mRNA_D-mesarthrocarpus_Contig10127.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Match: D8LPZ6_ECTSI (CBF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPZ6_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 7.650e-22 Identity = 50/78 (64.10%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 22 RFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVALAKRLLQVSAQSDSALAAAALFVVSESFRKRPEIR 255
RFY+ALY KLLS DL AS+PVLFLNL Y+A++AD E R+ A AKRLLQV+A D+ LAAA LFVVSE+ +K P++R
Sbjct: 664 RFYAALYAKLLSSDLGGASNPVLFLNLVYKAIKADTEEARAAAFAKRLLQVTAVCDAPLAAAGLFVVSEALKKHPDLR 741
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Match: A0A3P9P9A0_POERE (CCAAT enhancer binding protein zeta n=1 Tax=Poecilia reticulata TaxID=8081 RepID=A0A3P9P9A0_POERE) HSP 1 Score: 82.4 bits (202), Expect = 1.940e-16 Identity = 47/87 (54.02%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 1 ASESLRDRFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVALAKRLLQVSAQSDSALAAAALFVVSESFRKRPEIRSL 261
A +S+ DRFY ALY KLL P LA+A LFLNL ++AL+AD R A AKRLLQV+AQ + AA ALF+VSE + +P +R L
Sbjct: 456 AQQSVSDRFYVALYRKLLDPGLAAAPRQNLFLNLLFKALKADVAPRRIKAFAKRLLQVAAQQGACFAAGALFLVSEVMKAKPGLRML 542
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Match: A0A7S3LPV8_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LPV8_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 4.830e-16 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 1 ASESLRDRFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVALAKRLLQVSAQSDSALAAAALFVVSESFRKRPEI 252
+ +L DRFY ALY KLLSP+L S+S LFLNL YRA++AD R A AKRLLQV+ S + AA ALF++S + +PE+
Sbjct: 95 SKNTLSDRFYRALYAKLLSPELLSSSKQTLFLNLLYRAMKADVTLNRLRAFAKRLLQVACMSSAQFAAGALFLLSWVVQAKPEL 178
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Match: M3ZZ86_XIPMA (CBF domain-containing protein n=1 Tax=Xiphophorus maculatus TaxID=8083 RepID=M3ZZ86_XIPMA) HSP 1 Score: 80.9 bits (198), Expect = 6.730e-16 Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 1 ASESLRDRFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVALAKRLLQVSAQSDSALAAAALFVVSESFRKRPEIRSL 261
A +S+ DRFY ALY KLL P LA++ LFLNL ++AL+AD R A AKRLLQV+AQ + AA ALF++SE + +P +R L
Sbjct: 468 AQQSVSDRFYVALYRKLLDPGLAASPRQSLFLNLLFKALKADVAPRRVKAFAKRLLQVAAQQGACFAAGALFLISEVMKAQPGLRML 554
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Match: A0A3B5RFM9_XIPMA (CBF domain-containing protein n=19 Tax=Poeciliinae TaxID=586240 RepID=A0A3B5RFM9_XIPMA) HSP 1 Score: 80.9 bits (198), Expect = 6.750e-16 Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 1 ASESLRDRFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVALAKRLLQVSAQSDSALAAAALFVVSESFRKRPEIRSL 261
A +S+ DRFY ALY KLL P LA++ LFLNL ++AL+AD R A AKRLLQV+AQ + AA ALF++SE + +P +R L
Sbjct: 456 AQQSVSDRFYVALYRKLLDPGLAASPRQSLFLNLLFKALKADVAPRRVKAFAKRLLQVAAQQGACFAAGALFLISEVMKAQPGLRML 542
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Match: UPI00148FA731 (CCAAT/enhancer-binding protein zeta n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148FA731) HSP 1 Score: 80.5 bits (197), Expect = 9.240e-16 Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 1 ASESLRDRFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVALAKRLLQVSAQSDSALAAAALFVVSESFRKRPEIRSL 261
+ +S+ DR+Y+ALY KLL P L+S+S +FLNL Y++L+AD R A KRLLQVSA+ +++ A ALF+VSE R +P ++ L
Sbjct: 490 SQQSISDRYYTALYRKLLDPGLSSSSRQSMFLNLLYKSLKADIVLRRVKAFVKRLLQVSAEQNASFACGALFLVSEVMRAKPSLKVL 576
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Match: I3KR14_ORENI (CCAAT enhancer binding protein zeta n=19 Tax=Pseudocrenilabrinae TaxID=318546 RepID=I3KR14_ORENI) HSP 1 Score: 80.1 bits (196), Expect = 1.270e-15 Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = 1 Query: 1 ASESLRDRFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVALAKRLLQVSAQSDSALAAAALFVVSESFRKRPEIRSL 261
+ +S+ DR+Y ALY KLL P L+S+S P +FLNL Y++++AD R A KRLLQ+SA+ ++ A ALF+VSE R +P ++ L
Sbjct: 592 SQQSISDRYYVALYRKLLDPGLSSSSRPNMFLNLLYKSMKADVALRRVKAFVKRLLQISAEQSASFACGALFLVSEVMRAKPGLKIL 678
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Match: A0A8C5E2G1_9TELE (CCAAT enhancer binding protein zeta n=2 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5E2G1_9TELE) HSP 1 Score: 79.3 bits (194), Expect = 2.350e-15 Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 1 ASESLRDRFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVALAKRLLQVSAQSDSALAAAALFVVSESFRKRPEIRSL 261
+ +S+ DR+Y ALY KLL P L+S+S +FLNL Y++L+AD R A KRLLQ+SA+ +S+ ALF+VSE R +P ++ L
Sbjct: 525 SQQSVSDRYYVALYKKLLDPGLSSSSKQSMFLNLLYKSLKADVCVRRVKAFVKRLLQISAEQNSSFTCGALFLVSEVMRSKPSLKML 611
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Match: UPI001CF69A23 (CCAAT/enhancer-binding protein zeta isoform X2 n=1 Tax=Thunnus albacares TaxID=8236 RepID=UPI001CF69A23) HSP 1 Score: 79.3 bits (194), Expect = 2.360e-15 Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 1 Query: 1 ASESLRDRFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVALAKRLLQVSAQSDSALAAAALFVVSESFRKRPEIRSL 261
+ +S+ DR+Y ALY KLL P L+S+S +FLNL Y++L+AD R A KRLLQVSA+ +++ A ALF+VSE + +P +R L
Sbjct: 553 SQQSVSDRYYVALYRKLLDPGLSSSSRQSMFLNLLYKSLKADIVLRRVKAFVKRLLQVSAEQNASFACGALFLVSEVMKAKPSLRML 639
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Match: UPI001C4CC664 (CCAAT/enhancer-binding protein zeta n=3 Tax=Thunnus TaxID=8234 RepID=UPI001C4CC664) HSP 1 Score: 79.3 bits (194), Expect = 2.360e-15 Identity = 42/87 (48.28%), Postives = 60/87 (68.97%), Query Frame = 1 Query: 1 ASESLRDRFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVALAKRLLQVSAQSDSALAAAALFVVSESFRKRPEIRSL 261
+ +S+ DR+Y ALY KLL P L+S+S +FLNL Y++L+AD R A KRLLQVSA+ +++ A ALF+VSE + +P +R L
Sbjct: 552 SQQSVSDRYYVALYRKLLDPGLSSSSRQSMFLNLLYKSLKADIVLRRVKAFVKRLLQVSAEQNASFACGALFLVSEVMKAKPSLRML 638 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10127.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10127.2.1 >prot_D-mesarthrocarpus_Contig10127.2.1 ID=prot_D-mesarthrocarpus_Contig10127.2.1|Name=mRNA_D-mesarthrocarpus_Contig10127.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=87bp ASESLRDRFYSALYVKLLSPDLASASSPVLFLNLCYRALRADRETGRSVAback to top mRNA from alignment at D-mesarthrocarpus_Contig10127:773..1801+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10127.2.1 ID=mRNA_D-mesarthrocarpus_Contig10127.2.1|Name=mRNA_D-mesarthrocarpus_Contig10127.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1029bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10127:773..1801+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10127:773..1801+ >mRNA_D-mesarthrocarpus_Contig10127.2.1 ID=mRNA_D-mesarthrocarpus_Contig10127.2.1|Name=mRNA_D-mesarthrocarpus_Contig10127.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=261bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10127:773..1801+ (Discosporangium mesarthrocarpum MT17_79)back to top |