mRNA_D-mesarthrocarpus_Contig10107.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10107.2.1 vs. uniprot
Match: D8LKZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKZ0_ECTSI) HSP 1 Score: 106 bits (265), Expect = 1.480e-26 Identity = 53/98 (54.08%), Postives = 64/98 (65.31%), Query Frame = 1 Query: 1 KQILFMCKTHFLSVSPDTRDGWKQYRGQRTFPESKVATGCRPGPDRILGPGG------------EPKYTNPEEDR--NRVHGKNLMWPGKIYHVLYQV 252
KQI+FMCKTHF +V TR+GWKQYRG RTFPES++A CRPGP R LG +P YTN +D NR K+ +WPGK+Y+VLYQV
Sbjct: 27 KQIMFMCKTHFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGPTRGLGAAXXXXXXXXXXSEVDPGYTNHPDDEKGNRGPTKSALWPGKVYNVLYQV 124
BLAST of mRNA_D-mesarthrocarpus_Contig10107.2.1 vs. uniprot
Match: A0A6H5L718_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L718_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 2.040e-20 Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 1 Query: 10 LFMCKTHFLSVSPDTRDGWKQYRGQRTFPESKVATGCRPGPDRILGPGG---------EPKYTNPEEDR--NRVHGKNLMWPGKIYHVLYQV 252
+FMCKT F +V TR+GWKQYRG RTFPES++A CRPGP R G +P +TN +D NR + +WPGK+Y+VLYQV
Sbjct: 1 MFMCKTRFNTVPLSTREGWKQYRGTRTFPESRIAASCRPGPTRGHGAAXXXXXXXSEVDPGHTNHPDDEKGNRGPTNSALWPGKVYNVLYQV 92 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10107.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10107.2.1 >prot_D-mesarthrocarpus_Contig10107.2.1 ID=prot_D-mesarthrocarpus_Contig10107.2.1|Name=mRNA_D-mesarthrocarpus_Contig10107.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=79bp MCKTHFLSVSPDTRDGWKQYRGQRTFPESKVATGCRPGPDRILGPGGEPKback to top mRNA from alignment at D-mesarthrocarpus_Contig10107:3979..4230- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10107.2.1 ID=mRNA_D-mesarthrocarpus_Contig10107.2.1|Name=mRNA_D-mesarthrocarpus_Contig10107.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=252bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10107:3979..4230- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10107:3979..4230- >mRNA_D-mesarthrocarpus_Contig10107.2.1 ID=mRNA_D-mesarthrocarpus_Contig10107.2.1|Name=mRNA_D-mesarthrocarpus_Contig10107.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=237bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10107:3979..4230- (Discosporangium mesarthrocarpum MT17_79)back to top |