mRNA_D-mesarthrocarpus_Contig10138.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A2D8PV15_9PROT (ATP synthase subunit a n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PV15_9PROT) HSP 1 Score: 437 bits (1123), Expect = 6.200e-154 Identity = 221/249 (88.76%), Postives = 238/249 (95.58%), Query Frame = 1 Query: 1 LATDTHGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747 +ATDTHGGE+HSPLEQFEIKEL+PIEIGGN ++FTNSALMMVIAV LI++LM++GTRK+AMIPGRWQ+ AE+ YEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGM PYSFTFTSHIAVTFAMA+VVF+GVT LGFAKHG+ FFS FVPPGVP WMWPLMIPIEVISYLSRP SLAMRLFANMLAGHTLLKVFAGF+PALGAAG+LPLAFVGALTGLE LIAFLQAYVFAILTCLYINDALHLH Sbjct: 1 MATDTHGGEKHSPLEQFEIKELIPIEIGGNDISFTNSALMMVIAVALIVLLMVVGTRKQAMIPGRWQAIAEMFYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMVPYSFTFTSHIAVTFAMAMVVFLGVTXLGFAKHGLHFFSXFVPPGVPXWMWPLMIPIEVISYLSRPXSLAMRLFANMLAGHTLLKVFAGFVPALGAAGILPLAFVGALTGLEMLIAFLQAYVFAILTCLYINDALHLH 249
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A520P0B3_9PROT (ATP synthase subunit a n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520P0B3_9PROT) HSP 1 Score: 426 bits (1096), Expect = 8.070e-150 Identity = 214/249 (85.94%), Postives = 231/249 (92.77%), Query Frame = 1 Query: 1 LATDTHGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747 +ATDTHGGE+HSPLEQFEIKELVPIEI GN ++FTNSALMMVI + LI +LM+ GTRKRAMIPGRWQ AE+CYEFVA LIRDTVGNEGRKYFPFIF+LFMFILFGNMLGM PYSFTFTSHIAVTFAMA+VVF+GVTILGFAKHG+ FFS FVPPGVP+WMWPL+IPIE+ISYLSRP+SLAMRLFANMLAGHTLLKVFAGF+P LGAAGVLPLAFV LT LE LIAFLQAYVF ILTCLYINDALHLH Sbjct: 1 MATDTHGGEKHSPLEQFEIKELVPIEIAGNDISFTNSALMMVITIALICLLMLAGTRKRAMIPGRWQVVAEVCYEFVAGLIRDTVGNEGRKYFPFIFSLFMFILFGNMLGMVPYSFTFTSHIAVTFAMAMVVFVGVTILGFAKHGVHFFSLFVPPGVPIWMWPLLIPIEIISYLSRPISLAMRLFANMLAGHTLLKVFAGFVPVLGAAGVLPLAFVVPLTALELLIAFLQAYVFTILTCLYINDALHLH 249
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A2S6Q9F3_9PROT (ATP synthase subunit a n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6Q9F3_9PROT) HSP 1 Score: 417 bits (1073), Expect = 2.580e-146 Identity = 209/249 (83.94%), Postives = 230/249 (92.37%), Query Frame = 1 Query: 1 LATDTHGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747 +A +T+G E+HSPLEQFEIKEL+PIE+ GN ++FTNSALMMVIAV LI +LM+ GTR+RA+IP RWQ AE+CYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGM PYSFTFTSHIAVTFAMA+VVF GVTILG +KHG+ FF+ FVPPGVP+WMWPLMIPIE+ISYLSRP+SLAMRLFANMLAGHTLLKVFAGF+P LGAAGVLPLAFVGALT LE LIAFLQAYVF ILTCLYINDALHLH Sbjct: 1 MANNTNGAEKHSPLEQFEIKELIPIEVAGNDISFTNSALMMVIAVALICLLMLAGTRRRAIIPSRWQMVAEICYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMVPYSFTFTSHIAVTFAMAMVVFTGVTILGLSKHGMHFFTLFVPPGVPMWMWPLMIPIEIISYLSRPISLAMRLFANMLAGHTLLKVFAGFVPLLGAAGVLPLAFVGALTALELLIAFLQAYVFTILTCLYINDALHLH 249
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A2D8G7A8_9PROT (ATP synthase subunit a n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G7A8_9PROT) HSP 1 Score: 408 bits (1049), Expect = 1.050e-142 Identity = 206/242 (85.12%), Postives = 222/242 (91.74%), Query Frame = 1 Query: 22 GEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747 GE+HSPLEQFEIKEL+PI IGG +FTNSALMMV+ V LI LM++GTR+RAMIPGRWQ AE+CY+FVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGM PYSFTFTSHIAVTFAMA+VVF GVT+LG AKHGI FFS FVPPGVP+WMWPLMIPIE+ISYLSRP+SLAMRLFANMLAGHTLLKVFAGF+P LGAAG+ PLAFVGALT LE LIAFLQAYVF ILTCLYINDALHLH Sbjct: 5 GEKHSPLEQFEIKELIPINIGGTDXSFTNSALMMVVTVALICXLMLVGTRRRAMIPGRWQVVAEMCYQFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMLPYSFTFTSHIAVTFAMAMVVFTGVTLLGXAKHGIHFFSXFVPPGVPIWMWPLMIPIEIISYLSRPISLAMRLFANMLAGHTLLKVFAGFVPLLGAAGIXPLAFVGALTALELLIAFLQAYVFTILTCLYINDALHLH 246
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A3M1M6J6_9PROT (ATP synthase subunit a n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1M6J6_9PROT) HSP 1 Score: 369 bits (946), Expect = 5.650e-127 Identity = 189/244 (77.46%), Postives = 213/244 (87.30%), Query Frame = 1 Query: 16 HGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747 HGG HSPL QFEIKE+VP+++GG ++FTNS+LMMVIAV L ++G R+ A++PGRWQSAAEL YEFVA L RDTVG+EGR+YFP +FTLFMFIL GN+LGM PYSFTFTSHI VTFAMA VVF+GVTILGFAKHG+ FFSFFVPPG P+WMWPL+IPIE+ISYLSRP+SL++RLFANMLAGHTLLKV AGFI LG AGVLPLA V ALTGLE LIAFLQAYVF ILTCLYINDALHLH Sbjct: 7 HGG-GHSPLVQFEIKEIVPLKLGGIDISFTNSSLMMVIAVALTAGFFLIGMRRGALVPGRWQSAAELTYEFVAGLFRDTVGHEGRRYFPAVFTLFMFILVGNLLGMVPYSFTFTSHIIVTFAMAAVVFVGVTILGFAKHGLHFFSFFVPPGSPVWMWPLLIPIEIISYLSRPISLSVRLFANMLAGHTLLKVIAGFIAMLGVAGVLPLALVVALTGLEILIAFLQAYVFTILTCLYINDALHLH 249
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A2E5PJC7_9PROT (ATP synthase subunit a n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PJC7_9PROT) HSP 1 Score: 360 bits (923), Expect = 1.350e-123 Identity = 182/238 (76.47%), Postives = 207/238 (86.97%), Query Frame = 1 Query: 34 SPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747 SPLEQFEIK L+P+ +GG ++F NS+L MV LI+ MMLGTR RA++P R+Q A EL YEF+ANL+RDTVGNEGRKYFPFIFTLFMF+LFGN+LGM PYSFTFTSHI VTFA+A+V+FIGVTILGFAKHG FFSFF+PPG PL MWPL+IPIEVISYLSRP+SL++RLFANMLAGHTLLKV AGF+ ALG G++P AFV LTGLE LIAFLQAYVFAILTCLYINDALHLH Sbjct: 4 SPLEQFEIKTLIPLNLGGVDVSFANSSLYMVATFVLIVAFMMLGTRHRALVPNRFQCAVELSYEFIANLLRDTVGNEGRKYFPFIFTLFMFVLFGNLLGMTPYSFTFTSHIVVTFALAIVIFIGVTILGFAKHGFHFFSFFLPPGTPLPMWPLLIPIEVISYLSRPISLSVRLFANMLAGHTLLKVIAGFVAALGVFGIVPFAFVVVLTGLEILIAFLQAYVFAILTCLYINDALHLH 241
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A8J7N4U9_9PROT (ATP synthase subunit a n=1 Tax=Candidatus Odyssella sp. TaxID=2589116 RepID=A0A8J7N4U9_9PROT) HSP 1 Score: 359 bits (922), Expect = 2.130e-123 Identity = 185/243 (76.13%), Postives = 209/243 (86.01%), Query Frame = 1 Query: 19 GGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747 E+HSPLEQF IK L+PI+IGG L+FTNSAL MV+AV L+ +LM G KR ++PGR QS AE+ YEFVANLI++TVG EGRKYFP IFTLFMFIL GNM+GM P +FTFTSHIAVTFAMA VVF+ VTILGF KHG FFS FVPPGVP+ MWPL+IPIE+ISY SRP+SL++RLFANMLAGHTLLKV AGF+PALG AG++PLAFV ALTGLE LIAFLQAYVFAILTCLYINDALHLH Sbjct: 2 AAEKHSPLEQFLIKPLIPIKIGGVDLSFTNSALFMVVAVVLVALLMTAGMGKRGLVPGRIQSIAEMAYEFVANLIKETVGAEGRKYFPLIFTLFMFILVGNMIGMIPSTFTFTSHIAVTFAMAAVVFVAVTILGFVKHGAHFFSLFVPPGVPIAMWPLLIPIEIISYFSRPISLSVRLFANMLAGHTLLKVLAGFVPALGVAGIIPLAFVTALTGLEILIAFLQAYVFAILTCLYINDALHLH 244
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A6N9BFX9_9PROT (ATP synthase subunit a n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N9BFX9_9PROT) HSP 1 Score: 358 bits (919), Expect = 1.370e-122 Identity = 180/243 (74.07%), Postives = 209/243 (86.01%), Query Frame = 1 Query: 19 GGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747 G+ H PLEQF I+ELV I + G L TNS + M +A ++ +M+ GTR+RA++PGR QS AEL YEF+A ++RDTVG+EGRKYFP IFTLFMFILFGN+ GM PYSFTFTSHIAVTFAMA VVF+GVT+LGF KHG+ FFSFFVPPGV + MWPL+IPIE+ISYLSRP+SL++RLFANMLAGHTLLKVFAGF+PALG AG+LPLAFV ALTGLE +IAFLQAYVFAILTCLYINDALHLH Sbjct: 25 AGDAHGPLEQFRIRELVDIPVAGVDLDITNSTVWMAVAAAGVIAVMVGGTRRRALVPGRLQSIAELAYEFIAGMVRDTVGDEGRKYFPLIFTLFMFILFGNLAGMIPYSFTFTSHIAVTFAMAAVVFVGVTVLGFIKHGLHFFSFFVPPGVSILMWPLLIPIEIISYLSRPISLSVRLFANMLAGHTLLKVFAGFVPALGVAGILPLAFVSALTGLEIVIAFLQAYVFAILTCLYINDALHLH 267
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A7X2FT70_9PROT (ATP synthase subunit a n=1 Tax=Alphaproteobacteria bacterium HT1-32 TaxID=2665153 RepID=A0A7X2FT70_9PROT) HSP 1 Score: 352 bits (904), Expect = 1.130e-120 Identity = 181/241 (75.10%), Postives = 208/241 (86.31%), Query Frame = 1 Query: 25 EQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAAGVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747 E HSPL QFEIK LVPI++G +FTNS+ MVI+V L + ++ G RK M+PGRWQS AEL Y FVANLIRDTVG EG KYFPFIF+LFMFILFGN+LGM PYSFTFTSHIAVTFAMALVVF+GVT++ AKHG+ FFSFF+PPGVP+ M PL++PIE+ISYLSRP+SL++RLFANM AGHTLLKVFAGF+ +LG AGVLPLAFV ALTGLEF+IAFLQAYVF ILTCLY+NDALHLH Sbjct: 3 ENHSPLAQFEIKTLVPIDLGSFDASFTNSSAFMVISVLLATVFLVGGMRKGEMVPGRWQSMAELSYVFVANLIRDTVGTEGAKYFPFIFSLFMFILFGNLLGMMPYSFTFTSHIAVTFAMALVVFVGVTVIAVAKHGLHFFSFFMPPGVPIAMAPLLVPIEIISYLSRPISLSVRLFANMTAGHTLLKVFAGFVASLGVAGVLPLAFVTALTGLEFVIAFLQAYVFTILTCLYLNDALHLH 243
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Match: A0A2E6GQU6_9PROT (ATP synthase subunit a n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GQU6_9PROT) HSP 1 Score: 350 bits (897), Expect = 1.510e-119 Identity = 179/246 (72.76%), Postives = 211/246 (85.77%), Query Frame = 1 Query: 13 THGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMLMMLGTRKRAMIPGRWQSAAELCYEFVANLIRDTVGNEGRKYFPFIFTLFMFILFGNMLGMAPYSFTFTSHIAVTFAMALVVFIGVTILGFAKHGIKFFSFFVPPGVPLWMWPLMIPIEVISYLSRPVSLAMRLFANMLAGHTLLKVFAGFIPALGAA-GVLPLAFVGALTGLEFLIAFLQAYVFAILTCLYINDALHLH 747 T E HSPL QFEIK L+P+++G ++FTNSAL M + + L+ + ++LG R+RA++PGRWQS AEL YEFVAN++RD VGN+GRKYFPF+F+LFMFILFGNMLGM PYSFTFTSHI VTFA+A VVFIGVT+LGF KHG FFSFFVPPGV + +WPL+IPIE+ISYLSRPVSL++RLFANMLAGHTLLKVFAGFI +LG G +PLAFV AL+GLE LIAFLQAYVF ILTCLYINDALH+H Sbjct: 2 TLAAEGHSPLAQFEIKTLIPLKMGEIDVSFTNSALFMTLTLVLVTLFLVLGMRQRALVPGRWQSMAELSYEFVANMLRDNVGNDGRKYFPFVFSLFMFILFGNMLGMIPYSFTFTSHIIVTFALAAVVFIGVTVLGFVKHGFHFFSFFVPPGVSVALWPLLIPIEIISYLSRPVSLSVRLFANMLAGHTLLKVFAGFIISLGIYFGWVPLAFVVALSGLEILIAFLQAYVFTILTCLYINDALHMH 247 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10138.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10138.1.1 >prot_D-mesarthrocarpus_Contig10138.1.1 ID=prot_D-mesarthrocarpus_Contig10138.1.1|Name=mRNA_D-mesarthrocarpus_Contig10138.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=250bp LATDTHGGEQHSPLEQFEIKELVPIEIGGNSLAFTNSALMMVIAVTLILMback to top mRNA from alignment at D-mesarthrocarpus_Contig10138:1480..2229- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10138.1.1 ID=mRNA_D-mesarthrocarpus_Contig10138.1.1|Name=mRNA_D-mesarthrocarpus_Contig10138.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=750bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10138:1480..2229- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10138:1480..2229- >mRNA_D-mesarthrocarpus_Contig10138.1.1 ID=mRNA_D-mesarthrocarpus_Contig10138.1.1|Name=mRNA_D-mesarthrocarpus_Contig10138.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=750bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10138:1480..2229- (Discosporangium mesarthrocarpum MT17_79)back to top |