mRNA_D-mesarthrocarpus_Contig1011.3.4 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Match: D7G8R1_ECTSI (Macro domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8R1_ECTSI) HSP 1 Score: 185 bits (470), Expect = 1.630e-50 Identity = 91/153 (59.48%), Postives = 116/153 (75.82%), Query Frame = 3 Query: 228 MFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEVKH-IHTAGPVYHSLESSEPLLRNSYKNSLLLGRQHGVKTIAFPAISCGVYCFPLKPAAEVAVATVSKFSEGFDLVEFVLFGEDTFHPFLAAAKQVLPSLSRES 683 M GGGGVDGAIHRAAG+ L +AC + N +RCPTGEARITPGF L K IHT GPVY + E S PLLR++ KNSLLL +++GVK++AFPAISCGVY +P AAE+A+ T+ +FSEG DL+EFVLFG+DT++PF+ A + L + +S Sbjct: 76 MLGGGGVDGAIHRAAGRDLLKACYDVEPNSEDIRCPTGEARITPGFRLPAKFVIHTVGPVYENKEVSAPLLRSAIKNSLLLCKENGVKSVAFPAISCGVYGYPAGEAAEIAIDTMLEFSEGIDLIEFVLFGKDTYNPFMKKASEKLAVVKEDS 228
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Match: A0A843W5G1_COLES (Macro domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843W5G1_COLES) HSP 1 Score: 170 bits (431), Expect = 2.260e-47 Identity = 91/192 (47.40%), Postives = 126/192 (65.62%), Query Frame = 3 Query: 93 MDCQKDDNEVQFTAWLCSRGPCSYDGSSRALLIPTDCFHPLVIWQMFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEVKH-IHTAGPVYHSLESSEPLLRNSYKNSLLLGRQHGVKTIAFPAISCGVYCFPLKPAAEVAVATVSKFSEGFDLVEFVLFGEDTFHPFLAAAKQVLP 665 +D +K D T W S DGS+ A++ + +M GGGGVDGAIHRAAG +L ACR +P GVRCPTGEARITP F L V + IHT GP+Y + + E LRN+Y+NSL L +++G+ IAFPAISCGVY +P + A+++A++ V +FS+ F V FVLF +DT++ +L A+++LP Sbjct: 46 LDIRKGD----ITVW-------SVDGSTDAIVNAAN-------ERMLGGGGVDGAIHRAAGPELVAACRAVPEVRPGVRCPTGEARITPAFRLPVSYVIHTVGPIYDTDKQPEVSLRNAYRNSLRLAKENGIMYIAFPAISCGVYRYPYEAASKIAISAVKEFSDDFKEVHFVLFSDDTYNAWLDTARELLP 219
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Match: A0A6V7QFC2_ANACO (Macro domain-containing protein n=4 Tax=Ananas comosus TaxID=4615 RepID=A0A6V7QFC2_ANACO) HSP 1 Score: 169 bits (427), Expect = 3.450e-46 Identity = 92/205 (44.88%), Postives = 129/205 (62.93%), Query Frame = 3 Query: 51 GECMRRTELHGGLEMDCQKDDNEVQFTAWLCSRGPCSYDGSSRALLIPTDCFHPLVIWQMFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEVKH-IHTAGPVYHSLESSEPLLRNSYKNSLLLGRQHGVKTIAFPAISCGVYCFPLKPAAEVAVATVSKFSEGFDLVEFVLFGEDTFHPFLAAAKQVL 662 G+ + +L + QK D T W S DGS+ A++ + +M GGGGVDGAIHRAAG +L AC +P + GVRCPTGEARITP F L V H IHT GP+Y+S + E L N+Y+NSL L +++ ++ IAFPAISCGVY +PLK A++VA++TV +FS+ F V FVLF ++ ++ + A+++L Sbjct: 80 GDAVESFQLSPSSVLKIQKGD----ITVW-------SVDGSTDAIVNAAN-------ERMLGGGGVDGAIHRAAGPELLAACEEVPEVKPGVRCPTGEARITPAFRLPVSHVIHTVGPIYYSNKQPEVSLSNAYRNSLRLAKENNIQYIAFPAISCGVYGYPLKEASKVAISTVKEFSDDFKEVHFVLFSDEIYNVWAETARELL 266
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Match: UPI00053F65AC (uncharacterized protein LOC104887643 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F65AC) HSP 1 Score: 167 bits (423), Expect = 7.400e-46 Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 3 Query: 66 RTELHGGLEMDCQKDDNEVQFTAWLCSRGPCSYDGSSRALLIPTDCFHPLVIWQMFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEVKH-IHTAGPVYHSLESSEPLLRNSYKNSLLLGRQHGVKTIAFPAISCGVYCFPLKPAAEVAVATVSKFSEGFDLVEFVLFGEDTFHPFLAAAKQVL 662 + L + QK D T W S DGSS A++ + +M GGGGVDGAIHRAAG +L AC +P GVRCPTGEARITPGF L H IHT GP+Y +++ E LL+N+Y+NSL++ +++ ++ IAFPAISCGVY +P AA +AV+TV +F+ F V FVLF +D ++ +L AK ++ Sbjct: 62 KLALSPSSSLKIQKGD----ITQW-------SIDGSSDAIVNAAN-------ERMLGGGGVDGAIHRAAGPELKEACYKVPEVRPGVRCPTGEARITPGFRLPASHVIHTVGPIYDVVQNPEVLLKNAYRNSLMVAKENNIQYIAFPAISCGVYGYPFDEAATIAVSTVEEFANDFKEVSFVLFSDDIYNVWLDKAKAIV 243
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Match: A0A2K1Y3D6_POPTR (Macro domain-containing protein n=3 Tax=Populus TaxID=3689 RepID=A0A2K1Y3D6_POPTR) HSP 1 Score: 166 bits (419), Expect = 5.210e-45 Identity = 94/202 (46.53%), Postives = 125/202 (61.88%), Query Frame = 3 Query: 81 GGLEMDCQKDDNEVQFTAWLC----SRGPC---SYDGSSRALLIPTDCFHPLVIWQMFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEV-KHIHTAGPVYHSLESSEPLLRNSYKNSLLLGRQHGVKTIAFPAISCGVYCFPLKPAAEVAVATVSKFSEGFDLVEFVLFGEDTFHPFLAAAKQVL 662 G + C N F C S+G S DGSS A++ P + +M GGGG DGAIHRAAG QL AC T+P GVRCPTGEARITPGF L + IHT GP+Y + E LRN+Y+NSL+L + + +K IAFPAISCGVY +P + AA+VA++TV +F++ V FVLF ++ ++ +L AK++L Sbjct: 70 GVSTLPCDNGGNTNVFAMSPCLLKISKGDITKWSVDGSSDAIVNPAN-------ERMLGGGGADGAIHRAAGPQLRDACYTVPEVRPGVRCPTGEARITPGFNLPAFRVIHTVGPIYDVDGNPEASLRNAYRNSLILAKDNNIKYIAFPAISCGVYGYPYEEAAKVAISTVKEFADDLKEVHFVLFSDEIYNVWLEKAKELL 264
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Match: A0A7C8YWG7_OPUST (RNA-directed RNA polymerase n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YWG7_OPUST) HSP 1 Score: 166 bits (419), Expect = 6.160e-45 Identity = 85/169 (50.30%), Postives = 115/169 (68.05%), Query Frame = 3 Query: 159 SYDGSSRALLIPTDCFHPLVIWQMFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEVKH-IHTAGPVYHSLESSEPLLRNSYKNSLLLGRQHGVKTIAFPAISCGVYCFPLKPAAEVAVATVSKFSEGFDLVEFVLFGEDTFHPFLAAAKQVL 662 S DGSS A++ + +M GGGGVDGAIHRAAG +L AC +P GVRCPTGEARITPGF L H IHT GP+Y ++ E LRN+YKNSL L +++ ++ IAFPAISCGVY +P AA+VA++TV +F+ F + FVLF +D ++ ++ AK+++ Sbjct: 109 SIDGSSDAIVNAAN-------ERMLGGGGVDGAIHRAAGPELKEACAKVPEVRPGVRCPTGEARITPGFRLPAAHVIHTVGPIYDGDKNPEESLRNAYKNSLRLAKENNIQYIAFPAISCGVYGYPYDEAAKVAISTVKEFANDFKEIHFVLFSDDIYNVWVEKAKEIV 270
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Match: A0A0K9RZA3_SPIOL (Macro domain-containing protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RZA3_SPIOL) HSP 1 Score: 164 bits (416), Expect = 9.460e-45 Identity = 89/190 (46.84%), Postives = 117/190 (61.58%), Query Frame = 3 Query: 87 LEMDCQKDDNEVQFTAWLCSRGPCSYDGSSRALLIPTDCFHPLVIWQMFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEVKH-IHTAGPVYHSLESSEPLLRNSYKNSLLLGRQHGVKTIAFPAISCGVYCFPLKPAAEVAVATVSKFSEGFDLVEFVLFGEDTFHPFLAAAK 653 L C+ + T W S DGSS A++ + +M GGGGVDGAIHRAAG +L AC +P + GVRCPTGEARITPGF L H IHT GP+Y +S E L+N+Y+NSL++ ++ ++ IAFPAISCGVY +P AA VA++TV +F+ G V FVLF +D + +L AK Sbjct: 71 LSSSCRLKIQKGDITQW-------SVDGSSDAIVNAAN-------ERMLGGGGVDGAIHRAAGPELKEACYKVPEDRPGVRCPTGEARITPGFRLAASHVIHTVGPIYDVDKSPEASLKNAYRNSLVVAKEKNIQYIAFPAISCGVYGYPYDKAASVAISTVKEFANGLKEVYFVLFSDDIYDVWLEKAK 246
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Match: A0A803MJP1_CHEQI (Macro domain-containing protein n=2 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MJP1_CHEQI) HSP 1 Score: 164 bits (415), Expect = 1.090e-44 Identity = 90/201 (44.78%), Postives = 124/201 (61.69%), Query Frame = 3 Query: 63 RRTELHGGLEMDCQKDDNEVQFTAWLCSRGPCSYDGSSRALLIPTDCFHPLVIWQMFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEVKH-IHTAGPVYHSLESSEPLLRNSYKNSLLLGRQHGVKTIAFPAISCGVYCFPLKPAAEVAVATVSKFSEGFDLVEFVLFGEDTFHPFLAAAKQVL 662 R L + Q+ D T W S DGSS A++ + +M GGGGVDGAIHRAAG +L +AC +P GVRCPTGEARITPGF L H IHT GP+Y ++ E LL+N+YKNSLL+ +++ ++ IAFPAISCGVY +P AA +A++TV +F+ F V F+LF +D ++ +L A+ ++ Sbjct: 60 REFALSSSSRLKIQQGD----ITQW-------SVDGSSDAIVNAAN-------ERMLGGGGVDGAIHRAAGTELKKACYKVPEVRPGVRCPTGEARITPGFRLPAAHVIHTVGPIYDVDKNPEALLKNAYKNSLLVAKENNIQYIAFPAISCGVYRYPYDEAANIAISTVKEFANDFKEVYFILFSDDIYNVWLEKAEALV 242
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Match: A0A5C7GZP7_9ROSI (Macro domain-containing protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7GZP7_9ROSI) HSP 1 Score: 162 bits (411), Expect = 1.200e-44 Identity = 84/167 (50.30%), Postives = 112/167 (67.07%), Query Frame = 3 Query: 165 DGSSRALLIPTDCFHPLVIWQMFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEVKH-IHTAGPVYHSLESSEPLLRNSYKNSLLLGRQHGVKTIAFPAISCGVYCFPLKPAAEVAVATVSKFSEGFDLVEFVLFGEDTFHPFLAAAKQVL 662 +GSS A++ P + +M GGGG DGAIHRAAG QL AC +P GVRCPTGEARITPGF L H IHT GP+Y + LLR+SYKNSL + +++ ++ IAFPAISCGV+ +P + AA VA++T+ +F+ F V FVLF +D + +L AK++L Sbjct: 38 NGSSDAIVNPAN-------ERMLGGGGADGAIHRAAGPQLREACYKVPEVRSGVRCPTGEARITPGFKLPASHVIHTVGPIYDVHSNPAALLRSSYKNSLSVAKENNIQYIAFPAISCGVFGYPFEEAATVAISTIKEFANDFKEVHFVLFADDIYSVWLKKAKELL 197
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Match: A0A0A9DPJ4_ARUDO (Macro domain-containing protein n=2 Tax=PACMAD clade TaxID=147370 RepID=A0A0A9DPJ4_ARUDO) HSP 1 Score: 162 bits (409), Expect = 2.300e-44 Identity = 91/210 (43.33%), Postives = 125/210 (59.52%), Query Frame = 3 Query: 51 GECMRRTELHGGLEMDCQKDDNEVQFTAWLCSRGPCSYDGSSRALLIPTDCFHPLVIWQMFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEVKH-IHTAGPVYHSLESSEPLLRNSYKNSLLLGRQHGVKTIAFPAISCGVYCFPLKPAAEVAVATVSKFSEGFDLVEFVLFGEDTFHPFLAAAKQVLPSLSR 677 GE R + G + K D T W S DG++ A++ + +M GGGGVDGAIHRAAG +L +ACR +P GVRCPTGEARITP F L V IHT GP+Y + E L+ +Y+NSL L +++G++ IAFPAISCGVY +P K A+E+AV+T +FSE V FVLF +D ++ + A+++L + Sbjct: 9 GEAFRLSAAPGAGALKLHKGD----ITLW-------SVDGATDAIVNAAN-------ERMLGGGGVDGAIHRAAGPELAQACRKVPEVRPGVRCPTGEARITPAFKLPVSRVIHTVGPIYDMDKHPEVSLKKAYENSLKLAKENGIQYIAFPAISCGVYRYPPKEASEIAVSTAQQFSEVMKEVHFVLFSDDLYNVWHETAQEMLSQFGK 200 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1011.3.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1011.3.4 >prot_D-mesarthrocarpus_Contig1011.3.4 ID=prot_D-mesarthrocarpus_Contig1011.3.4|Name=mRNA_D-mesarthrocarpus_Contig1011.3.4|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=223bp MFGGGGVDGAIHRAAGKQLGRACRTLPSNEYGVRCPTGEARITPGFLLEVback to top mRNA from alignment at D-mesarthrocarpus_Contig1011:11830..15455+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1011.3.4 ID=mRNA_D-mesarthrocarpus_Contig1011.3.4|Name=mRNA_D-mesarthrocarpus_Contig1011.3.4|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3626bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1011:11830..15455+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1011:11830..15455+ >mRNA_D-mesarthrocarpus_Contig1011.3.4 ID=mRNA_D-mesarthrocarpus_Contig1011.3.4|Name=mRNA_D-mesarthrocarpus_Contig1011.3.4|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=669bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1011:11830..15455+ (Discosporangium mesarthrocarpum MT17_79)back to top |