mRNA_D-mesarthrocarpus_Contig10126.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Match: A0A6H5KSY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY2_9PHAE) HSP 1 Score: 215 bits (547), Expect = 6.810e-64 Identity = 197/315 (62.54%), Postives = 210/315 (66.67%), Query Frame = 1 Query: 13 IGAEAARAQVASLTVEKELNEARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEASSREK---GLQLQASQKAEDRVKAMEDMVKERERIISSLETELTPNPNPKHDCNSNPNPLQVSRQGKAIVGLQQEREKFGGELSEAQGMYMQALEDVKARMTPALTLREMRITELGKKVLDWEAKLKQQQQLYESVRSDRNLYSKNLVEAQDEIAEMKRKFKIMNHQIEQLKEDITAK 948 + AE A AQ + T++K+L+EARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTKD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GLQLQA+QKAEDR+K I L+QEREK G ELSEAQ +YMQ+LEDVK MRI ELG K+ DWE KLKQQQQLYESVRSDRNLYSKNL+EAQDEIAEMKRK KIMNHQIEQLKEDITAK Sbjct: 1 MSAELATAQGSGQTLDKQLSEARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTKDNEIARHLTELGQWERKMEREKNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLQLQATQKAEDRMK------------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQEREKLGSELSEAQNIYMQSLEDVK-----------MRINELGNKISDWEVKLKQQQQLYESVRSDRNLYSKNLIEAQDEIAEMKRKLKIMNHQIEQLKEDITAK 292
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Match: A0A836CGY9_9STRA (Flagellar associated protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGY9_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.600e-49 Identity = 136/299 (45.48%), Postives = 168/299 (56.19%), Query Frame = 1 Query: 76 ARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEASSREKGLQLQA--------SQKAEDRVKAMEDMVKERERIISSLETELTPNPNPKHDCNSNPNPLQVSRQGKAIVGLQQEREKFGGELSEAQGMYMQALEDVKARMTPALTLREMRITELGKKVLDWEAKLKQQQQLYESVRSDRNLYSKNLVEAQDEIAEMKRKFKIMNHQIEQLKEDITAK 948 AR TMEKYL DYD LF RTQKL+EDL++Q +N+QL + A++ K + EA +GLQ + + + E++ +A ED VKE+++IISSLE EL C+ +V+R K + L++EREKFG ELS+A+ MYMQALEDVK LREMRI ELGK+V +WE KLKQQQQLYESVRSDRNLYSK+L+EAQDEIAEMKRKFKIMNHQIEQLKE+ITAK Sbjct: 273 ARGTMEKYLHDYDALFGRTQKLSEDLDEQARRNAQLEADVAKAERATKAR------------------------ADDAQKLEGDIVQWERRLEREHKHTGKFKALYDASKAPLSEAQLEIRGLQAELDVFRHREEAHRKEEKSRATEDDVKEKDQIISSLEAEL---------CSYK---SEVARGRKDLARLEREREKFGEELSDARQMYMQALEDVK--------LREMRINELGKRVGEWEGKLKQQQQLYESVRSDRNLYSKSLIEAQDEIAEMKRKFKIMNHQIEQLKEEITAK 527
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Match: A0A024ULA7_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024ULA7_9STRA) HSP 1 Score: 148 bits (373), Expect = 4.070e-36 Identity = 117/301 (38.87%), Postives = 154/301 (51.16%), Query Frame = 1 Query: 55 VEKELNEARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---EASSREKGLQLQASQKAEDRVKAMEDMVKERERIISSLETELTPNPNPKHDCNSNPNPLQVSRQGKAIVGLQQEREKFGGELSEAQGMYMQALEDVKARMTPALTLREMRITELGKKVLDWEAKLKQQQQLYESVRSDRNLYSKNLVEAQDEIAEMKRKFKIMNHQIEQLKEDITAK 948 +EK+L EA+ATMEKY+RDY+TL+NR+QKLTE L DQ KN QL +E + EIK K+ +A RE+ +Q++A+QKAE+R + + D VK ERI +LE EL N + ++Q K I A E++K L++MRI E+ KKV + + KLKQQQQLYE+VRSDRNLYSKNL+E+QDEIAEMKRKFKI+NHQIEQLKE+++AK Sbjct: 270 LEKQLAEAQATMEKYVRDYETLYNRSQKLTELLNDQNDKNMQLEVERREFEAEIKAKNDDITKLKLEKNMAERKIDKEKRNTQKVEAKLEEECTNKLVLQTQIKSMQKDLDSDKRVEEAQKAELDALERERTIQIKAAQKAEERARMIGDEVKTNERIAKNLEAEL------------NGYKQEATKQRKLIYXXXXXXXXXXXXXXXXXXXXXXAQEEIK--------LKDMRIYEMQKKVTEGDGKLKQQQQLYEAVRSDRNLYSKNLIESQDEIAEMKRKFKIINHQIEQLKEEVSAK 550
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Match: A0A3R7WKI4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7WKI4_9STRA) HSP 1 Score: 143 bits (361), Expect = 9.060e-35 Identity = 118/302 (39.07%), Postives = 156/302 (51.66%), Query Frame = 1 Query: 52 TVEKELNEARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTK-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--ASSREKGLQLQASQKAEDRVKAMEDMVKERERIISSLETELTPNPNPKHDCNSNPNPLQVSRQGKAIVGLQQEREKFGGELSEAQGMYMQALEDVKARMTPALTLREMRITELGKKVLDWEAKLKQQQQLYESVRSDRNLYSKNLVEAQDEIAEMKRKFKIMNHQIEQLKEDITAK 948 T+EK+L +A+ATMEKY+RDY+TL+NR+QKLTE L DQ N QL +E + EIK K D E A RE+ +Q++A+QKAE+RV+ + D VK ER+ +LE EL N + ++Q K I L A E++K L++MR+ E+ KKV + + KLKQQQQLYE+VRSDRNLYSKNL+E+QDEIAEMKRKFKI+NHQIEQLKE+++AK Sbjct: 47 TLEKQLADAQATMEKYVRDYETLYNRSQKLTELLNDQ---NMQLEVERREFELEIKAKTDDITKLKLEKNMAERRIDKEKRNTQKVEGKLEDEWTNKLVLQTQLKSMQKDLDADKRVEEAQKAELNALERERSIQIKATQKAEERVRQICDDVKTNERVAKNLEAEL------------NGYKQEAAKQRKLIYQLXXXXXXXXXXXXXXXXXXXXAQEEIK--------LKDMRMYEMQKKVTEGDGKLKQQQQLYEAVRSDRNLYSKNLIESQDEIAEMKRKFKIINHQIEQLKEEVSAK 325
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Match: A0A7S1SSR2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SSR2_9CHLO) HSP 1 Score: 133 bits (335), Expect = 6.030e-34 Identity = 76/119 (63.87%), Postives = 93/119 (78.15%), Query Frame = 1 Query: 592 LQVSRQGKAIVGLQQEREKFGGELSEAQGMYMQALEDVKARMTPALTLREMRITELGKKVLDWEAKLKQQQQLYESVRSDRNLYSKNLVEAQDEIAEMKRKFKIMNHQIEQLKEDITAK 948 ++ +Q K I L++EREK+GGE SEA YMQALE+VK LREM I +L KK+ + + +LKQQQ LYE+VRSDRNLYSKNL+EAQDEI EMKRKFKI+NHQIEQLKE+I+AK Sbjct: 53 VEAQKQQKLIYQLEKEREKYGGEASEANSKYMQALEEVK--------LREMAIIDLQKKIAEGDNRLKQQQNLYEAVRSDRNLYSKNLIEAQDEIQEMKRKFKIINHQIEQLKEEISAK 163
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Match: A0A7S3HBA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBA8_9STRA) HSP 1 Score: 133 bits (334), Expect = 8.370e-33 Identity = 100/301 (33.22%), Postives = 158/301 (52.49%), Query Frame = 1 Query: 55 VEKELNEARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAS---SREKGLQLQASQKAEDRVKAMEDMVKERERIISSLETELTPNPNPKHDCNSNPNPLQVSRQGKAIVGLQQEREKFGGELSEAQGMYMQALEDVKARMTPALTLREMRITELGKKVLDWEAKLKQQQQLYESVRSDRNLYSKNLVEAQDEIAEMKRKFKIMNHQIEQLKEDITAK 948 +E++L +A+ATMEKYLRDYD L RT+ +++DLE + +L +N +K++K K + + ++EK +Q++A+++AE+R K D E +R +L E +++R KAI L+++RE+ G E+SE +G +++ ED+K L++++I +L K+V +WE KLKQQQQLYE+VR+DRN YSK L+E+QDEIAE+++KFKI+ HQIEQLKE+I +K Sbjct: 24 LERQLIDAKATMEKYLRDYDLLLERTKTVSDDLEVEATTVKKLQANILNLEKDLKLKHIEVGRLNTEKGLLERRVDKEHRSALHYQQLLEESKTPLTVAQAEIESLKKDLIAAHRHELSLNKVTDKIAKEKEVQMKATERAEERTKEQIDAAAELQRANETLVAEAAVYKE------------EIARLRKAIYQLEKDRERLGNEVSEQRGGFVRTQEDLK--------LKDIQIADLKKRVTEWEGKLKQQQQLYEAVRADRNHYSKGLLESQDEIAELRKKFKILGHQIEQLKEEIASK 304
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Match: A0A7S0WUC3_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WUC3_9CHLO) HSP 1 Score: 137 bits (345), Expect = 2.050e-32 Identity = 112/303 (36.96%), Postives = 149/303 (49.17%), Query Frame = 1 Query: 49 LTVEKELNEARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---EASSREKGLQLQASQKAEDRVKAMEDMVKERERIISSLETELTPNPNPKHDCNSNPNPLQVSRQGKAIVGLQQEREKFGGELSEAQGMYMQALEDVKARMTPALTLREMRITELGKKVLDWEAKLKQQQQLYESVRSDRNLYSKNLVEAQDEIAEMKRKFKIMNHQIEQLKEDITAK 948 L +E+ L E R+ +K R+Y+ L + QKL DLE+Q++ N+QL EN E+K K+ E RE+ + + +AE+ + D+VK E +LE E+ ++ +Q K I L++EREK+G E S+A Y+QALE+VK LREM I +L KK+ + E KLKQQQ LYE+VRSDRNLYSKNL+EAQDEI EMKRKFKIMNHQIEQLKE+I AK Sbjct: 256 LRLEQMLKEQRSNTDKAQREYNHLNEKVQKLHRDLEEQIHTNTQLLAENSQKQVELKVKEDEIQSIKMEAMRVNKVREQTLNKLKQVERQCQDLEKTRSELKSEINTLERDIELGRKMAEAERKKQEELMRERDILNKLKTQAENATQRQMDLVKINENTKKNLEQEIQGYK------------VEAQKQAKMIYQLEKEREKYGAEASDATAKYLQALEEVK--------LREMAIIDLQKKIAEGENKLKQQQNLYEAVRSDRNLYSKNLIEAQDEIQEMKRKFKIMNHQIEQLKEEIGAK 538
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Match: A0A2R5H2Q8_9STRA (Cilia-and flagella-associated protein 58 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H2Q8_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.120e-32 Identity = 91/179 (50.84%), Postives = 119/179 (66.48%), Query Frame = 1 Query: 418 EASSREKGLQLQ--ASQKAEDRVKAMEDMVKERERIISSLETELTPNPNPKHDCNSNPNPLQVSRQGKAIVGLQQEREKFGGELSEAQGMYMQALEDVKARMTPALTLREMRITELGKKVLDWEAKLKQQQQLYESVRSDRNLYSKNLVEAQDEIAEMKRKFKIMNHQIEQLKEDITAK 948 E + ++GL+LQ A + + + K + D VK ER +LE E+ + S+Q K I L+++REK+G E SEA Y QALE +K L+EM++ E+ KKV++ E KLKQQQQLYE+VRSDRNLYSKNL+E+QDEIAEMKRKFKIMNHQ+EQLKE+ITAK Sbjct: 387 EVDTLKRGLELQEKAVSREQQKTKVVADQVKVSERTSKNLENEIYAFKQ------------EASKQRKLIYQLEKDREKYGVEASEAGAKYHQALEQIK--------LKEMQMGEMQKKVVESENKLKQQQQLYEAVRSDRNLYSKNLIESQDEIAEMKRKFKIMNHQVEQLKEEITAK 545
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Match: D7FKG1_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG1_ECTSI) HSP 1 Score: 137 bits (344), Expect = 2.890e-32 Identity = 152/268 (56.72%), Postives = 167/268 (62.31%), Query Frame = 1 Query: 7 QKIGAEAARAQVASLTVEKELNEARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEASSREK---GLQLQASQKAEDRVKAMEDMVKERERIISSLETELTPNPNPKHDCNSNPNPLQVSRQGKAIVGLQQEREKFGGELSEAQGMYMQALEDVKARMTPALTLREMRITELGKKVLDWEAKLKQQ 801 +++ AE A AQ + T++K+L+EARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTKD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GLQLQA+QKAEDR+K I L+QEREK G ELSEAQ +YMQ+LEDVK LR+MRI ELG K+ DWE KLKQQ Sbjct: 254 EQMSAELATAQGSGQTLDKQLSEARATMEKYLRDYDTLFNRTQKLTEDLEDQMYKNSQLSLENINADKEIKTKDNEIARHLTELGQWERKMEREKNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLQLQATQKAEDRMK------------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEQEREKLGSELSEAQNIYMQSLEDVK--------LRQMRINELGNKISDWEVKLKQQ 501
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Match: A0A7S3XSB1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSB1_HETAK) HSP 1 Score: 132 bits (332), Expect = 1.980e-31 Identity = 84/169 (49.70%), Postives = 111/169 (65.68%), Query Frame = 1 Query: 454 ASQKAEDRVKAMEDMVKERERIISSLETELTPNPNPKHDCNSNPNPLQVSRQG----KAIVGLQQEREKFGGELSEAQGMYMQALEDVKARMTPALTLREMRITELGKKVLDWEAKLKQQQQLYESVRSDRNLYSKNLVEAQDEIAEMKRKFKIMNHQIEQLKEDITAK 948 A+Q+AE + + E V ER+R++ LE E+ + ++G K + L++ERE+ G E +E + + +ALE+VK L+EMR+ EL KKV +WEAKLKQQQQLYESVR DRN+YSK L+EAQDEIAE KRKFKIMNHQI+QLKE+I AK Sbjct: 4 AAQRAEAQAREEEGKVVERDRVVEHLEDEVAG----------------LKKEGGQLRKLVFELEKERERHGREAAEQRNLCKEALEEVK--------LKEMRVNELAKKVAEWEAKLKQQQQLYESVRGDRNVYSKALIEAQDEIAETKRKFKIMNHQIDQLKEEIAAK 148 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10126.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10126.1.1 >prot_D-mesarthrocarpus_Contig10126.1.1 ID=prot_D-mesarthrocarpus_Contig10126.1.1|Name=mRNA_D-mesarthrocarpus_Contig10126.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=316bp QQQKIGAEAARAQVASLTVEKELNEARATMEKYLRDYDTLFNRTQKLTEDback to top mRNA from alignment at D-mesarthrocarpus_Contig10126:123..4170- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10126.1.1 ID=mRNA_D-mesarthrocarpus_Contig10126.1.1|Name=mRNA_D-mesarthrocarpus_Contig10126.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=4048bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10126:123..4170- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10126:123..4170- >mRNA_D-mesarthrocarpus_Contig10126.1.1 ID=mRNA_D-mesarthrocarpus_Contig10126.1.1|Name=mRNA_D-mesarthrocarpus_Contig10126.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=948bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10126:123..4170- (Discosporangium mesarthrocarpum MT17_79)back to top |