Homology
BLAST of mRNA_D-mesarthrocarpus_Contig101.2.1 vs. uniprot
Match:
D7FIE3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIE3_ECTSI)
HSP 1 Score: 129 bits (324), Expect = 3.090e-30
Identity = 89/243 (36.63%), Postives = 121/243 (49.79%), Query Frame = 2
Query: 122 LLLFVMVGIDIVLRESGVNAHGQGQCVLGGFVTSC-RSQGLMQARPLLRRTVPSSSQSSFTAR------EGVVMCGGRASGWSKRSGAGGAAMVTFDF----PSFDEFLYITTKGIVWGTLFTLIPQWTKERLREKEMGLDMDE------MAEEEGLEDLIN---YVCATCDNTNEVDCKECQGKGFFVREDAQPKKCDYCDGLGRVSCPVCEERREKLKDLRRRRRVRPYELPPVEEDVGPW 790
+ LF G++ +R +G A G V G R +G Q + + +++ SFTAR + G +R+G G + F P F +L+ T + ++ G LIP+ T ER+REKE G+ DE ++E ++ N YVC TCDNTN+V+C EC GKGFFV A PKKC YC+GLG C CEERRE L+ R RR P ELPP D P+
Sbjct: 10 IALFYCDGVESFVRRTG-RASGTPGFVAGAVAFQRKRPRGSRQGASGSQTPLAAAAAGSFTARTVKSQSNWFEVTGEGRRRTQRRTGGGHGTRMLFGLHFQPPEFSVWLHGTVQAVMLGGFAALIPKVTAERIREKEEGMVRDEDYAAGLWDDDEDFDEYGNAGGYVCPTCDNTNQVECSECGGKGFFVSASAMPKKCTYCNGLGTFDCEDCEERREMLRRERGARRP-PRELPPARGDDFPF 250
BLAST of mRNA_D-mesarthrocarpus_Contig101.2.1 vs. uniprot
Match:
A0A835ZG76_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG76_9STRA)
HSP 1 Score: 80.1 bits (196), Expect = 1.060e-13
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 2
Query: 563 CATCDNTNEVDCKECQGKGFFVREDAQPKKCDYCDGLGRVSCPVCEER 706
C CD E++C+EC+GKGFFV +DA P+KCD C GLG++ CP+CEER
Sbjct: 109 CTACDGALEIECRECRGKGFFVAQDAMPRKCDACGGLGKLPCPLCEER 156
The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig101.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 3.09e-30 / Id = 36.63 Expect = 1.06e-13 / Id = 60.42 Sequence D7FIE3_ECTSI A0A835ZG76_9STRA
Match Name E-value Identity Description
D7FIE3_ECTSI 3.090e-30 36.63 Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more] A0A835ZG76_9STRA 1.060e-13 60.42 Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Model size 1821 Hectar predicted targeting category signal peptide Exons 4 Ec32 ortholog description Heat shock protein DnaJ, cysteine-rich domain Ec32 ortholog Ec-11_001580.1 Cds size 693
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789154.840238-UTR-D-mesarthrocarpus_Contig101:2874..2977 1680789154.840238-UTR-D-mesarthrocarpus_Contig101:2874..2977 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig101 2875..2977 + 1680789154.89537-UTR-D-mesarthrocarpus_Contig101:5444..6469 1680789154.89537-UTR-D-mesarthrocarpus_Contig101:5444..6469 Discosporangium mesarthrocarpum MT17_79 UTR D-mesarthrocarpus_Contig101 5445..6469 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1680789154.8511832-CDS-D-mesarthrocarpus_Contig101:2977..3239 1680789154.8511832-CDS-D-mesarthrocarpus_Contig101:2977..3239 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig101 2978..3239 + 1680789154.8616314-CDS-D-mesarthrocarpus_Contig101:3387..3611 1680789154.8616314-CDS-D-mesarthrocarpus_Contig101:3387..3611 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig101 3388..3611 + 1680789154.872231-CDS-D-mesarthrocarpus_Contig101:3789..3908 1680789154.872231-CDS-D-mesarthrocarpus_Contig101:3789..3908 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig101 3790..3908 + 1680789154.8846736-CDS-D-mesarthrocarpus_Contig101:5356..5444 1680789154.8846736-CDS-D-mesarthrocarpus_Contig101:5356..5444 Discosporangium mesarthrocarpum MT17_79 CDS D-mesarthrocarpus_Contig101 5357..5444 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig101.2.1
>prot_D-mesarthrocarpus_Contig101.2.1 ID=prot_D-mesarthrocarpus_Contig101.2.1|Name=mRNA_D-mesarthrocarpus_Contig101.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=231bp
MGFRATLLLFVMVGIDIVLRESGVNAHGQGQCVLGGFVTSCRSQGLMQAR back to top mRNA from alignment at D-mesarthrocarpus_Contig101:2875..6469+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-mesarthrocarpus_Contig101.2.1 ID=mRNA_D-mesarthrocarpus_Contig101.2.1|Name=mRNA_D-mesarthrocarpus_Contig101.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3595bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig101:2875..6469+ (Discosporangium mesarthrocarpum MT17_79)GTTATATGGTTCAACCCGCACGAGCATAGGTTCACTGTCATGTTGTACGG
CCATCCGAGGCCGTAGACCGTTCATCCGGGGTCGCAGCGGACTGCAAGCC
ACC ATGGGTTTCAGAGCCACGTTGCTACTATTTGTAATGGTAGGGATAGA
CATCGTGCTCCGTGAATCGGGGGTGAATGCGCACGGACAGGGACAGTGCG
TGCTCGGTGGGTTTGTGACCTCCTGCCGAAGTCAGGGTTTGATGCAAGCC
AGGCCGTTGCTGAGGAGGACAGTGCCCTCGTCGTCTCAGAGTAGCTTCAC
CGCTCGAGAGGGTGTCGTGATGTGTGGGGGGAGAGCTTCTGGCTGGAGTA
AACGCTCTGGAGCTG GTGAGAGCACGTGTGGCATACTTCCGAGCTCTGCC
CCAAGACTTGCCCATCCCTGTGCGAACACACAGTCTTCCTTTTCTACCCT
TGCCAACTCTTTGCGTGAACGACCGATGTGCCGCATCCTTTGGGGTTGGG
AAACGGTGTGCAGGTGGAGCTGCCATGGTTACTTTCGATTTCCCGTCCTT
CGACGAGTTCCTGTACATTACCACCAAGGGGATTGTGTGGGGTACCCTGT
TCACTCTAATTCCCCAATGGACCAAGGAGAGACTGAGGGAGAAGGAAATG
GGCTTGGATATGGATGAAATGGCAGAGGAGGAGGGGCTAGAGGATCTTAT
TAACTATGTCTGTGCAACCTGCGACAACACCAATGAG GTACGAAGTTCGT
TGCATGTTGATCATGGTTTCCCCCTCTCAATTTCATTTTGTGGCGCTGCT
TGCGCAAACGCAAAATAAACCCGCCGGAATCCTCAGCCCCGGGTTACGTT
ATGGACCCTCGAATCCTCAATTTCTGGATGATCGTTGCATTTATGTCGTT
TTTGTCCTGCCTTAGGTAGACTGCAAGGAGTGCCAAGGGAAGGGGTTCTT
TGTGAGAGAGGATGCGCAGCCCAAGAAGTGCGACTACTGTGATGGGCTGG
GGAGAGTCAGCTGCCCCGTGTGCGAAGAAAGGAG GTGAGACCACCGGGAG
GGCGGAGGGGAGGGGGGACCATTTCCAGACAGAGAACAAGTAGGAGGGGT
GACAATAAGAGGGGGGGTGCTGGTGAATGTGGTTGTCGCCTCTAGACTCA
TGGTACGGGTACCCTCGTTAGTTGAAATCTTGGTAATGTTGTTGATTGTT
TCATAGTTTTTTTAATCGATTGATGTGTAAGCTCTGCAGGACTGTGCCCT
GTCGCGTACCTCAAGGAATGAACCCTAATCCCACCTAAACCCAAAGAACT
TTTGGAGTAGCAGAGCAAGACCTCTGCACGTTGGGCACAAGACCTCTGTA
CTTGGAAGTGCCCAATGTGCAGAGGTCTTGACTTCCGTGGCATGTAGTAC
AATGATTTCAAAGTGCCTTACCTAGAAAGAAACTCTTTATATCAAGTACT
TGATTACAGTGGACGAAAACAGCCTCTAGTTGAGGACAGAGGAGAAAAAC
TAAGAAATGTAACTGATAGTGGAAGACCACAAAGGAAGAAAAGTTAAGCA
ACTATGCCTGGACCACGTGGGCTGGGTGGTGAGGAAGGGTTGTGTTGGTA
GTAGTGGGTGCTAAATTAACGTTGTTGGTATTAACCTGTTTGCCAGTGAT
TGACATTTTTGGAAATAAATTAAACTTTGTGTAGAATAGACCAACCAATT
CCACACCAGTCATGGAAAACATTAATTTTGCATGCAGCGTGCAGTATGTA
TTAAACAGGAAAAATAAAGATCATGTTCCAGTGGCGAACAGTCAACCTGC
TTGTTACAGAGGGGGCCCAATTGACGCTTTTTGGATAAAAAATTGTCAAT
TGGGGATTCATTGTCCCAGCACTCACGGCAGACAGAAACTCAAAACATTT
ATCCCTAACCCTAAATGAGGGTTACAAGGCTTCGGTGGTGAGGGGGTTAA
TAGTTGGGTTTGGGTTAGGATGAGGGGTGAGAAAAGAAAAACACACGATT
TATATCTTAATAAATCCTCAAGGACCTCTACAGTAGCTCAAAACTCCTGC
AAAAACCAGCTAGGGTTAGGGTTGGATTGACCATACAGTCGTCCATCATC
GGTGATTGGCTTCTGTATTGATTTTTGCTCCTCTTGAGCTACGGTAGTGG
AGCTATTTGAATTGACATGGTACTCACAAAGCACTGGCTGATTCCCCTGT
CGTGGCTGTGAATGGCATAGCTGTAGACCCTTCAATCCCACTCTGAGAAG
AAACACCGAGTTATGTGCATCAGGTGTTATCATTAGGCTAGTTTGTAGAG
CTACCAACCCTAATCCTATGGAGCATGATCACGGCCGCCATTGCTGCATA
TCACAATAGCAACCGCCTGTTCACCCAGTTCGCTCTTGCCTGATACATGC
TAATAGCAAGCCCGCTGTGTTCCCCATGTTGCCCAAACACTTGCACACCA
ACATTGTTGTTTGGTCCACTGGGGACCTCCAGGGAGAAGCTCAAGGATTT
AAGGCGACGAAGGAGAGTTAGGCCTTATGAACTTCCCCCAGTAGAGGAGG
ATGTGGGCCCATGGCGATAG ATTCCTGCTTGATGCTCCCGTTGTGTTGGA
CTCAGCTACCCTAAACCTAAGCCTCTCCATATTTTTTTGTTTTGGCTTGT
GCCTGAAAAAGCGCTTTCTTCTCAAAATGGAGGCTAAGTGACAGGCAATA
GGGTAGCTGTAGCTCATCAAGCACTCTGGGTTGCTCCTGAATAGTTTTTC
TCCAGATCAAGCATGGTACCCTCCAGCTGTACTATCGAGTCGAGTGGAAG
ACCGATAACCCTAACCCTAACTTGATGCGAATGGGTTGTTTCGTTCTTAG
GGTTAGGGGTTTTCGATATACATGTTGCCCTATAGAGGTCTAGGGCTTGT
GTATAGCTTGAATTTGACCAGAACAGTCATGAATGCACCCTTGGCTGTGT
GCCCCACAAGATCTGACAGACAACGGACATAAACCATAGCCTTAAAAGGG
CACAGTATCCAGAATCAAGGACTGACGCGTGTGTGTGTAGTGGGAGGAAA
CCACCTGGTTCCTCGGCATCCTGGTCAAACTTGTCAGCTTTTGAGTTCAG
AGGAGAGGCTTCCATCAAGGTGCAAGGCTCACCGCTTTACCTGGTACAGT
ATGTAGTACGAAGTCAAGGTAACATGTTCTTCTGAGCGGTGCCGTAAGGT
GGCAGGGCATCTGCACCCTTTGGAGGGGTATCGTTATCGGCCTAACCCTA
TCTCTAACCCTCAATTAGCGCCCTACAGCAGAGTACGTCCGACATGTCGG
AACGTAAGGAGTGCGGAGAGATAGATAACGCTTTTTGTTGTTTTGTCTTC
GTCAAACTGTGTAAGGCTTAGGGTTAGGAATATCCTCCCCCTCTCCCCCT
TATATGCCGTCTGTCTGATGGTCAGAGTTTGGGTCCGCAATGTTGTTCCA
TTGAGGGTGGGGTACCAGTTTATCAGGTCGACCAAAGTCCAGGTTTCATC
CGCAGCATGTGGTACAACAGTACTCGGGAAGTACTACAAGTTGATAAAAA
CACAGTAGCAGAGCTTCGGCTCCAAATTGCTCTGTTTCACTCTTT back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig101:2875..6469+
>mRNA_D-mesarthrocarpus_Contig101.2.1 ID=mRNA_D-mesarthrocarpus_Contig101.2.1|Name=mRNA_D-mesarthrocarpus_Contig101.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=693bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig101:2875..6469+ (Discosporangium mesarthrocarpum MT17_79) back to top