mRNA_D-mesarthrocarpus_Contig1015.4.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Match: A0A835Z8W8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W8_9STRA) HSP 1 Score: 202 bits (515), Expect = 2.850e-58 Identity = 109/185 (58.92%), Postives = 135/185 (72.97%), Query Frame = 3 Query: 123 MKTAVVAVALVGASCTVNAFVTPMPGGRLPRVV-VRGSSTSPMMAVPLELEGKLDPSKSWEVELELDGESKTLSVPEGTSVLEAAEKVFDDPPSSCRNGVCTTCAGFILTGKEGEGESFQVAVHALGQDQRDQGYTLTCQTYPCGPGLKVRLNQYDTVYEEQYGQFEKAEEGKKEP--KKLFGIF 668
M+ A ++VAL G +C + F+ P R+ +S+S + +VPLELEGKLDPSKSWEVEL LDGE+K ++VPEGTSVLEAAE VFDDPP SCRNGVCTTCAGFI G++ S +AVH LG+D G+TLTCQTYP GPGLKV LN+YD VY EQYG+ EK+E K+ +K+FG+F
Sbjct: 1 MRAACISVALAGLACQASGFIAA-PATRVAGCTQCARASSSALRSVPLELEGKLDPSKSWEVELVLDGETKKVTVPEGTSVLEAAEMVFDDPPFSCRNGVCTTCAGFIEEGRD----SHLMAVHGLGRDILATGFTLTCQTYPTGPGLKVALNKYDEVYWEQYGKHEKSELDKRAAGERKVFGLF 180
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Match: A0A6V1VDI3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VDI3_HETAK) HSP 1 Score: 179 bits (453), Expect = 1.990e-49 Identity = 90/151 (59.60%), Postives = 109/151 (72.19%), Query Frame = 3 Query: 210 PRVVVRGSSTSPMMAVPLELEGKLDPSKSWEVELELDGESKTLSVPEGTSVLEAAEKVFDDPPSSCRNGVCTTCAGFILTGKEGEGESFQVAVHALGQDQRDQGYTLTCQTYPCGPGLKVRLNQYDTVYEEQYGQFEKAEEGKKEPKKLFG 662
P R T M VPLELEGKLDPSK+WE+EL LDG +K ++V E VLEAAEKVFDDPP SCRNGVCTTC+ I+ GKEGE ++++AVH LG+ QG+T++CQT+ GPG+K+ LNQYDTVYE QYGQ+EK K K FG
Sbjct: 21 PSFQARSMRTPMRMGVPLELEGKLDPSKTWEIELTLDGVTKMVTVSEADCVLEAAEKVFDDPPFSCRNGVCTTCSCRIVEGKEGE--NYKLAVHGLGETALSQGFTMSCQTHVTGPGVKIELNQYDTVYEMQYGQYEKGT-AKDTKKSFFG 168
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Match: A0A835Z7P0_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P0_9STRA) HSP 1 Score: 164 bits (416), Expect = 4.460e-44 Identity = 82/142 (57.75%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 252 AVPLELEGKLDPSKSWEVELELDGESKTLSVPEGTSVLEAAEKVFDDPPSSCRNGVCTTCAGFILTGKEGEGESFQVAVHALGQDQRDQGYTLTCQTYPCGPGLKVRLNQYDTVYEEQYGQFEKAEEGKKEP---KKLFGIF 668
A+P ELE +LDP+++WEVEL L+GE+K +++PEGTSVLEAAE VFDDPP+SCRNGVC+TCAG I +G S + AV LGQD +GY LTCQTYP GPG+KV LN+ D VY +QYG+ + E+ +K K+FG+F
Sbjct: 35 AMPQELETELDPARTWEVELTLNGETKVVTIPEGTSVLEAAELVFDDPPNSCRNGVCSTCAGHI----DGGANSVRYAVSGLGQDLLGEGYALTCQTYPAGPGVKVSLNKMDEVYMQQYGKHSEEEQERKMSGGKTKVFGMF 172
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Match: A0A4D9D4I2_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4I2_9STRA) HSP 1 Score: 159 bits (403), Expect = 4.310e-42 Identity = 83/183 (45.36%), Postives = 115/183 (62.84%), Query Frame = 3 Query: 138 VAVALVGASCTVNAFVTP------MPGGRLPRVVVRGSSTSPMMAVPLELEGKLDPSKSWEVELELDGESKTLSVPEGTSVLEAAEKVFDDPPSSCRNGVCTTCAGFILTGKEGEGESFQVAVHALGQDQRDQGYTLTCQTYPCGPGLKVRLNQYDTVYEEQYGQFEKAEEGKKEPKKLFGIF 668
+ AL+ C V+ F+ P R P + GS+ + VP +LEG+LDP + W+V + L+GE+KT+SV EGTS+L+AAE+ F DPP CRNGVCTTCA + G G S+ A+ +L +Q++ G+ L+CQTYPCGPGL+VRLN + VYE QY ++E + E KK F IF
Sbjct: 4 ITTALIVLPCIVSGFLVPAVPSITFSDSRAPTRLYVGSNAK--IDVPPDLEGRLDPKRHWDVVMSLNGETKTVSVSEGTSLLDAAEEAFGDPPCMCRNGVCTTCAAEVTRGGHG---SWVAAIESLSPEQQESGFILSCQTYPCGPGLEVRLNAQEEVYESQYAKYETKAHEELEKKKGFNIF 181
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Match: A0A7S2XX00_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX00_9STRA) HSP 1 Score: 155 bits (393), Expect = 3.100e-41 Identity = 72/146 (49.32%), Postives = 104/146 (71.23%), Query Frame = 3 Query: 231 SSTSPMMAVPLELEGKLDPSKSWEVELELDGESKTLSVPEGTSVLEAAEKVFDDPPSSCRNGVCTTCAGFILTGKEGEGESFQVAVHALGQDQRDQGYTLTCQTYPCGPGLKVRLNQYDTVYEEQYGQFEKAEEGKKEPKKLFGIF 668
S + VP+ELEG+L+P+ W+V + +GE+K ++VPE ++LEA+E++F D P SCRNG+CTTCA + G+E S +AVH L +QR++GYTL CQ+Y GPGLKV L +YD VYE+QYG++E+ ++ +E KK GIF
Sbjct: 1 SGVKSLNVVPVELEGQLNPANKWDVSITFNGETKVITVPEDQNILEASEELFGDVPCSCRNGICTTCAAMVTGGEE----SLTLAVHGLSAEQREKGYTLCCQSYATGPGLKVELGKYDEVYEDQYGKYERNQQ--EEKKKFLGIF 140
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Match: A0A0G4EXA3_VITBC (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EXA3_VITBC) HSP 1 Score: 154 bits (390), Expect = 5.860e-41 Identity = 73/122 (59.84%), Postives = 95/122 (77.87%), Query Frame = 3 Query: 255 VPLELEGKLDPSKSWEVELELDGESKTLSVPEGTSVLEAAEKVFDDPPSSCRNGVCTTCAGFILTGKEGEGESFQVAVHALGQDQRDQGYTLTCQTYPCGPGLKVRLNQYDTVYEEQYGQFE 620
VP++LEG+LDPS+SW +EL DG+ +T+ VPEGTSVLEAAE V++DPP CRNGVCT+CAG I+ GK GE ++ + +L + +D+GY LTCQTY CGPGLKV LN+ + VY QYG+FE
Sbjct: 6 VPVDLEGRLDPSRSWTIELNYDGDIETVEVPEGTSVLEAAETVWEDPPCDCRNGVCTSCAGRIVGGKLGE--AYVINRDSLEEVTKDKGYVLTCQTYVCGPGLKVELNKNEEVYGMQYGRFE 125
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Match: A0A4D9D796_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D796_9STRA) HSP 1 Score: 151 bits (382), Expect = 3.010e-39 Identity = 74/138 (53.62%), Postives = 97/138 (70.29%), Query Frame = 3 Query: 255 VPLELEGKLDPSKSWEVELELDGESKTLSVPEGTSVLEAAEKVFDDPPSSCRNGVCTTCAGFILTGKEGEGESFQVAVHALGQDQRDQGYTLTCQTYPCGPGLKVRLNQYDTVYEEQYGQFEKAEEGKKEPKKLFGIF 668
VPLELEG+LDP+K+W+V++ GE+K L+V E T +LEAAEK +D P SCRNG+CTTCAG ++ + + E A+H L +Q G+ LTCQT+PCGPGL+V L YDTVYE QYGQ+EK + E K F +F
Sbjct: 41 VPLELEGQLDPTKTWDVKMTYKGETKVLTVSEDTCILEAAEKEWD-VPCSCRNGICTTCAGRVIANPDSKKE----AIHGLSAEQSKNGFVLTCQTHPCGPGLEVELGMYDTVYESQYGQYEK--KATTEQKSKFNVF 171
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Match: A0A0G4I4U4_9ALVE (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I4U4_9ALVE) HSP 1 Score: 123 bits (309), Expect = 1.390e-28 Identity = 60/132 (45.45%), Postives = 84/132 (63.64%), Query Frame = 3 Query: 249 MAVPLELEGKLDPSKSWEVELELDGESKTLSVPEGTSVLEAAEKVFDDPPSSCRNGVCTTCAGFILTGKEGEGESFQVAVHALGQDQRDQGYTLTCQTYPCGPGLKVRLNQYDTVYEEQYGQFEKAEEGKKE 644
+ +P +L G L+P +WE++L L G+ T +PEG SVLEAAE++F+D P CRNGVCTTC+ + GKEGE + + +L Q++ GY +TCQTY G L ++D VY+ QYG E E GKK+
Sbjct: 80 VTIPEDLIGSLNPKNTWEIDLNLKGQKATAIIPEGMSVLEAAEQIFEDAPFDCRNGVCTTCSAKVTGGKEGE--DYLLNRDSLEGKQKEAGYQMTCQTYVKNKGCSFDLGKHDEVYQLQYGWAELIESGKKQ 209
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Match: A0A7S3EJ51_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJ51_9RHOD) HSP 1 Score: 98.6 bits (244), Expect = 2.020e-20 Identity = 54/130 (41.54%), Postives = 77/130 (59.23%), Query Frame = 3 Query: 288 SKSWEVELELDGESKTLSVPEGTSVLEAAEKVFDDPPSSCRNGVCTTCAGFILTGKEGEGESFQVAVHALGQDQRDQGYTLTCQTYPCGPGLKVRLNQYDTVYEEQYGQFEK---AEEGKKEPKKLFGIF 668
+KS++VE+ELDGE T+ V + LEA E SSCR GVC TCA IL GK GE+ AL + ++ G+ LTC +P G+K+++ +++ Y+ QYGQ+EK AEE ++ L GIF
Sbjct: 31 AKSYDVEIELDGEDHTIPVKSDETFLEAIENFGLTVDSSCRAGVCMTCAAKILAGKVDVGEA------ALADEVKESGFVLTCSAFPRSEGIKLKMQEFEDAYDMQYGQYEKERQAEESAEKTGFLTGIF 154
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Match: A0A8J6RMU9_9CYAN (2Fe-2S iron-sulfur cluster binding domain-containing protein n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A8J6RMU9_9CYAN) HSP 1 Score: 83.2 bits (204), Expect = 1.270e-15 Identity = 46/112 (41.07%), Postives = 66/112 (58.93%), Query Frame = 3 Query: 288 SKSWEVELELDGESKTLSVPEGTSVLEAAEKVFDDPPSSCRNGVCTTCAGFILTGKEGEGESFQVAVHALGQDQRDQGYTLTCQTYPCGPGLKVRLNQYDTVYEEQYGQFEK 623
SK++ VE++ G S+T+ VPE ++L+AA D PSSC GVCTTCA I+ GK + + V+ + + QGY L C YP LK+ + D +YE Q+GQF+K
Sbjct: 2 SKTYTVEIQHQGTSQTIEVPEDKAILQAAYAAGIDLPSSCNAGVCTTCAAKIVEGKVDQTDGMGVS-----PELQAQGYALLCIAYPRS-NLKIETEKEDELYELQFGQFQK 107 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1015.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1015.4.1 >prot_D-mesarthrocarpus_Contig1015.4.1 ID=prot_D-mesarthrocarpus_Contig1015.4.1|Name=mRNA_D-mesarthrocarpus_Contig1015.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=183bp MKTAVVAVALVGASCTVNAFVTPMPGGRLPRVVVRGSSTSPMMAVPLELEback to top mRNA from alignment at D-mesarthrocarpus_Contig1015:7202..11249+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1015.4.1 ID=mRNA_D-mesarthrocarpus_Contig1015.4.1|Name=mRNA_D-mesarthrocarpus_Contig1015.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4048bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1015:7202..11249+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1015:7202..11249+ >mRNA_D-mesarthrocarpus_Contig1015.4.1 ID=mRNA_D-mesarthrocarpus_Contig1015.4.1|Name=mRNA_D-mesarthrocarpus_Contig1015.4.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=549bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1015:7202..11249+ (Discosporangium mesarthrocarpum MT17_79)back to top |