mRNA_D-mesarthrocarpus_Contig1015.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Match: A0A7S0ZVA1_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZVA1_NOCSC) HSP 1 Score: 62.0 bits (149), Expect = 6.570e-8 Identity = 51/131 (38.93%), Postives = 62/131 (47.33%), Query Frame = 2 Query: 833 DSSDLPLHVACQLGHREVCVALLKFIVSCYGHSKCLTIVNAKDRFGRSPLHLASWTPHRHFRKKGHIS-VRDLLAHGADVKGRDKRG----LTPLHWACRAADTVTTKVLLKEGADPLAEDEQCRTPLEAC 1210
D LPL A G E LL GHS V+ + G S LH+A+ +G I+ VR LLA ADV R +G +TPLHWA +LL+ GADPLA DE +TPLE C
Sbjct: 18 DRDTLPLIWAAGEGASEQVQELLDA-----GHS-----VSERTADGESTLHVAAI--------QGDIATVRALLAARADVNARTNKGKMLSMTPLHWAIYHGHKQMVLLLLQSGADPLAADENGKTPLEMC 130
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Match: A0A0G4GFP0_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GFP0_VITBC) HSP 1 Score: 60.8 bits (146), Expect = 1.040e-6 Identity = 43/120 (35.83%), Postives = 63/120 (52.50%), Query Frame = 2 Query: 848 PLHVACQLGHREVCVALLKFIVSCYGHSKCLTIVNAKDRFGRSPLHLASWTPHRHFRKKGHISVRDLLAHGADVKGRDKRGLTPLHWACRAADTVTTKVLLKEGADPLAEDEQCR-TPLE 1204
P H+ C +R V LL HSK ++++A D+ R+ L+ A + RH+ G + LLA GADV RD G TPLH+AC + +LL+ GADP ++ R +PL+
Sbjct: 159 PFHLGCYSENRNVVSILL--------HSKP-SLIHATDKHERTGLYYAVLS--RHW--SGQDITKLLLAKGADVNARDLYGRTPLHYACEDGQSKVVPLLLRNGADPHIQNTVSRKSPLQ 265
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Match: A0A2P5YN83_GOSBA (Uncharacterized protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5YN83_GOSBA) HSP 1 Score: 58.9 bits (141), Expect = 4.120e-6 Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 2 Query: 947 VNAKDRFGRSPLHLASWTPHRHFRKKGHISVRDLLAHGADVKGRD-KRGLTPLHWACRAADTVTTKVLLKEGADPLAEDEQCRTPLE 1204
VN ++RFG +PLH+A+W H ++ L+A GAD +D + G + LH A +LL+ GA ED +CRTP++
Sbjct: 58 VNCRNRFGLTPLHIATWRNHLPI-------IQRLVAAGADPDAKDGESGWSSLHRALHFGHLAVASILLQSGASITLEDSKCRTPID 137
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Match: UPI000C7199EE (ankyrin-1-like n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C7199EE) HSP 1 Score: 59.3 bits (142), Expect = 9.220e-6 Identity = 50/164 (30.49%), Postives = 66/164 (40.24%), Query Frame = 2 Query: 848 PLHVACQLGHREVCVALLKFIVSCYGHSKCLTIVNAKDRFGRSPLHLASWTPHRHFRKKGHISVRDLLAHGAD----------------------------------------VKGRDKRGLTPLHWACRAADTVTTKVLLKEGADPLAEDEQCRTPLEA-CKR 1216
PLH+ C+ + E+ L F C + + V+A+D+ GR+PLHLA H+ K + LL GAD V RDK G TPLH A ++ T + LL+ GADP DE TPL CKR
Sbjct: 373 PLHILCRSYYNEIHPFLKIFFAICDEMHQTVQ-VDARDKLGRTPLHLAL-----HYNNKEEFEL--LLRRGADPNSANAEGSTALHVICMRYRDDEFVKTFLKINDDIQQTVQVDARDKLGRTPLHLALFLSNMKTAETLLRRGADPNLTDEDGSTPLHVICKR 528
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Match: A0A1B8B0B3_FUSPO (Uncharacterized protein n=1 Tax=Fusarium poae TaxID=36050 RepID=A0A1B8B0B3_FUSPO) HSP 1 Score: 59.3 bits (142), Expect = 9.510e-6 Identity = 50/149 (33.56%), Postives = 70/149 (46.98%), Query Frame = 2 Query: 767 HLGKENDASFVPSFLGWCLGGEDSSDLPLHVACQLGHREVCVALLKFIVSCYGHSKCL----TIVNAKDRFGRSPLHLA-SWTPHRHFRKKGHISVRDLLAHGADVKGRDKRGLTPLHWACRAADTVTTKVLLKEGADPLAEDEQCRTP 1198
H E ++S P LG G+D S+ PLH + + + G +K L VNA + +PLHL W +R F + +LL+ A+V RD G +PLH AC+ DT +L+KEGAD A D+ RTP
Sbjct: 240 HSILETNSSVSP--LGCLELGDDMSETPLHTVIKTYLDDTREGTPEESHMIIGIAKLLLEHGANVNALNIGYETPLHLLLGWRNYRSFPIVP--LLEELLSKSAEVNSRDSEGCSPLHLACQKQDTQAILLLVKEGADLEALDDNRRTP 384
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Match: A0A6P6SJI2_COFAR (uncharacterized protein LOC113692116 isoform X1 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6SJI2_COFAR) HSP 1 Score: 59.3 bits (142), Expect = 9.600e-6 Identity = 35/88 (39.77%), Postives = 47/88 (53.41%), Query Frame = 2 Query: 947 VNAKDRFGRSPLHLASWTPHRHFRKKGHIS-VRDLLAHGADVKGRDKR-GLTPLHWACRAADTVTTKVLLKEGADPLAEDEQCRTPLE 1204
VNA++ FG +PLH+A+W + H+ VR LLA GAD RD G + LH A VLL+ GA ED + RTP++
Sbjct: 56 VNARNSFGLTPLHIATW--------RNHVPIVRRLLAAGADPNARDSESGWSSLHRAMHFGHLTVASVLLQSGASITLEDSKSRTPID 135
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Match: A0A5A7VDX2_CUCME (Inhibitor of Bruton tyrosine kinase isoform X2 n=11 Tax=Cucurbitaceae TaxID=3650 RepID=A0A5A7VDX2_CUCME) HSP 1 Score: 59.3 bits (142), Expect = 9.620e-6 Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 2 Query: 947 VNAKDRFGRSPLHLASWTPHRHFRKKGHIS-VRDLLAHGADVKGRD-KRGLTPLHWACRAADTVTTKVLLKEGADPLAEDEQCRTPLE 1204
+NA++ FG +PLH+A+W + HI VR LLA GAD RD + G + LH A +LL+ GA ED +CRTP++
Sbjct: 56 INARNPFGLTPLHIATW--------RNHIPIVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVACILLQCGASITLEDSKCRTPID 135
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Match: A0A3B4ZCS6_9TELE (Si:ch211-1o7.2 n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B4ZCS6_9TELE) HSP 1 Score: 55.8 bits (133), Expect = 1.170e-5 Identity = 43/128 (33.59%), Postives = 58/128 (45.31%), Query Frame = 2 Query: 851 LHVACQLGHREVCVALLKFIVSCYGHSKCLTIVNAKDRFGRSPLHLASWTPHRHFRKKGHIS--VRDLLAHGADVKGRDKRGLTPLHWACRAADTVTTKVLLKEGADPLAEDEQCRTPLEACK-RHQR 1225
LHVAC G + L+ L +N++D GR PLH+ F+ + S +R LL H AD G TPLH A ++L+K GAD LA+D TPL+ + RH R
Sbjct: 6 LHVACLYGQLDAIQLLV---------DSQLEWINSRDSEGRRPLHVVLT-----FQSSPNTSACLRYLLEHEADANRTTDSGQTPLHLAASEGLLECVEILVKAGADVLAQDSTGLTPLDFARIRHHR 119
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Match: A0A5D2WJT5_GOSMU (Uncharacterized protein n=5 Tax=Gossypium TaxID=3633 RepID=A0A5D2WJT5_GOSMU) HSP 1 Score: 58.9 bits (141), Expect = 1.250e-5 Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 2 Query: 947 VNAKDRFGRSPLHLASWTPHRHFRKKGHISVRDLLAHGADVKGRD-KRGLTPLHWACRAADTVTTKVLLKEGADPLAEDEQCRTPLE 1204
VN ++RFG +PLH+A+W H ++ L+A GAD +D + G + LH A +LL+ GA ED +CRTP++
Sbjct: 58 VNCRNRFGLTPLHIATWRNHLPI-------IQRLVAAGADPDAKDGESGWSSLHRALHFGHLAVASILLQSGASITLEDSKCRTPID 137
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Match: A0A5N6RK56_9ROSI (Uncharacterized protein n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6RK56_9ROSI) HSP 1 Score: 58.2 bits (139), Expect = 2.220e-5 Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 2 Query: 947 VNAKDRFGRSPLHLASWTPHRHFRKKGHI-SVRDLLAHGADVKGRD-KRGLTPLHWACRAADTVTTKVLLKEGADPLAEDEQCRTPLE 1204
+NA++ FG +PLH+A+W + HI +VR LLA GAD RD + G + LH A +LL+ GA ED + RTP++
Sbjct: 56 INARNAFGLTPLHIATW--------RNHIPTVRRLLAAGADPDARDGESGWSSLHRALHFGHLAVASILLQSGASITLEDSKGRTPVD 135 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1015.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1015.6.1 >prot_D-mesarthrocarpus_Contig1015.6.1 ID=prot_D-mesarthrocarpus_Contig1015.6.1|Name=mRNA_D-mesarthrocarpus_Contig1015.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=280bp MRVTDRGYLEGGVIIGPTPREGEAVSRSNDNDDTTTYRTQSNKRASEAQGback to top mRNA from alignment at D-mesarthrocarpus_Contig1015:21204..24163+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1015.6.1 ID=mRNA_D-mesarthrocarpus_Contig1015.6.1|Name=mRNA_D-mesarthrocarpus_Contig1015.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2960bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1015:21204..24163+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1015:21204..24163+ >mRNA_D-mesarthrocarpus_Contig1015.6.1 ID=mRNA_D-mesarthrocarpus_Contig1015.6.1|Name=mRNA_D-mesarthrocarpus_Contig1015.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=840bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1015:21204..24163+ (Discosporangium mesarthrocarpum MT17_79)back to top |