mRNA_D-mesarthrocarpus_Contig10110.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Match: D8LEF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF6_ECTSI) HSP 1 Score: 114 bits (284), Expect = 1.820e-31 Identity = 51/72 (70.83%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 1 LGKDWQQSVVLATGSAEGNIHLFDLSKWQGEEMQVLRGHTDRVYSVDFHPVDPKLVSCSADRTVRIWAPMRR 216 LG DWQ S+VLATGSA+G+IH+FDLSK QG+E+Q L GH DRVYS DFHP +PKLVS SAD+TV IW P R+ Sbjct: 6 LGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLLGHRDRVYSADFHPTEPKLVSSSADKTVLIWEPNRK 77
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.050e-28 Identity = 52/72 (72.22%), Postives = 61/72 (84.72%), Query Frame = 1 Query: 1 LGKDWQQSVVLATGSAEGNIHLFDLSKWQGEEMQVLRGHTDRVYSVDFHPVDPKLVSCSADRTVRIWAPMRR 216 LG DWQ S+VLATGSA+G+IH+FDLSK QG+E+Q LRGH DRVYS DFHP +PKLVS SAD+TV IW P R+ Sbjct: 525 LGNDWQHSLVLATGSADGSIHVFDLSKGQGDEIQTLRGHRDRVYSTDFHPTEPKLVSSSADKTVLIWEPNRK 596
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Match: A0A835Z281_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z281_9STRA) HSP 1 Score: 106 bits (264), Expect = 6.390e-28 Identity = 46/70 (65.71%), Postives = 58/70 (82.86%), Query Frame = 1 Query: 4 GKDWQQSVVLATGSAEGNIHLFDLSKWQGEEMQVLRGHTDRVYSVDFHPVDPKLVSCSADRTVRIWAPMR 213 GKDW S+VLATGSA+GNI+ FD+SK +G ++Q LRGH DRVY+V FHP +P+LVS SAD+TVRIW P + Sbjct: 47 GKDWAHSLVLATGSADGNIYTFDMSKGEGGDLQTLRGHNDRVYAVHFHPTEPRLVSGSADQTVRIWGPSK 116
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Match: F4PVF4_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PVF4_CAVFA) HSP 1 Score: 89.0 bits (219), Expect = 6.700e-19 Identity = 42/72 (58.33%), Postives = 54/72 (75.00%), Query Frame = 1 Query: 7 KDWQQSVVLATGSAEGNIHLFDL--SKWQGEEMQVLRGHTDRVYSVDFHPVDPKLVSCSADRTVRIWAPMRR 216 +D QSV+LATGSA+ N +LFD+ SK G +Q L GHTDRVYSV FHP +P L SCSAD T+R+W+P ++ Sbjct: 474 EDINQSVLLATGSADYNAYLFDIGFSKQSGRLLQKLEGHTDRVYSVKFHPSEPILASCSADSTIRLWSPKKK 545
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Match: UPI000644D057 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644D057) HSP 1 Score: 88.6 bits (218), Expect = 9.180e-19 Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 1 Query: 10 DWQQSVVLATGSAEGNIHLFDL--SKWQGEEMQVLRGHTDRVYSVDFHPVDPKLVSCSADRTVRIWAPMRR 216 D QSV+LATGSA+ N +L+D+ SK G MQ L GHTDRVYSV FHP +P L SCSAD T+R+W P ++ Sbjct: 476 DINQSVLLATGSADYNAYLYDIGFSKQSGRVMQKLEGHTDRVYSVKFHPSEPILASCSADSTIRLWTPKKK 546
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Match: F0ZUB1_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZUB1_DICPU) HSP 1 Score: 88.2 bits (217), Expect = 1.210e-18 Identity = 43/75 (57.33%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 10 DWQQSVVLATGSAEGNIHLFD--LSKWQGEEMQVLRGHTDRVYSVDFHPVDPKLVSCSADRTVRIWAPMRRHPNN 228 D QSV+LATGSA+ + ++FD LSK G+ +Q L GHTDRVYSV FHP +P L SCSAD T+R W P ++ NN Sbjct: 438 DINQSVLLATGSADYSAYIFDIGLSKQSGKVIQKLEGHTDRVYSVKFHPSEPILASCSADNTIRFWTPKKKIFNN 512
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Match: D3BUW8_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BUW8_POLPP) HSP 1 Score: 87.8 bits (216), Expect = 1.740e-18 Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 1 Query: 10 DWQQSVVLATGSAEGNIHLFDL--SKWQGEEMQVLRGHTDRVYSVDFHPVDPKLVSCSADRTVRIWAPMRR 216 D QSV+LATGSA+ N +LFD+ +K G+ +Q L GHTDRVYSV FHP +P L SCSAD T+R+W P ++ Sbjct: 503 DINQSVLLATGSADYNAYLFDIGFTKQSGKVLQKLEGHTDRVYSVKFHPSEPILASCSADSTIRLWTPKKK 573
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Match: A0A8J4PPE8_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PPE8_9MYCE) HSP 1 Score: 87.4 bits (215), Expect = 2.290e-18 Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 1 Query: 1 LGKDWQQSVVLATGSAEGNIHLFD--LSKWQGEEMQVLRGHTDRVYSVDFHPVDPKLVSCSADRTVRIWAPMRR 216 + D QSV+LATGS++ N ++FD LSK G +Q L GHTDRVYSV FHP +P L SCSAD T+R+W P ++ Sbjct: 444 ITNDINQSVLLATGSSDYNAYIFDIGLSKQSGRLLQKLEGHTDRVYSVKFHPSEPILASCSADSTIRLWTPKKK 517
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Match: Q54IS3_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54IS3_DICDI) HSP 1 Score: 87.0 bits (214), Expect = 3.210e-18 Identity = 41/75 (54.67%), Postives = 53/75 (70.67%), Query Frame = 1 Query: 10 DWQQSVVLATGSAEGNIHLFDLS--KWQGEEMQVLRGHTDRVYSVDFHPVDPKLVSCSADRTVRIWAPMRRHPNN 228 D QSV+LATGSA+ N +++D+ K G+ +Q L GHTDRVYSV FHP +P L SCSAD T+R W P ++ NN Sbjct: 475 DINQSVLLATGSADYNAYIYDIGFGKQSGKVLQKLEGHTDRVYSVKFHPSEPILASCSADNTIRFWTPKKKIFNN 549
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Match: A0A8H7Q4N1_MORIS (GED domain-containing protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q4N1_MORIS) HSP 1 Score: 78.6 bits (192), Expect = 3.020e-15 Identity = 32/64 (50.00%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 16 QQSVVLATGSAEGNIHLFDLSKWQGEEMQVLRGHTDRVYSVDFHPVDPKLVSCSADRTVRIWAP 207 ++SV+LATGS++ ++L+++ + E MQ L GHTDRVY+ +FHP +P L SCSAD T+++W P Sbjct: 422 EKSVLLATGSSDPYVYLYNIGENTAELMQRLEGHTDRVYAANFHPTEPILASCSADYTIKVWGP 485 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10110.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10110.2.1 >prot_D-mesarthrocarpus_Contig10110.2.1 ID=prot_D-mesarthrocarpus_Contig10110.2.1|Name=mRNA_D-mesarthrocarpus_Contig10110.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=79bp LGKDWQQSVVLATGSAEGNIHLFDLSKWQGEEMQVLRGHTDRVYSVDFHPback to top mRNA from alignment at D-mesarthrocarpus_Contig10110:2614..3127+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10110.2.1 ID=mRNA_D-mesarthrocarpus_Contig10110.2.1|Name=mRNA_D-mesarthrocarpus_Contig10110.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=514bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10110:2614..3127+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10110:2614..3127+ >mRNA_D-mesarthrocarpus_Contig10110.2.1 ID=mRNA_D-mesarthrocarpus_Contig10110.2.1|Name=mRNA_D-mesarthrocarpus_Contig10110.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=237bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10110:2614..3127+ (Discosporangium mesarthrocarpum MT17_79)back to top |