mRNA_D-mesarthrocarpus_Contig10130.1.2 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Match: D8LHV9_ECTSI (Putative: silimar to centromere/kinetochore protein zw10 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHV9_ECTSI) HSP 1 Score: 186 bits (472), Expect = 2.560e-50 Identity = 107/224 (47.77%), Postives = 138/224 (61.61%), Query Frame = 1 Query: 1 RFAARRRRSLLSEARALMLGDYHNSVEQPHINNPADVGAAPPDGDXXXXXXXXXSRQKRVTGEDSISRIEGHYSSRNSRGWKARVFWGGRCQVTAVARGLVDLVHSTLDEACSEKVPLQCAKELFRTARDILELFRAVVPVHHGNTIDSVPRMGALFHNDCLFLAMHCLVMGQRCRKMLPPSLRLRSTMVDMAPLFRELGQASLSGQVHRQRLQLEEFFRGVKV 672 RF+A+RRR+LL +AR L LGDYHN+VE +++ + GA+ + S + + + S I GH N K + F CQV+ VA LV LV +TL EACS+++PL CAKELFRTARD+L+LFRAVVPV H N +D VPR+ A+F NDCL+LA H + +G R LPP +TM+D LFREL S S Q RQ+ QL EFF GV V Sbjct: 436 RFSAKRRRTLLQQARDLALGDYHNTVE---VSDALEGGASSDEA----------SSEGVTSAKGSKMGIYGHDKDNN----KTQAFRLEACQVSTVASSLVALVRATLAEACSDQIPLHCAKELFRTARDMLDLFRAVVPVQHANALDGVPRIAAVFQNDCLYLAHHMVTLGHEFRHGLPPPANQTATMIDTVHLFRELAAHSFSEQQQRQQRQLHEFFVGVDV 642
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Match: A0A836CAB9_9STRA (Centromere/kinetochore Zw10-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAB9_9STRA) HSP 1 Score: 129 bits (323), Expect = 3.870e-30 Identity = 93/242 (38.43%), Postives = 114/242 (47.11%), Query Frame = 1 Query: 4 FAARRRRSLLSEARALMLGDYHNSVEQPHINNPADVGAAPPDGDXXXXXXXXXSRQKRVTGEDSISRIEGHYSSRNSRGWKARVFWGGRCQ---------------VTAVARGLVDLVHSTLDEACSE--KVPLQCAKELFRTARDILELFRAVVPVHHGNTIDSVPRMGALFHNDCLFLAMHCLVMGQRCRKMLPPSLRLRSTMVDMAPLFRELGQASLSGQVHRQRLQLEEFFRGVKVTG 678 FAA RRR+LL AR MLGDYHNS P G D ++ + G S + + + RVF CQ VT V + ++ H L EAC E +VP A+ELFRTARD+LELFRAVVP HG + +VPR+ ALFHNDC FLA H +G R R+ LPP + +TMVDM + RQR QL EF G G Sbjct: 741 FAAVRRRALLCAARDAMLGDYHNST---------------PAG-------------------DEVAAVAG--SGKKALASQQRVFVFEACQEIXXXXXXXXXXXXXVTQVVQQVLAKAHEALAEACEEGAQVPPLIARELFRTARDVLELFRAVVPARHGEQMQNVPRLAALFHNDCAFLAHHAATIGHRYRQRLPPPVNSVATMVDM---------------IQRQREQLLEFCAGADFVG 931
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Match: A0A7S2MDJ5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MDJ5_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.780e-28 Identity = 86/230 (37.39%), Postives = 116/230 (50.43%), Query Frame = 1 Query: 1 RFAARRRRSLLSEARALMLG-DYHNSVEQPHINNPADVGAAPPDGDXXXXXXXXXSRQKRVTGEDSISRIEGHYSSRNSRGW------KARVFWGGRCQVTAVARGLVDLVHSTLDEACSEKVPLQCAKELFRTARDILELFRAVVPVHHGNTIDSVPRMGALFHNDCLFLAMHCLVMGQRCRKMLPPSLRLRSTMVDMAPLFRELGQASLSGQVHRQRLQLEEFFRGVK 669 R+A++RR LL EAR LM+ DYHNSV VG D+I +G + N+ + + + RC VT VA ++ L S L +AC K L A L+RTAR+I++LFRAVVP HH + S+PR+ ALFHNDCLFLA L + R R LP L +TMVDM P R LG+ L Q+ Q+ + + +GV+ Sbjct: 362 RWASKRREELLVEARNLMVTEDYHNSVP---------VG-------------------------DAIRDTQGDNDNNNNADFVLIEDEEDQFMALPRCHVTQVAVDVLALTRSALAKACDSKDILPAAT-LYRTAREIMDLFRAVVPQHHATALASLPRLAALFHNDCLFLAHAALTLAHRYRSRLPTPLNKCATMVDMVPPLRALGKQVLQHQISVQQATVNDLVKGVQ 556
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Match: A0A7S2RK91_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RK91_9STRA) HSP 1 Score: 118 bits (295), Expect = 1.910e-26 Identity = 58/132 (43.94%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 271 CQVTAVARGLVDLVHSTLDEACSEKVPLQCAKELFRTARDILELFRAVVPVHHGNTIDSVPRMGALFHNDCLFLAMHCLVMGQRCRKMLPPSLRLRSTMVDMAPLFRELGQASLSGQVHRQRLQLEEFFRGV 666 C VT VA+ LV + H + +AC A L+RTAR++++LFRAV+P H T+ S+PR ALFHNDCL+LA L + + R LP L +T+VD+ P R LG+ L Q+ Q+ QL+EF +GV Sbjct: 531 CHVTTVAKDLVLMAHEAMHKACGASS--LAAATLYRTARELMDLFRAVIPQRHSETLQSLPRSAALFHNDCLYLAHEALTLAHQYRGRLPAPLNKTATLVDVVPALRSLGEQVLQRQISLQQGQLDEFLKGV 660
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Match: A0A1Y1IF84_KLENI (Centromere/kinetochore protein zw10 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IF84_KLENI) HSP 1 Score: 117 bits (292), Expect = 4.740e-26 Identity = 57/130 (43.85%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 256 FWGGRCQVTAVARGLVDLVHSTLDEACSEKVPLQCAKELFRTARDILELFRAVVPVHHGNTIDSVPRMGALFHNDCLFLAMHCLVMGQRCRKMLPPSLRLRSTMVDMAPLFRELGQASLSGQVHRQRLQL 645 F+ CQV+ + L +L H L EA + A +L RTARD+L+L+RA+VPV + ++SVP++ +FHNDCL++A H L++G + + LPPSLR ST+ D+AP F +L + SGQV +QR +L Sbjct: 507 FYLPTCQVSTAVQQLAELAHEALREATQSSA--RTALQLHRTARDVLQLYRAIVPVQRQHQLESVPQLAMVFHNDCLYIAHHALMLGIQYKNALPPSLRDLSTLADLAPAFEQLADVTRSGQVRQQRDEL 634
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Match: A0A0D2WI78_CAPO3 (Centromere/kinetochore protein zw10 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WI78_CAPO3) HSP 1 Score: 113 bits (282), Expect = 1.010e-24 Identity = 73/216 (33.80%), Postives = 108/216 (50.00%), Query Frame = 1 Query: 4 FAARRRRSLLSEARALMLGDYHNSVEQPHINNPADVGAAPPDGDXXXXXXXXXSRQKRVTGEDSISRIEGHYSSRNSRGWKARVFWGGRCQVTAVARGLVDLVHSTLDEACSEKVPLQCAKELFRTARDILELFRAVVPVHHGNTIDSVPRMGALFHNDCLFLAMHCLVMGQRCRKMLPPSLRLRSTMVDMAPLFRELGQASLSGQVHRQRLQLEE 651 FAA++R+ +L+ AR+ ML + HNSV N+ A+ G A + Q G + + F CQ+T R +VD+ + L+E + + A LF RD+ +L+RAVVPVHHG T + VP +G LFHNDC+F+A H + +G + + LPP + +T VDM FR+LG+ Q+ QR L E Sbjct: 427 FAAKKRQDVLAAARSCMLSEDHNSVV---CNSSAERGGAGSAAFPTTAVMADAALQPATDGSE-----------------RPVTFDFPDCQITQRTRKIVDMAYDMLEEVTTSSPAI--AVHLFVAVRDMFDLYRAVVPVHHGATFERVPMLGMLFHNDCMFIAHHLITLGIQFKSRLPPPMNATATFVDMVVPFRQLGERFFVHQMDLQRDLLIE 620
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Match: A0A5D6XL82_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL82_9STRA) HSP 1 Score: 105 bits (262), Expect = 4.440e-22 Identity = 78/227 (34.36%), Postives = 111/227 (48.90%), Query Frame = 1 Query: 4 FAARRRRSLLSEARALMLGDYHNSVE----QPHINNPADVGAAPPDGDXXXXXXXXXSRQKRVTGEDSISRIEGHYSSRNSRGWKARVFWGGRCQVTAVARGLVDLVHSTLDEACSEKVPLQCAKELFRTARDILELFRAVVPVHHGNTIDSVPRMGALFHNDCLFLAMHCLVMGQRCRKMLPPSLRLRSTMVDMAPLFRELGQASLSGQVHRQRLQLEEFFRGVKV 672 +A +RR+S+LS+ R +M Y++SV+ N A VG+ D S G D + G + N R V+ A +V+L H TL E C+ + +CA LF+T+RD+L LFRAVVP + + I + PR LFHNDCL+ + H L +G + LP L TM+DM P FRE G+ +L V R Q +E G+ V Sbjct: 424 YAKKRRQSVLSQGRDMMRRGYNDSVKITGATERCNLEASVGSGKKDKGGAGAAAAAVSM---AGGVDDVE--SGAFQVPNYR-------------VSTCAHDVVELAHQTLIEGCTSEP--KCASLLFQTSRDLLVLFRAVVPTLYESDIANDPRACMLFHNDCLYASYHMLTVGHLYKHRLPVPLNRTGTMIDMVPAFREAGEKAL---VAYARAQTDELALGLAV 627
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Match: A0A2D4BZC4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZC4_PYTIN) HSP 1 Score: 104 bits (259), Expect = 4.760e-22 Identity = 74/227 (32.60%), Postives = 109/227 (48.02%), Query Frame = 1 Query: 4 FAARRRRSLLSEARALMLGDYHNSVE----QPHINNPADVGAAPPDGDXXXXXXXXXSRQKRVTGEDSISRIEGHYSSRNSRGWKARVFWGGRCQVTAVARGLVDLVHSTLDEACSEKVPLQCAKELFRTARDILELFRAVVPVHHGNTIDSVPRMGALFHNDCLFLAMHCLVMGQRCRKMLPPSLRLRSTMVDMAPLFRELGQASLSGQVHRQRLQLEEFFRGVKV 672 +A +RR+ +L AR M DY N++ N A G+ DG S+ K + + + + G S + + C A +V+L H T+ EAC+ + CA LF+T+RD+L LFRAVVP + + I + R LFHNDC+++A H L +G + LP L TMVDM P FRE +++LS R L+E G+K Sbjct: 76 YAKKRRQQILVSARETMNRDYCNAIRVTGATERCNIDASAGSGKKDG----------SKGKTSSVSSTNASVSGDADDVESGCFAMPDYVVSHC-----AHDVVELAHQTMIEACAAETT--CASVLFQTSRDVLFLFRAVVPTLYSSEIGNDARTCMLFHNDCMYIAYHMLTIGHLYKSRLPVKLGAMVTMVDMVPAFREAAESALSSFA---RSLLDEIISGIKA 282
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Match: K3WH87_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH87_GLOUD) HSP 1 Score: 104 bits (260), Expect = 8.180e-22 Identity = 79/225 (35.11%), Postives = 118/225 (52.44%), Query Frame = 1 Query: 4 FAARRRRSLLSEARALMLGDYHNSVE----QPHINNPADVGAAPPDGDXXXXXXXXXSRQKRVTGEDSISRIEGHYSSRNSRGWKARVFWGGRCQVTAVARGLVDLVHSTLDEACSEKVPLQCAKELFRTARDILELFRAVVPVHHGNTIDSVPRMGALFHNDCLFLAMHCLVMGQRCRKMLPPSLRLRSTMVDMAPLFRELGQASLSGQVHRQRLQLEEFFRGV 666 +A +RR+S+LS+ R +M Y++SV+ N A VG+ G XXXXX + V GE+ S F +++ A +V+L H TL EAC+ +CA+ LF+T+RD+L LFRAVVP + I + PR L+HNDCL++A H L +G + + LP L TMVDM P FR++G+ +L + + Q++E G Sbjct: 423 YAKKRRQSILSQGREMMSRGYNDSVKIVGATERCNLEASVGSGKKKGXXXXXXASNGAIA--VNGEEVES----------------GAFHVPDYRISTCAHDVVELAHQTLIEACTTSES-KCAQLLFQTSRDLLFLFRAVVPTLYERDIVNDPRACMLYHNDCLYIAYHMLTIGHQYKHRLPAPLNRTGTMVDMVPAFRDVGEKAL---ISYAKSQIDEIAAGA 625
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Match: A0A3M6VEA1_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VEA1_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.520e-21 Identity = 74/221 (33.48%), Postives = 111/221 (50.23%), Query Frame = 1 Query: 7 AARRRRSLLSEARALMLGDYHNSVEQPHINNPADVGAAPPDGDXXXXXXXXXSRQKRVTGEDSISRIEGHYSSRNSRGWKARVFWGGRCQVTAVARGLVDLVHSTLDEACSEKVPLQCAKELFRTARDILELFRAVVPVHHGNTIDSVPRMGALFHNDCLFLAMHCLVMGQRCRKMLPPSLRLRSTMVDMAPLFRELGQASLSGQVHRQRLQLEEFFRGVK 669 A +RR+++LS R LM YH+SV+ + + A+ S +K +GE I+ ++ ++ F +VT A +V+LVH TL EAC+ A LF+TARD+ LFR V+ + N I + PR L+HNDC+++ H LV+G + LP L +TMVDM P FRE+G +L+ Q+EE G+K Sbjct: 444 AKKRRQTILSSGRDLMRQGYHDSVKIMGASEKCCLNAS------------TGSGKKGTSGEKKGLGIDDTPDRWSTDDVESSYFQVPNYRVTVCAHEVVELVHQTLVEACASGETN--ANLLFQTARDLFFLFRTVISTLYDNDIANDPRTCMLYHNDCIYITHHMLVVGHIYKDRLPAPLNQTATMVDMVPSFREVGDQALASFAS---AQMEEAVSGIK 647 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10130.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10130.1.2 >prot_D-mesarthrocarpus_Contig10130.1.2 ID=prot_D-mesarthrocarpus_Contig10130.1.2|Name=mRNA_D-mesarthrocarpus_Contig10130.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=259bp RFAARRRRSLLSEARALMLGDYHNSVEQPHINNPADVGAAPPDGDGAGGGback to top mRNA from alignment at D-mesarthrocarpus_Contig10130:684..4208+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10130.1.2 ID=mRNA_D-mesarthrocarpus_Contig10130.1.2|Name=mRNA_D-mesarthrocarpus_Contig10130.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3525bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10130:684..4208+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10130:684..4208+ >mRNA_D-mesarthrocarpus_Contig10130.1.2 ID=mRNA_D-mesarthrocarpus_Contig10130.1.2|Name=mRNA_D-mesarthrocarpus_Contig10130.1.2|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=777bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10130:684..4208+ (Discosporangium mesarthrocarpum MT17_79)back to top |