mRNA_D-mesarthrocarpus_Contig10105.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10105.2.1 vs. uniprot
Match: A0A6H5JR94_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR94_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 7.890e-13 Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 3 Query: 54 IMYVMDLIITAYLLFDSQARGFISRCELERKLREAERERKGGGGALLDPTKWGELAWDDGGRLSFQEFVYGFSDWVELGEED 299
+ YV+DL I AY FD + RGFI++ +E+ LR++E E G LLD +W E AWD G RLSFQEF+Y FS W+ L E+D
Sbjct: 379 VKYVLDLFIAAYFQFDKEGRGFITKSTIEKTLRKSENEP--GVSGLLDKKRWSEAAWD-GDRLSFQEFIYAFSLWLGLLEDD 457
BLAST of mRNA_D-mesarthrocarpus_Contig10105.2.1 vs. uniprot
Match: A0A7S3XZL5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZL5_HETAK) HSP 1 Score: 75.1 bits (183), Expect = 3.130e-11 Identity = 35/87 (40.23%), Postives = 55/87 (63.22%), Query Frame = 3 Query: 48 RDIMYVMDLIITAYLLFDSQARGFISRCELERKLREAERERKGGGGALLDPTKWGELAWDDGGRLSFQEFVYGFSDWVELGEEDGGD 308
+++ YVM LI+ YLLFD++ RG+I R ++ +RE ++G +WGE+ WD G +SF+EFVY F+ WV++ +ED D
Sbjct: 199 QELCYVMHLIVGCYLLFDTKGRGYIRRRDVGAAVRERG-GKEGSASGFFSEERWGEMDWDHNGSISFEEFVYAFTRWVDVDDEDEAD 284
BLAST of mRNA_D-mesarthrocarpus_Contig10105.2.1 vs. uniprot
Match: A0A7S4RCY2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RCY2_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 7.870e-8 Identity = 40/98 (40.82%), Postives = 53/98 (54.08%), Query Frame = 3 Query: 27 GGLVLYARDIMYVMDLIITAYLLFDSQARGFISRCELERKLREAERERKGGGGALLDPTKWGELAWDDGGRLSFQEFVYGFSDWVELGEEDGGDEEDE 320
G L+ ++ M I+ AYL+FD A+G+I +L + L + + G LL +W EL D GR+ FQEFVY FS W L ED DEEDE
Sbjct: 145 GSLLAKDKNFRNAMMDILKAYLIFDRSAKGYIEEADLAKMLTN-DYDDGGATQLLLTDERWKELDVDGSGRVDFQEFVYAFSQWCSL--EDDDDEEDE 239
BLAST of mRNA_D-mesarthrocarpus_Contig10105.2.1 vs. uniprot
Match: A0A7S3UWH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWH3_HETAK) HSP 1 Score: 62.8 bits (151), Expect = 1.570e-7 Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 3 Query: 6 EVKENRGGGLVLYARDIMYVMDLIITAYLLFDSQARGFISRCELERKLREAERERKGG---GGA-------LLDPTKWGELAWDDGGRLSFQEFVYGFSDWVELGEEDGGDEED 317
E +E R + Y+ ++ MDL++ AYLLFD G+I R E+ + E E +GG GGA +W E+ D G +SF+EFVY FS WV + E++ DEED
Sbjct: 165 ERRERRASLVAEYSAELRGAMDLMVAAYLLFDRPVNGYIDRAEVA-SVFEDEGASQGGSRKGGAPRHASHGFFTEERWAEMDVDGSGLISFEEFVYCFSKWVGVDEDE--DEED 275
BLAST of mRNA_D-mesarthrocarpus_Contig10105.2.1 vs. uniprot
Match: D8LL80_ECTSI (Calcium ion binding n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL80_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 1.200e-6 Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = 3 Query: 66 MDLIITAYLLFDSQARGFISRCELERKLREAERERKGGGG-ALLDPTKWGELAWDDGGRLSFQEFVYGFSDWVELGEEDGGDE 311
++L AYLLFD + +G ISR ++ + AE +K G ++L +W E+ WD G +SF EFVY F+ WV++ ED DE
Sbjct: 168 LELFTYAYLLFDKECKGVISREQV--MIVVAENGQKDEGSMSILSQERWDEMDWDSNGDISFGEFVYAFTKWVDVDGEDTADE 248
BLAST of mRNA_D-mesarthrocarpus_Contig10105.2.1 vs. uniprot
Match: A0A835YSL5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSL5_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 2.340e-6 Identity = 43/115 (37.39%), Postives = 57/115 (49.57%), Query Frame = 3 Query: 6 EVKENRGGGLVLYARDIMYVMDLIITAYL--------------LFDSQARGFISRCELERKLREAER---ERKGGGGALLDPTKWGELAWDDGGRLSFQEFVYGFSDWVELGEED 299
E K +R G + +++ YV+DLII AY FDS+ GFISR LE++L AE G L +W L W G+LSFQ+FVY FS W++ ED
Sbjct: 288 ESKRDRRGNV----QELRYVLDLIIAAYFQXXXXXXXXXXXXXXFDSKVEGFISRRRLEQQLEGAEGLQGSEPSTHGTFLYEEQWQSL-WGPDGKLSFQDFVYIFSSWIDFDSED 397
BLAST of mRNA_D-mesarthrocarpus_Contig10105.2.1 vs. uniprot
Match: B8BTL1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTL1_THAPS) HSP 1 Score: 57.4 bits (137), Expect = 1.930e-5 Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 3 Query: 3 EEVKENRGGGLVLYARDIMY--VMDLIITAYLLFDSQARGFISRCELERKLREAERERKGGGGALLDPTKWGELAWDDGGRLSFQEFVYGFSDWVELGEEDGGDEED--EREARPVIRKPLM 356
EE K+ G +L + D Y VM ++TAYL FD + +G+ + E + + +R +L +W EL + G + F+EFVY FS WV+ G D DE+D +R A P+ ++ L+
Sbjct: 138 EEDKDVSTFGGMLASGDDEYRRVMTDVVTAYLSFDREGKGYFTAEEFNGFMTAS--KRADAARSLFTEDRWKELDVNGDGTVQFEEFVYAFSQWVDDGGSDEEDEDDTPKRSANPLTQRILL 257 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10105.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10105.2.1 >prot_D-mesarthrocarpus_Contig10105.2.1 ID=prot_D-mesarthrocarpus_Contig10105.2.1|Name=mRNA_D-mesarthrocarpus_Contig10105.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=189bp MYVMDLIITAYLLFDSQARGFISRCELERKLREAERERKGGGGALLDPTKback to top mRNA from alignment at D-mesarthrocarpus_Contig10105:2524..4398- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10105.2.1 ID=mRNA_D-mesarthrocarpus_Contig10105.2.1|Name=mRNA_D-mesarthrocarpus_Contig10105.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1875bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10105:2524..4398- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10105:2524..4398- >mRNA_D-mesarthrocarpus_Contig10105.2.1 ID=mRNA_D-mesarthrocarpus_Contig10105.2.1|Name=mRNA_D-mesarthrocarpus_Contig10105.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=567bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10105:2524..4398- (Discosporangium mesarthrocarpum MT17_79)back to top |