIGAPPGYVG+EEGGQLTDAVR+RPYSVILFDEMEKAH DVFNIMLQLLDDGR+TDSKGNVVNF N I++FTSN+GS ++EVAGD A++EE+R+ VMSA+RE FRPEF+NR+DEFVIF SL + +I LEL+++ R+ R MTL+ ++AA+ +A G Sbjct: 273 IRIDMSEYMEKHSVSRLIGAPPGYVGFEEGGQLTDAVRRRPYSVILFDEMEKAHGDVFNIMLQLLDDGRLTDSKGNVVNFRNCIIVFTSNIGSGKVLEVAGDLARQEEVRDVVMSAVRESFRPEFINRVDEFVIFNSLGPDQLSQIVRLELRRLEERVAGRAMTLEVSEAAVAHIANTG 451
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Match: A0A6J4K701_9CYAN (ClpB protein n=1 Tax=uncultured Coleofasciculus sp. TaxID=1267456 RepID=A0A6J4K701_9CYAN) HSP 1 Score: 246 bits (627), Expect = 9.780e-79 Identity = 115/179 (64.25%), Postives = 151/179 (84.36%), Query Frame = 1 Query: 4 IRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHSDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGSQSIVEVAGDPAQREEMRNRVMSAMREGFRPEFLNRIDEFVIFESLTLGDMRKITALELKKVSTRLTDRDMTLQTTDAALDFLAEIG 540 +RIDMSEYMEK +VSRL+GAPPGY+GYEEGGQLT+++R+RPY+VILFDE+EKAH DVFN+MLQ+LDDGRVTDS+G+ V+F NS++I TSN+GSQ I++VAGD + +EM +RVM AMR FRPEFLNRIDE +IF +L +R I L+ K++ RL +R M+L+ +++ALDFLAE+G Sbjct: 75 VRIDMSEYMEKHSVSRLLGAPPGYIGYEEGGQLTESIRRRPYAVILFDEIEKAHPDVFNVMLQILDDGRVTDSQGHTVDFKNSVIIMTSNIGSQYILDVAGDDSHYDEMHSRVMEAMRSSFRPEFLNRIDEVIIFHALKKSQLRHIVYLQTKRLEQRLAERKMSLKLSESALDFLAEVG 253
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Match: A0A7S2EHK9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EHK9_9STRA) HSP 1 Score: 249 bits (635), Expect = 7.110e-78 Identity = 123/180 (68.33%), Postives = 151/180 (83.89%), Query Frame = 1 Query: 4 IRIDMSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHSDVFNIMLQLLDDGRVTDSKGNVVNFCNSIVIFTSNVGSQSIVEVAG-DPAQREEMRNRVMSAMREGFRPEFLNRIDEFVIFESLTLGDMRKITALELKKVSTRLTDRDMTLQTTDAALDFLAEIG 540 IR+DMSEYMEK VSRL+GAPPGYVGY+EGGQLTDAVR++PYSVILFDEMEKAH DVFN+MLQLLDDGRVTDSKGNVVNF N ++IFTSN+GSQ I+++ G DP + M+ RV +AMR+ F+PEFLNRIDE VIF SL+ ++R I +E K++ RL DRDM+L ++AALD LA++G Sbjct: 221 IRLDMSEYMEKHTVSRLLGAPPGYVGYDEGGQLTDAVRRKPYSVILFDEMEKAHPDVFNVMLQLLDDGRVTDSKGNVVNFRNCVIIFTSNIGSQDIIDLGGSDPESQALMKERVGNAMRDHFKPEFLNRIDENVIFNSLSKTNLRGIVKIESKRLEKRLRDRDMSLSMSEAALDHLADVG 400 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10157.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10157.1.1 >prot_D-mesarthrocarpus_Contig10157.1.1 ID=prot_D-mesarthrocarpus_Contig10157.1.1|Name=mRNA_D-mesarthrocarpus_Contig10157.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=176bp MSEYMEKFAVSRLIGAPPGYVGYEEGGQLTDAVRQRPYSVILFDEMEKAHback to top mRNA from alignment at D-mesarthrocarpus_Contig10157:153..1167+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10157.1.1 ID=mRNA_D-mesarthrocarpus_Contig10157.1.1|Name=mRNA_D-mesarthrocarpus_Contig10157.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1015bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10157:153..1167+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10157:153..1167+ >mRNA_D-mesarthrocarpus_Contig10157.1.1 ID=mRNA_D-mesarthrocarpus_Contig10157.1.1|Name=mRNA_D-mesarthrocarpus_Contig10157.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=528bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10157:153..1167+ (Discosporangium mesarthrocarpum MT17_79)back to top |