mRNA_D-mesarthrocarpus_Contig1010.7.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1010.7.1 vs. uniprot
Match: A0A6H5KMF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF9_9PHAE) HSP 1 Score: 173 bits (438), Expect = 2.290e-45 Identity = 120/255 (47.06%), Postives = 157/255 (61.57%), Query Frame = 2 Query: 8 SISGMQGHLDAHMSASAYSSHADRKAQEEEKEAMRTRHSXXXXXXXXXXXXXMQQLLLEKDGEYHKMAEGFKKQLNDVQLELLNNRQHIINTESQWRKRVEEVETREKVELARMKGKYKDHYGEQLARAKSEAAAANAALEGMSSGLTIAPEGMDRRSSGPSVSPSLQGYNGTRAEGADGMGIGVGEDPKLRSLALMLEESKKESRSLRDRNQELERVVEALRKTIMRQAELSSQRQEHQXXXXQAHRPPHGPRG 772
S++G++G LDAH++ SA SS ADR ++E+ A+ +H +QQ+L+EKD E K E FKKQLN+VQLELLNNRQH+INTE+QWRKR+EE E RE E+ RM+ ++D +LA KS+ + A+AA+ G+ S + +A RR D K+RSL+L++EE+KKESR LR+RNQELERVVEALRKTIMRQAELSSQRQ+ Q P H RG
Sbjct: 194 SVAGLRGALDAHVAVSAESSAADRHMHQQERAALIDQHEKFVRDLREQHDQTIQQILMEKDVENSKCTESFKKQLNEVQLELLNNRQHMINTEAQWRKRLEEQEQRESGEMMRMREAFQD----ELASVKSDLSTAHAAMGGLGS-MGMAD---GRRGGAXXXXXXXXXXXXXXXXXLXXXXXXXXADHKVRSLSLLVEEAKKESRWLRERNQELERVVEALRKTIMRQAELSSQRQDQQGTGPGQRPPSHAFRG 440
BLAST of mRNA_D-mesarthrocarpus_Contig1010.7.1 vs. uniprot
Match: D7FTA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTA0_ECTSI) HSP 1 Score: 166 bits (419), Expect = 4.180e-44 Identity = 117/255 (45.88%), Postives = 153/255 (60.00%), Query Frame = 2 Query: 8 SISGMQGHLDAHMSASAYSSHADRKAQEEEKEAMRTRHSXXXXXXXXXXXXXMQQLLLEKDGEYHKMAEGFKKQLNDVQLELLNNRQHIINTESQWRKRVEEVETREKVELARMKGKYKDHYGEQLARAKSEAAAANAALEGMSSGLTIAPEGMDRRSSGPSVSPSLQGYNGTRAEGADGMGIGVGEDPKLRSLALMLEESKKESRSLRDRNQELERVVEALRKTIMRQAELSSQRQEHQXXXXQAHRPPHGPRG 772
S++G++G LDAH++ SA SS ADR ++E+ A+ + +QQ+L+EKD E K E FKKQLN+VQLELLNNRQH+INTE+QWRKR+EE E RE E+ RM+ ++D +LA KS+ + A+AA+ G+ G +G D K+RSL+L++EE+KKESR LR+RNQELERVVEALRKTIMRQAELSSQRQ+ Q P H RG
Sbjct: 243 SVAGLRGALDAHVAVSAESSAADRHMHQQERAALVDQQEKFVRDLREQHDQTIQQILMEKDVENSKCTESFKKQLNEVQLELLNNRQHMINTEAQWRKRLEEQEQRESGEMMRMREAFQD----ELASVKSDLSTAHAAMGGL--GAXXMADGXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXDHKVRSLSLLVEEAKKESRWLRERNQELERVVEALRKTIMRQAELSSQRQDQQGTGPGQRPPSHAFRG 489
BLAST of mRNA_D-mesarthrocarpus_Contig1010.7.1 vs. uniprot
Match: A0A835YKF1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKF1_9STRA) HSP 1 Score: 162 bits (410), Expect = 2.640e-42 Identity = 101/184 (54.89%), Postives = 129/184 (70.11%), Query Frame = 2 Query: 164 MQQLLLEKDGEYHKMAEGFKKQLNDVQLELLNNRQHIINTESQWRKRVEEVETREKVELARMKGKYKDHYGEQLARAKSEAAAANAALEGMSSGLTIAPEGMDRRSSGPSVSPSLQGYNGTRAEGADGMGIGVGEDPKLRSLALMLEESKKESRSLRDRNQELERVVEALRKTIMRQAELSSQR 715
+QQ++ EKD E+HK AE FKK LND QLELLNNRQH+INTE+QWR+R+EEVE RE+ E+AR+K DHY LARAKSE AAA LEG+ S + + + +L G + A G +G + + K+RSLA++LEES+KE++ LRDR E ER++EALRKTIMRQAELSSQR
Sbjct: 120 LQQVIQEKDAEHHKAAEMFKKSLNDSQLELLNNRQHMINTEAQWRRRLEEVEQRERAEVARIK----DHYEGLLARAKSETAAA---LEGLGSAVAAG-----------AAAGNLDGVHSGGA-GGEGTQVSAADSEKIRSLAVLLEESRKEAKWLRDRTSESERIIEALRKTIMRQAELSSQR 284
BLAST of mRNA_D-mesarthrocarpus_Contig1010.7.1 vs. uniprot
Match: A0A836CGJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ9_9STRA) HSP 1 Score: 128 bits (322), Expect = 5.080e-30 Identity = 111/286 (38.81%), Postives = 136/286 (47.55%), Query Frame = 2 Query: 164 MQQLLLEKDGEYHKMAEGFKKQLNDVQLELLNNRQHIINTESQWRKRVEEVETREKVELARMKGKYKDHYGEQLARAKSEAAAANAALEGMSSGL----------TIAPEGMDRRSS-----------------------------------------------------------------GPSVSPSLQ------------------GY---NGTRAEGADGMGI------GVGEDPKLRSLALMLEESKKESRSLRDRNQELERVVEALRKTIMRQAELSSQR 715
+QQ++ EKD EYHK E KK LNDVQLELLNNRQH+INTE+QWR+R+E+VE RE+ ELAR K +H+ LARAK E AAA LEG+ L A EG S+ GP V+P + GY +G E +G G+ G+ KLRSLA++LEES+KE+R LRDRN E ERV+EALRKTIMRQAEL+SQR
Sbjct: 76 LQQVIQEKDAEYHKATENHKKALNDVQLELLNNRQHMINTEAQWRRRLEDVEQRERAELARTK----EHFEALLARAKGETAAA---LEGLGRALWKFGGDGQAIAAAREGQLLYSASWSHVGGAQYEAVTLSKPLPPRMLHLPLGGIASAAGLAASIALARDVPLTARTDAPHPSRACALTGPLVAPPVTLRGGSAVAAGAAAGALDGGYPSGSGLSREAGEGGGLQGGXXXXAGDVDKLRSLAMLLEESRKEARWLRDRNGESERVIEALRKTIMRQAELNSQR 354 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1010.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1010.7.1 >prot_D-mesarthrocarpus_Contig1010.7.1 ID=prot_D-mesarthrocarpus_Contig1010.7.1|Name=mRNA_D-mesarthrocarpus_Contig1010.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=264bp MQGHLDAHMSASAYSSHADRKAQEEEKEAMRTRHSKELETLREQHDQAMQback to top mRNA from alignment at D-mesarthrocarpus_Contig1010:19659..23517- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1010.7.1 ID=mRNA_D-mesarthrocarpus_Contig1010.7.1|Name=mRNA_D-mesarthrocarpus_Contig1010.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3859bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1010:19659..23517- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1010:19659..23517- >mRNA_D-mesarthrocarpus_Contig1010.7.1 ID=mRNA_D-mesarthrocarpus_Contig1010.7.1|Name=mRNA_D-mesarthrocarpus_Contig1010.7.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=792bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1010:19659..23517- (Discosporangium mesarthrocarpum MT17_79)back to top |