mRNA_D-mesarthrocarpus_Contig10113.1.4 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Match: A0A6H5K9Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q8_9PHAE) HSP 1 Score: 312 bits (800), Expect = 1.260e-99 Identity = 171/349 (49.00%), Postives = 206/349 (59.03%), Query Frame = 1 Query: 319 MMDDLLRCFQGEFDNYNQVVADRSEGLNPGPGGGHEHFHCSLREVTSL-APPQITCTEGEGKSGN-----------------------EPVAVMAAKYYFNGDPSVVFRYRLYSFHAAEESSRG-RGPVEMRLWRLLPLVEQQLKAVDYHLAGFSWARAGAW----GPGEENAGGSR------EGCDVVERMQGCEIYWSRALEGEEGQASV-------GAEAGEXXXXXXXXXEEEVVCG----FLGLMGENDEGTWISSQNVPGLNILVKDDLRLWPGRLWVNDRGYDRHGDFVYGNQRGVPYKLEATDPDHPLGWTLGEEYRTPETYAEKMAAIGVTPGERFFPPL 1227 M+ +LL+ FQGEFDNY+QVVADR G+ PGPGGGHEH HCSL+++ P Q+ P+AV+AAKYYFNGD +VVFRYRLYSFHA ++ G RG MRLWRLLP VE +L+A Y L FSW+ + G +NA R G DVVERM GCEIYW R G E + S+ G + E+ G F+GLMG++D GTW+ SQNV GL ILVKDDLRLWP LWVNDRG+DR G+FVYGNQR VPYK+ PL WTLG +RT +TYAEKM+AIGVT G+R PP+ Sbjct: 58 MVSELLQLFQGEFDNYDQVVADRKAGMTPGPGGGHEHIHCSLKQLDPAEVPGQVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPLAVVAAKYYFNGDSNVVFRYRLYSFHACPPNTPGARGEAVMRLWRLLPHVEARLRANSYDLTSFSWSDDDSNQREPSRGSDNASNDRCSKEGRTGNDVVERMFGCEIYWGRHQAGGEDEKSMPGGISGPGKQDANGGAVPERGAGEDAAGGGGKSFVGLMGKDDSGTWVESQNVDGLEILVKDDLRLWPDSLWVNDRGFDRDGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAEKMSAIGVTLGQRLRPPV 406
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Match: D7G1T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T3_ECTSI) HSP 1 Score: 166 bits (419), Expect = 2.900e-46 Identity = 72/104 (69.23%), Postives = 84/104 (80.77%), Query Frame = 1 Query: 916 FLGLMGENDEGTWISSQNVPGLNILVKDDLRLWPGRLWVNDRGYDRHGDFVYGNQRGVPYKLEATDPDHPLGWTLGEEYRTPETYAEKMAAIGVTPGERFFPPL 1227 F+GLMGE+D GTW+ SQNV GL ILVKDDLRLWP RLWVNDRG+DR G+FVYGNQR VPYK+ PL WTLG +RT +TYAE+M+AIGVTPG+R PP+ Sbjct: 35 FVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAERMSAIGVTPGQRLGPPV 138
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Match: A0A2V3IVI5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVI5_9FLOR) HSP 1 Score: 166 bits (419), Expect = 4.010e-44 Identity = 100/291 (34.36%), Postives = 142/291 (48.80%), Query Frame = 1 Query: 310 AAEMMDDLLRCFQGEFDNYNQVVADRSEGLNPGPGGGHEHFHCSLREVTSLAPPQITCTEGEGKSGNEPVAVMAAKYYFNGDPSVVFRYRLYSFHAAEESSRGRGPVEMRLWRLLPLVEQQLKAVDYHLAGFSWARAGAWGPGEENAGGSREGCDVVERMQGCEIYWSR----ALEGEEGQASVGAEAGEXXXXXXXXXEEEVVCGFLGLMGENDEGTWISSQNVPGLNILVKDDLRLWPGRLWVNDRGYDRHGDFVYGNQRGVPYKLEATDPDHPLGWTLGEEYRTPETY 1170 A + ++ ++ F G+FDNY QV +RS+G+ P GGGHEH HCS+ ++ S ++ AKYYFNG+ VFR RLY +A ++S R G +EMR++R E+ LKA +Y + W R DV + MQGCE++W R A E +E +G E G F+G M G + S+ + G I V DDL L LWV DRG+D + F+YGN+ G+PYK++ WTL +E+ PE Y Sbjct: 92 AKDNLERFVQLFSGDFDNYEQVRLERSQGVYPREGGGHEHIHCSINQIAS--------------------DLLFAKYYFNGNSRQVFRSRLYQVNARDDSER--GVIEMRIFRFYEETERLLKAANYDIDAIQWDRN-----------------DVYDWMQGCEVFWERYVPPADEHDEACQVLGIEGGPR---------------FVGYM--KGGGCEVHSREI-GARIKVMDDLLLTSEDLWVADRGFDLNDHFIYGNRLGIPYKMKRVRRGSSAEWTLSKEHSPPEGY 325
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Match: K0TER5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER5_THAOC) HSP 1 Score: 162 bits (409), Expect = 4.990e-42 Identity = 114/337 (33.83%), Postives = 155/337 (45.99%), Query Frame = 1 Query: 307 TAAEMMDDLLRCFQGEFDNYNQVVADRSEGLNPGPGGGHEHFHCSLREVTSLAPPQITCTE-GEGKSGNEPVA--VMAAKYYFNGDPSVVFRYRLYSFHAAEESSR--GRGPVEMRLWRLLPLVEQQLKAVDYHLAGFSWARAGAWG--PGEENAGGSREGC-------DVVERMQGCEIYWSRALEGEEGQASVGAEAGEXXXXXXXXXEEEVVC--GFLGLMGENDEGTWISSQN-VPGLNILVKDDLRLWPGRLWVNDRGYDRHGD-----------FVYGNQRGVPYKLEATDP--------------DHPLGWTLGEEYRTPETYAEKMAAI 1191 ++ E L FQG+FDNYNQVV DR GL PG GGGHEH HC+L + C + G+ G+ + ++AA +YFNG+P +FR+R Y A + G V M+L L P++EQ L+ SW R AW GE+ + +V +QGC++ W E+ A+ + + + C F M G + S + +PG IL+KD+L LW + W+NDRGYD G+ FVYGN+RGVPYKLE L WTLG YRTP Y K+ AI Sbjct: 72 SSGEYFRRLTSTFQGDFDNYNQVVLDRQHGLTPGAGGGHEHIHCTL----------VPCPDFGDDAEGDTRRSRWILAA-FYFNGNPQQIFRFRAYQLWAPDHDGMDDGSAVVRMKLNTLSPILEQALRKRSEEPC--SWWRT-AWKVWSGEDKKKFHEDIIPWSQFIPSLVSPLQGCDVLWE-----EDWDAAKHSYLLDNAYNSDESNDITSFCDTSFHATMEAGSSGAIVDSISMIPGQRILIKDELSLWEDKFWINDRGYDPDGETDSMNENQDMPFVYGNRRGVPYKLERVSHIVSTAGAELQVAPVSGELQWTLGGSYRTPGEYEAKLKAI 389
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Match: A0A5J4Z4Z5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Z5_PORPP) HSP 1 Score: 159 bits (402), Expect = 3.270e-40 Identity = 96/279 (34.41%), Postives = 132/279 (47.31%), Query Frame = 1 Query: 310 AAEMMDDLLRCFQGEFDNYNQVVADRSEGLNPGPGGGHEHFHCSLREVTSLAPPQITCTEGEGKSGNEPVAVMAAKYYFNGDPSVVFRYRLYSFHAAEESSRGRGPVEMRLWRLLPLVEQQLKAVDYHLAGFSWARAGAWGPGEENAGGSREGCDVVERMQGCEIYWSRALEGEEGQASVGAEAGEXXXXXXXXXEEEVVCG---FLGLMGENDEGTWISSQNVPGLNILVKDDLRLWPGRLWVNDRGYDRHGDFVYGNQRGVPYKLEATDPDHPLGWT 1137 A +D + F+G+FDNY+QV+ ++ G G GGGHEH HC L + GE S ++ AKYYFNGDP+ V+R R+Y + S +G +EMR++R E +L+A Y + W G D+ E +QGCE++W R E+ + G F G M G + S + ILVKDDL L LWVNDRG+D +G FVYGN+RGVPYK++ T + L WT Sbjct: 257 AQRNLDLFMTSFEGDFDNYDQVLENKRLGFTEGEGGGHEHIHCKLSRI------------GENSS------MIFAKYYFNGDPNSVYRARVYEIFL--DDSDDKGVIEMRIYRFYAETEARLRACGYRINEIDWT-----------------GDDLYEWLQGCEVFWERRK-----------------FKTAQALEQSEIIGPFFFRGFMAGG--GCTVFSPTMKS-RILVKDDLILTGNELWVNDRGFDENGHFVYGNRRGVPYKMKRTSCNPHLEWT 478
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Match: B7G7Q1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Q1_PHATC) HSP 1 Score: 149 bits (376), Expect = 5.300e-38 Identity = 99/305 (32.46%), Postives = 141/305 (46.23%), Query Frame = 1 Query: 313 AEMMDDLLRCFQGEFDNYNQVVADRSEGLNPGPGGGHEHFHCSLREVTSLAPPQITCTEGEGKSGNEPVAVMAAKYYFNGDPSVVFRYRLYSFHAAEESSRGRGPVEMRLWRLLPLVEQQLKAVDYHLAGFSWARAGAWGPGEENAGGSREGCDVVERMQGCEIYWSRALEGEEGQASVGAEAGEXXXXXXXXXEEEVVCGFLGLMGENDEGTWISSQNVPGLNILVKDDLRLWPGRLWVNDRGYDRHG-DFVYGNQRGVPYKLEA----------TDPDHPLGWTLGEEYRTPETYAEKMAAIG 1194 A + LL FQG+FDNYNQV+ DR +GL P GGGHEH HCSL V+ A A +YF+G P +FR+R Y +ES+ ++ L L P +E++L+ +W E G V+ + C++ WS L+ + ++ +E G +M + + SQ +PG IL+KD L LWP LW++DRG+D F+YGNQRGVPY+LE T L WTLG ++R+ Y +KM A+G Sbjct: 60 ASVWKALLDRFQGDFDNYNQVIHDRKKGLLPREGGGHEHIHCSLVPVSETA--------------------RLAAFYFDGVPGAIFRFRFYDLIPVDEST-----IDTVLHTLHPELERRLRRCP---------DPSSWPLFFEEFGVKGR----VQLLPKCDVRWSWVLDPVQHDYAL----------------DEGPNGLHAVMVHGE--ALVESQMMPGQKILIKDQLSLWPDELWIHDRGFDPDTMRFIYGNQRGVPYRLERVTDIALNNGRTIVQEDLAWTLGPDFRSEGEYQDKMVAVG 308
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Match: A0A7S1XBU0_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XBU0_9RHOD) HSP 1 Score: 145 bits (367), Expect = 1.600e-36 Identity = 91/280 (32.50%), Postives = 135/280 (48.21%), Query Frame = 1 Query: 310 AAEMMDDLLRCFQGEFDNYNQVVADRSEGLNPGPGGGHEHFHCSLREVTSLAPPQITCTEGEGKSGNEPVAVMAAKYYFNGDPSVVFRYRLYSFHAAEESSRGRGPVEMRLWRLLPLVEQQLKAVDYHLAGFSWARAGAWGPGEENAGGSREGCDVVERMQGCEIYWSRA---LEGEEGQASVGAEAGEXXXXXXXXXEEEVVCGFLGLMGENDEGTWISSQNVPGLNILVKDDLRLWPGRLWVNDRGYDRHGDFVYGNQRGVPYKLEATDPDHPLGWTL 1140 A MD+ L F G+FDNY QV +R+ GL P GGGHEH HC L+ + S T G G + AKYYF+G+PS +FR RLY ++ S+ G +EMR++R E +L+ ++ + + D+ E ++GCE++W + +EG Q F+G M G + S+ + G+ I +KDDL + LWVNDRG+ +GD+VYGN+RG+ YK++ P L WT+ Sbjct: 105 ARRRMDEFLAWFSGDFDNYAQVAQERALGLFPREGGGHEHIHCQLQNLDS--------TLGNGH--------IFAKYYFDGNPSKIFRSRLYRVSISDSSASGE--LEMRIYRFYAETESRLREHNFDVTKVDLTKD-----------------DLYEWLEGCEVFWYKGDGNVEGLNHQPH-----------------------FIGYM--EGGGCSVFSREIQGM-IHIKDDLIMTQKDLWVNDRGFTDNGDYVYGNRRGIHYKMQRVLPGDELWWTV 323
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Match: A0A7S2PZJ6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PZJ6_9STRA) HSP 1 Score: 140 bits (353), Expect = 8.180e-34 Identity = 104/356 (29.21%), Postives = 150/356 (42.13%), Query Frame = 1 Query: 331 LLRCFQGEFDNYNQVVADRSEGLNPGPGGGHEHFHCSLREVTSLAPPQITCTEGEGKSGNEPVAVMAAKYYFNGDPSVVFRYRLYSFHAAEESSRGRGPVE-----MRLWRLLPLVEQQLKAVDYHLAGFSWARA--GAW----GPGEENAGGSR---------EGCD-VVERMQGCEIYWSRALEGEE-GQASVGAEAGEXXXXXXXXXEEEVVCGFLGLMGENDEGTWISSQN-VPGLNILVKDDLRLWPGRLWVNDRGYDRHG--------------------DFVYGNQRGVPYKLEA--------------------------TDPDHPLGWTLGEEYRTPETYAEKMAAI 1191 LL FQG+FDNY+QV+ DR+ L P GGGHEH HC+L P T E + N+ + A +YFNG+P +FR+R+Y + ++ ++ M+L L +EQQL+ Y +W R W GE + +R EG +V + GC++ W + ++ +V + + V G M G + S + +PG IL+KD+L LW W+NDRGYD FVYGN+RGVPYKLE T L WTLG+++R Y EK+ A+ Sbjct: 63 LLSQFQGDFDNYHQVIRDRNHALAPADGGGHEHIHCTL------VPCPHTAVTQEQRQNNDQWILAA--FYFNGNPRQIFRFRMYKLISPQDDDSNSNNIDGEKVRMKLHTLSSELEQQLR--QYSDQPCTWWRETYDVWLNSINEGENESDDNRSNEWNTFRSEGIQHLVSPLVGCDVLWDPQWDPKKHAYLNVDEYGNDTSSSPTTINKNNNVDGCHATMEAGSAGAIVDSISLIPGKRILIKDELSLWEDEFWINDRGYDPDAVVDDNDGGGNDENEDGVGNMPFVYGNRRGVPYKLERVSCISTENTNEGSDDMSSAPPLLLERTIHKQELAWTLGDDFREQTEYEEKLRAV 408
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Match: A0A1E7FNR9_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNR9_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.230e-28 Identity = 103/360 (28.61%), Postives = 149/360 (41.39%), Query Frame = 1 Query: 256 CMTGVSVQGVAGAKSASTAAEMMDDLLRCFQGEFDNYNQVVADRSEGLNPGPGGGHEHFHCSLREVTSLAPPQITCTEGEGKSGNEPVAVMAAKYYFNGDPSVVFRYRLYSF------HAAEESSRGRGPVEMRLWRLLPLVEQQLKAVDYHLAGFSWAR----------AGAWGPGEENAGGSREGCDVVERMQGCEIYWSRALEGEEGQASVGAEAGEXXXXXXXXXEEEVVCGFLGLMGENDEGTWISSQNVPGLNILVKDDLRLWPGRLWVNDRGYDR-HGDFVYGNQRGVPYKLEATDPDHP------------------------------LGWTLGEEYRTPETYAEKMAAIG 1194 C + SV GV S+ ++ L FQG+FDNY QVV DR GL P GGGHEHFHC+L VT + A ++F+G+P+ +FR+R Y + + VEMRL L P +EQ LK+ + SW + S E V + CEI WS + + + + ++ G+ +E +M ++ ++S VPG+ I + D L L+ ++NDRG+D G F+YGNQR +PY+LE P L WT+G +YRT E Y K+ IG Sbjct: 71 CESTSSVDGVGDGDGESSHEKVTKILSEWFQGDFDNYAQVVEDRKNGLLPREGGGHEHFHCTLVPVTE--------------------STRLAAFFFDGNPNRIFRFRYYELLTPTIINDVDHQHSNNVTVEMRLNTLHPELEQLLKS--HSTDPLSWPDIFKNFQHEGVSSNSSXXXXXXXXSDEKNQKVIPLSKCEIVWSFDKDPIQ-HSYISSDDGKD--------DEAENMSLHAVMVHGEQV--VNSTIVPGMQIRILDQLSLYQHVFYINDRGFDPITGAFIYGNQRDIPYRLERVSNILPSATSAADXXXXXXSTADRRERLQLEVINPELEWTIGPKYRTIEEYDSKLKVIG 397
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Match: A0A7S4N064_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N064_9STRA) HSP 1 Score: 122 bits (307), Expect = 1.040e-27 Identity = 96/347 (27.67%), Postives = 141/347 (40.63%), Query Frame = 1 Query: 316 EMMDDLLRCFQGEFDNYNQVVADRSEGLNPGPGGGHEHFHCSL-----REVTSLAPPQITCTEGEGKSGNEPVAVMAAKYYFNGDPSVVFRYRLYSFHAAEESSRGRGP---------VEMRLWRLLPLVEQQLKAVDYHLAGFSWARAGAWGPGEENAGGSREGCDVVER------MQGCEIYWSRALEGEEGQASVGAEAGEXXXXXXXXXEEEVVCGFLGLMGENDEGTWISSQNVPGLNILVKDDLRLWPGRLWVNDRGY----DR--------HGDFVYGNQRGVPYKLEATDP----------------------DHPLGWTLGEEYRTPETYAEKMAAIG 1194 E L+ QG+FDNY QV DRSEG+ P GGGHE HC++ R + +L GEG+ G AV++A +YF+G P +FR+R+Y+ + MRL+ L P VE L+A + A + + N G R ++GC++ W+ E + + ++G + S PG + V+D+L LW LW+NDRG+ DR D+VYGN+RGVPY +E D L WT+G +R + Y E+M A+G Sbjct: 29 EFFRTLVSRLQGDFDNYRQVERDRSEGMLPREGGGHEWMHCTVVPVEGRALEALNGAIAAPRGGEGE-GEADAAVLSA-FYFDGVPERIFRFRMYALNYCRGGDXXXXXXXXXXXGESARMRLYTLGPSVEGPLRAAPDAPERWGGALMASLLREDGNEEGXXXXXXXXPRPPPFRLLEGCDVLWTPTPHR------------TRHAYAARNRPERALHAVM-----TNDGAVVPSVMKPGTYLRVRDELSLWEDELWINDRGFAPECDRTDDPGNIGEDDWVYGNRRGVPYAMERAARFSTVDGDGGDDDDDAVFAREVVDAALAWTMGSSWRDEDEYCERMEAVG 356 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10113.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10113.1.4 >prot_D-mesarthrocarpus_Contig10113.1.4 ID=prot_D-mesarthrocarpus_Contig10113.1.4|Name=mRNA_D-mesarthrocarpus_Contig10113.1.4|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=360bp MPLNGSTPRKHRLPEEGSAYVRCPTMCMTGVSVQGVAGAKSASTAAEMMDback to top mRNA from alignment at D-mesarthrocarpus_Contig10113:240..2015- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10113.1.4 ID=mRNA_D-mesarthrocarpus_Contig10113.1.4|Name=mRNA_D-mesarthrocarpus_Contig10113.1.4|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1776bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10113:240..2015- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10113:240..2015- >mRNA_D-mesarthrocarpus_Contig10113.1.4 ID=mRNA_D-mesarthrocarpus_Contig10113.1.4|Name=mRNA_D-mesarthrocarpus_Contig10113.1.4|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1080bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10113:240..2015- (Discosporangium mesarthrocarpum MT17_79)back to top |