Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10128.1.1 vs. uniprot
Match:
A0A6H5LBL5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBL5_9PHAE)
HSP 1 Score: 99.8 bits (247), Expect = 1.750e-17
Identity = 165/542 (30.44%), Postives = 199/542 (36.72%), Query Frame = 3
Query: 897 PSFRGIDSLQTIPEDSAGFVLVNR--STLCEHGPGCQCWDWS-EHGPGALQGTTSVGSPSESYLA-AANPYRGPATPARGWGGGGDRGTGAAAGPLFTG------LGSIWHTIRVGGVGLA----RRAPWSRRARGGGGTVGRGSRPARETQQQQLKXXXXXXDVGVAAFSGATCSPSRAGHTRQKH-SPHEPGAPAFSSVRTAGQ------GSPTKEKLS----GTQCVPAGQVQGQGQGPGLGHESRRQHSEPTDVNSRAPTPF-----------------HALHNPGNPSDHNPPLPSASVDGPLAYNIXXXXXXXXGTLTHVPPQAPGAVGGRDMVGRDMVGGAGQHPMVAAPSPDPTLCPSPMATASSYRAVQDSTQQGLGGPVTHAAATSAAALPAASAWGASLRPPPLFAGEEKERNIAQAALERAKVVGQRAILVVTLADEAAQEALALELPSPRHGVGLGAGVLDEGCRGGKRGVGNNGGAGGRDVSGLCGGGGIPVHHDRRRQARLVEALALYMKASGMLRGSLPGVLEACD 2396
PSFRG DSL TIPEDS GFVLV R S CEHGP C+CW WS V SPS SYLA A+NPY GP A LGSIW+T G+A RRA WS ARG GG QQ + V A GA+ R H SPH S+VR G+ GSP + S G+ V QG G + R+ ++ R P+ H +P + H+ P P A DG +YN G L + GA R G D GG Q +V SLR +AA +RA+VVG+RAIL+VTL D+ AQEA+AL L SP D G R G G +G H RRR L EALALY+KA +L+G+LPG L C+
Sbjct: 769 PSFRGSDSLLTIPEDSTGFVLVTRPSSVSCEHGPHCECWAWSASXXXXXXXXXXXVRSPSASYLATASNPYGGPGKEAXXXXXXXXXXXXXXXXXXXXXXXXXAFLGSIWNTAVNTFRGVAGAHGRRASWST-ARGRGG------------QQHRASVSPPTAAVSPAHMRGASSPRERRQQXXXXHLSPH-------SNVRKGGRVSGSPLGSPCSGRSSDDSRGSNNVVYTHRQGGDDGGKVAAVMRQANANAAVSAYRTDVPYQQGTGGSSYFQQQQHRHHPTSHPLHHRSHSEP-PRARADG--SYNTHGG-----GVL-----EGSGAELYRGR-GYDGSGGVNQVELVE-----------------------------------------------------SLR--------------VKAAADRAEVVGKRAILLVTLGDKTAQEAMALALESPSADP-------DGGARAAAAAAGRAEGGPAVFAAGAA--------HARRRHDMLTEALALYVKALALLQGALPGALVVCE 1194
BLAST of mRNA_D-mesarthrocarpus_Contig10128.1.1 vs. uniprot
Match:
D8LHF6_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF6_ECTSI)
HSP 1 Score: 83.2 bits (204), Expect = 9.100e-13
Identity = 83/211 (39.34%), Postives = 95/211 (45.02%), Query Frame = 3
Query: 897 PSFRGIDSLQTIPEDSAGFVLVNR--STLCEHGPGCQCWDWSEHGPGALQGTTSVGSPSESYLA-AANPYRGPATPARGWGGGGDRGTGAAAGPLFTG--LGSIWHT----IRVGGVGLARRAPWSRRARGGGGTVGRGSRPARETQQQQLKXXXXXXDVGVAAFSGATCSPSRAGHTRQKH-SPHEPGAPAFSSVRTAGQGSPTKEKLSG 1499
PSFRG DSL TIPEDS GFVLV R S CEHG C+CW WS + G +V SPS SYLA A+NPY GP A LGSIW+T R G RRA WS RG GG QQ + V A GA+ R +Q+H SPH + A VR +G SP + SG
Sbjct: 317 PSFRGSDSLLTIPEDSTGFVLVTRPSSVSCEHGSHCECWAWSANAGGCA---AAVMSPSASYLATASNPYGGPGKEAXXXXXXXXXXXXXXXXXXXXXAFLGSIWNTAVNTFRGVAGGHGRRASWSA-VRGRGG------------QQHRASVSPPTAAVSPAHVRGASSPRER---QQQQHLSPH---SNARKGVRVSG--SPLRSPCSG 503
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10128.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 1.75e-17 / Id = 30.44 Expect = 9.10e-13 / Id = 39.34 Sequence A0A6H5LBL5_9PHAE D8LHF6_ECTSI
Match Name E-value Identity Description
A0A6H5LBL5_9PHAE 1.750e-17 30.44 Protein kinase domain-containing protein n=1 Tax=E... [more] D8LHF6_ECTSI 9.100e-13 39.34 Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 1 Model size 2873 Hectar predicted targeting category other localisation Exons 1 Ec32 ortholog description hypothetical protein Ec32 ortholog Ec-11_004260.1 Cds size 2868
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789157.553579-UTR-D-mesarthrocarpus_Contig10128:1267..1272 1680789157.553579-UTR-D-mesarthrocarpus_Contig10128:1267..1272 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig10128 1268..1272 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789157.5632591-CDS-D-mesarthrocarpus_Contig10128:1272..4140 1680789157.5632591-CDS-D-mesarthrocarpus_Contig10128:1272..4140 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig10128 1273..4140 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10128.1.1
>prot_D-mesarthrocarpus_Contig10128.1.1 ID=prot_D-mesarthrocarpus_Contig10128.1.1|Name=mRNA_D-mesarthrocarpus_Contig10128.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=956bp
MVAAADPLLDLGLQFEGVGMGGMGVGNEEAWAWTGSMGGQEVQHFPPPPQ back to top mRNA from alignment at D-mesarthrocarpus_Contig10128:1268..4140+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig10128.1.1 ID=mRNA_D-mesarthrocarpus_Contig10128.1.1|Name=mRNA_D-mesarthrocarpus_Contig10128.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2873bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10128:1268..4140+ (Discosporangium mesarthrocarpum MT17_79)CAGGG ATGGTGGCTGCGGCAGACCCCTTGCTGGATTTGGGTCTTCAGTTT
GAGGGGGTGGGGATGGGGGGGATGGGGGTTGGGAATGAGGAGGCATGGGC
TTGGACTGGTAGTATGGGGGGGCAGGAGGTTCAGCACTTCCCGCCTCCCC
CGCAGCCCCCACCTGGGGTGGCTGCAGCAGCAGCGAGGACTGGGGCAGGG
GCAGGGGCAGGGGCAAGTCCTGCTGCTGTTGGGGTCAACTTGGCGGACAT
GGCAGGAGGGGGGACAGGGGATGGGGCAGTGCAAGGTTTGGGTGGCCTGC
CAAGGGGCAATGAGGAGCAGGGCTCTGTGGCTAACGCTGCCTCCAGATCA
ATGCCCAACAGAAGCAGCAGCAGCAGCAACACAAACAAACACCCATGGGA
GTCAGGGGGAGGGCCACCGGCAGTACAAGTAACAACCACCACGACAACGA
TGACGACGGCGCCATCATCTCAGCACGCCCTGCCACTCCATAGCCCGTCC
GCCCACCCGGCCAGCCCGGAGCAGGTCTTCTACACTGGGAGGGACGGGGT
GGTGCTGCCCCCCCTCGCCTCCCCCGCACGAGGGTTGGCACGGTGTTCCC
CTCCCCAGACCCCTTCACCACAAGACGCACCACGATACCCGTCCACCGTG
GCAGCAGCGGGTGAAAGTCGGGCAGGGGCTGGGGCAGGGGGCAGGGGCAG
AGATGTTTCAGGATCCCTGTCAAACCCACGGCAAGCGTCGTATTCCCCCC
AATCAGTGGGCCAATCCCTGGCAACCTCTTCCCCAAAGGGTGTGCTTGTG
CCCCTTACCGGGGACATTTGTGACAGCCCTGGTGGGGGTGCAGGGGCAGG
GGCAGGGGCTGGAGCTGGGGCTGGAGGGGTGGGCATACCTAAGTACCCCA
GCTTCCGGGGCATTGACAGCCTGCAGACCATCCCGGAGGACTCAGCCGGG
TTCGTCCTCGTCAACCGCTCCACCCTCTGTGAGCATGGGCCTGGGTGCCA
GTGCTGGGACTGGTCCGAGCATGGCCCTGGGGCGCTCCAGGGCACCACTT
CTGTGGGCTCGCCCTCGGAGTCCTACCTGGCAGCAGCCAACCCATACAGG
GGCCCAGCGACACCTGCAAGGGGCTGGGGCGGGGGTGGGGATAGGGGCAC
AGGGGCTGCGGCGGGGCCACTCTTCACAGGCCTTGGGTCCATCTGGCACA
CCATCAGGGTTGGGGGCGTGGGCTTGGCAAGGAGGGCACCATGGTCCCGA
CGGGCCAGGGGAGGTGGGGGGACAGTGGGAAGGGGGAGTCGACCGGCCCG
GGAGACACAGCAGCAGCAGCTGAAAGACCAGCAACAGCTGAAGGACGTGG
GCGTGGCTGCTTTCTCAGGCGCAACTTGCTCACCTTCACGGGCAGGGCAC
ACTAGGCAAAAGCACTCCCCCCATGAACCAGGGGCGCCTGCCTTCTCTTC
TGTCCGGACAGCAGGGCAGGGCTCCCCTACCAAGGAAAAACTGTCTGGCA
CACAGTGCGTGCCAGCAGGGCAGGTGCAGGGGCAAGGGCAGGGGCCAGGA
CTGGGACATGAGTCCCGCCGCCAGCACTCGGAGCCCACTGATGTGAACAG
TCGCGCTCCTACACCCTTCCATGCCCTCCACAACCCCGGAAACCCCAGCG
ACCACAACCCCCCCTTGCCATCCGCATCTGTGGATGGACCCCTGGCCTAC
AATATCCCTTCCCCATCCCCCTGTCACGATGGAACCCTGACCCATGTACC
ACCACAAGCCCCTGGGGCAGTGGGGGGGAGGGACATGGTCGGCAGGGACA
TGGTCGGCGGGGCCGGGCAGCACCCTATGGTTGCAGCACCCAGCCCTGAC
CCCACCCTGTGCCCCAGCCCCATGGCCACTGCTTCCAGCTACAGGGCTGT
ACAGGACTCCACTCAGCAGGGGCTGGGGGGGCCCGTGACGCATGCGGCGG
CTACGTCTGCTGCAGCACTGCCAGCTGCATCGGCTTGGGGGGCGAGTCTG
CGCCCACCACCCCTGTTTGCAGGGGAGGAAAAGGAGAGGAACATAGCCCA
GGCGGCATTGGAGCGGGCAAAGGTGGTAGGCCAGCGTGCCATTTTGGTGG
TGACCCTCGCAGATGAGGCTGCTCAAGAGGCTCTGGCCCTAGAGCTGCCC
TCCCCGCGGCATGGGGTGGGGCTGGGGGCAGGGGTGCTGGACGAGGGCTG
CAGAGGAGGAAAACGAGGCGTTGGCAACAACGGAGGAGCTGGAGGAAGAG
ACGTTTCCGGCCTGTGTGGGGGTGGGGGTATTCCCGTGCACCATGACCGG
CGGCGGCAGGCGAGGCTTGTGGAAGCGCTGGCGCTGTACATGAAGGCCTC
TGGCATGCTGCGGGGCTCCCTGCCTGGTGTCCTTGAGGCCTGCGACAGGT
CCGAGCAAGGCAGGGAGTCCACCGCCTGTGCACCACCCACCTCCTCTTAC
CCTGCAGACCACTCTTGTGAGAGCAGGTGCCTGTCAGAGAGGGATGCAGC
GGCCACATCAGCCGTGGCGGCCGCAGCCATGGCAGTTGCAGTGGGGGGGG
TAGGCGTGGCAGTATCGCTTCAGCAGGGCCAGCAGCCATGGCTACCGCAA
AGGCAACAAGCCCATGTGCAGCACCACCTGCAGCCACCCCCGTCGCCCCC
GCCTGACCAGCACCACACCATGCCCTCGCTCCGGGAGCAGCTGGAGTGGC
TCAAGGGCCTCTTCACCAAGACTCTGCAACGCACAGAGCAGTGCCGGCTC
CGGGTCTTGGCAACCACAACATTGTCCGGTGCGGGGGCAGAGGCAGGGGC
AGGGGCTGGGGCAAGTGCAGGAGCAGCAGTAGGCACTACACCAGGCCTTG
CCCAGAAACAATTGCAGAAATCC back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10128:1268..4140+
>mRNA_D-mesarthrocarpus_Contig10128.1.1 ID=mRNA_D-mesarthrocarpus_Contig10128.1.1|Name=mRNA_D-mesarthrocarpus_Contig10128.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2868bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10128:1268..4140+ (Discosporangium mesarthrocarpum MT17_79) back to top