mRNA_D-mesarthrocarpus_Contig10110.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10110.1.1 vs. uniprot
Match: A0A6H5KNQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ7_9PHAE) HSP 1 Score: 174 bits (441), Expect = 8.170e-49 Identity = 80/111 (72.07%), Postives = 93/111 (83.78%), Query Frame = 1 Query: 1 STSKCIYTLDSRDPRGVVGTWRCNSFVNSLHVFSNGTKVISADAGGNIITWDSRRGVRVDCYTLEDCIHISHIQASPPDAGRPDEEGQLLAANCFDNTLRVFHRKGTDTPP 333
STSK IYT+D+RDP GVV W C +FVNSLHV+S+G+KV+SADA G I+TWD+R G VD Y+LED IHISHIQASPPDAGR DEEG LLAANCFDNTLRVFHR+ ++ P
Sbjct: 278 STSKKIYTVDTRDPMGVVAKWNCGAFVNSLHVYSDGSKVVSADASGKILTWDTRTGGVVDSYSLEDPIHISHIQASPPDAGRQDEEGLLLAANCFDNTLRVFHRRFLNSRP 388
BLAST of mRNA_D-mesarthrocarpus_Contig10110.1.1 vs. uniprot
Match: A0A5D6XXH4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXH4_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.290e-15 Identity = 49/109 (44.95%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 4 TSK-CIYTLDSRDPRGVVGTWRCNSFVNSLHVFSNGTKVISADAGGNIITWDSRRGVRVDCYT-LEDCIH--ISHIQASPP-DAGRPDEEGQLLAANCFDNTLRVFHRK 315
TSK CI+ +DSR VV +W+ ++ VNSL+V +G +++ D+ G + TWD R +D + L D ISHI ASPP D R DE+G+ LAAN +DN LRV+ R+
Sbjct: 199 TSKSCIHQVDSR--ADVVRSWQNDAMVNSLYVSPDGQFIVTGDSKGMLKTWDVRMDACIDDISKLNDPGRHAISHIHASPPVDGRRGDEDGRFLAANSYDNLLRVYDRR 305
BLAST of mRNA_D-mesarthrocarpus_Contig10110.1.1 vs. uniprot
Match: A0A2D4BDQ6_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BDQ6_PYTIN) HSP 1 Score: 77.0 bits (188), Expect = 9.960e-14 Identity = 51/118 (43.22%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 4 TSK-CIYTLDSRDPRGVVGTWRCNSFVNSLHVFSNGTKVISADAGGNIITWDSRRGVRVDCYTLEDCIH------------ISHIQASPPDAGRP-DEEGQLLAANCFDNTLRVFHRK 315
TSK I+ +DSR V W+ N+ VNSL+V +G VI+ D+ G I TWD R +E CI ISHI ASPP GR DE+G+ LAAN +DN LRV+ R+
Sbjct: 214 TSKNAIHMMDSRAE--VCRKWQNNAMVNSLYVSPDGQFVITGDSRGMIKTWDVR---------MESCIEDISRQNDPGNHAISHIHASPPVDGRSGDEDGRFLAANSYDNILRVYDRR 320
BLAST of mRNA_D-mesarthrocarpus_Contig10110.1.1 vs. uniprot
Match: A0A8K1CHV1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHV1_PYTOL) HSP 1 Score: 72.4 bits (176), Expect = 4.170e-12 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 58 TWRCNSFVNSLHVFSNGTKVISADAGGNIITWDSRRGVRVDCYTLEDCIH---ISHIQASPPDAGRP-DEEGQLLAANCFDNTLRVFHRK 315
TW+ ++ VNSL+V +G V++ D+ G I TWD R ++ + E+ ISHI ASPP GR DE+G+ LAAN +DN LRV+ R+
Sbjct: 241 TWQNDAMVNSLYVSPDGQFVVTGDSKGMIKTWDVRMESCIEDISRENDPGRHAISHIHASPPVDGRGGDEDGRFLAANSYDNILRVYDRR 330
BLAST of mRNA_D-mesarthrocarpus_Contig10110.1.1 vs. uniprot
Match: A0A507DQL7_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DQL7_9FUNG) HSP 1 Score: 65.9 bits (159), Expect = 8.090e-10 Identity = 40/121 (33.06%), Postives = 59/121 (48.76%), Query Frame = 1 Query: 1 STSKCIYTLDSRDPRGVVGTWRCNSFVNSLHVFSNGTKVISADAGGNIITWDSRRGVRVDCYTLEDCIH-ISHIQASPPDAGR----------------PDEEGQLLAANCFDNTLRVFHR 312
++ + +D R P + T + VNSL+V+ + T V+SADA G + TWD R G V+ + E ISH+ S D G PDEE + +A N +DN +RV+ R
Sbjct: 230 TSRNALCMVDRRQPDTAL-TLENEAMVNSLYVYRDATYVLSADAAGQLKTWDVRTGKCVNAFANEPTKKPISHVTVSYNDGGNFSTLTAKLFCMSVSVDPDEEPRYMAVNSYDNVMRVYDR 349
BLAST of mRNA_D-mesarthrocarpus_Contig10110.1.1 vs. uniprot
Match: M2X2M9_GALSU (Transducin family protein / WD-40 repeat family protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X2M9_GALSU) HSP 1 Score: 60.8 bits (146), Expect = 4.360e-8 Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 1 Query: 16 IYTLDSRDPRGV-VGTWRCNSFVNSLHVFSNGTKVISADAGGNIITWDSRRGVRVDCYTLEDCIHISHIQASPPDAGRPDEEGQLLAANCFDNTLRVFHRKG 318
I+ LD R + V T C+ VNS++V +G V S D G I WD R + ISH++ S P R +EEGQ LA N FDNT+RV+ R G
Sbjct: 232 IHMLDRRTQKSTNVITNDCS--VNSIYVHYDGILVTSGDHRGYIKRWDMRYFSKPLEVFYNSKRPISHLEVSRP---REEEEGQYLAVNAFDNTIRVYDRGG 328 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10110.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10110.1.1 >prot_D-mesarthrocarpus_Contig10110.1.1 ID=prot_D-mesarthrocarpus_Contig10110.1.1|Name=mRNA_D-mesarthrocarpus_Contig10110.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=142bp STSKCIYTLDSRDPRGVVGTWRCNSFVNSLHVFSNGTKVISADAGGNIITback to top mRNA from alignment at D-mesarthrocarpus_Contig10110:416..1763+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10110.1.1 ID=mRNA_D-mesarthrocarpus_Contig10110.1.1|Name=mRNA_D-mesarthrocarpus_Contig10110.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1348bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10110:416..1763+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10110:416..1763+ >mRNA_D-mesarthrocarpus_Contig10110.1.1 ID=mRNA_D-mesarthrocarpus_Contig10110.1.1|Name=mRNA_D-mesarthrocarpus_Contig10110.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=426bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10110:416..1763+ (Discosporangium mesarthrocarpum MT17_79)back to top |