mRNA_D-mesarthrocarpus_Contig101.10.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Match: D7G240_ECTSI (Trafficking protein particle complex subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G240_ECTSI) HSP 1 Score: 231 bits (590), Expect = 9.260e-72 Identity = 114/146 (78.08%), Postives = 124/146 (84.93%), Query Frame = 1 Query: 217 MIYNLYIFNRKGKCLYYREWHRPLNTLEH--DQLEEQRLMFGMLYSIKELVTKMSQDPKTAALHALKTGSYTLHHLETSSGLRFVLNTDNNAGDLRANLHHLYSRIYVEHVIKHPQYVPGDGNRIRLPGFDSKLEEYLRGLACFSS 648 MIYNLYIFNRKGKCLYYREW+RP NTLE+ D EEQRLMFGMLYS+KE+VTKMS DP +A LHALKT SYTLHHLET SGLRFVLNTDNNAGDLR L LYS I+VE+V KHPQ+ P DG+ IRLP FDS+LEEYLR LACF S Sbjct: 1 MIYNLYIFNRKGKCLYYREWNRPQNTLENAADDGEEQRLMFGMLYSLKEVVTKMSTDPASAGLHALKTDSYTLHHLETGSGLRFVLNTDNNAGDLRPTLRQLYSGIFVEYVAKHPQFNPVDGSPIRLPAFDSRLEEYLRSLACFKS 146
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Match: A0A835ZQ36_9STRA (Trafficking protein particle complex subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ36_9STRA) HSP 1 Score: 177 bits (450), Expect = 6.980e-51 Identity = 83/142 (58.45%), Postives = 106/142 (74.65%), Query Frame = 1 Query: 217 MIYNLYIFNRKGKCLYYREWHRPLNTLEHDQLEEQRLMFGMLYSIKELVTKMSQDPKTAALHALKTGSYTLHHLETSSGLRFVLNTDNNAGDLRANLHHLYSRIYVEHVIKHPQYVPGDGNRIRLPGFDSKLEEYLRGLACF 642 MI+N YIFNR GKCL+Y+EW+RP NTL+HD EE+RLMFGMLYS++ELV KM AL + T SYTL+ ET+SGLRFVLNTDN AGDL A L H+Y I+V+ V+KHP + P G ++LP F+ +LE+Y++ L CF Sbjct: 1 MIFNFYIFNRNGKCLFYKEWNRPQNTLQHDDGEEKRLMFGMLYSLQELVGKMGGGDGKGALQSFTTDSYTLNFFETASGLRFVLNTDNRAGDLTAILRHIYGNIFVDLVVKHPMFEPKAGVPLQLPMFEEELEKYMKSLPCF 142
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Match: A0A7S2RBL8_9STRA (Trafficking protein particle complex subunit n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBL8_9STRA) HSP 1 Score: 173 bits (438), Expect = 5.590e-49 Identity = 83/145 (57.24%), Postives = 108/145 (74.48%), Query Frame = 1 Query: 217 MIYNLYIFNRKGKCLYYREWHRPLNTLE-HDQLEEQRLMFGMLYSIKELVTKMSQDPKTAALHALKTGSYTLHHLETSSGLRFVLNTDNNAGDLRANLHHLYSRIYVEHVIKHPQYVPGDGNRIRLPGFDSKLEEYLRGLACFSS 648 MIYNLYIFNRKG CLYYREW RP N+ DQ EE++L+FGML+SIKE+V++M+ A L +++TG++TLHHLET +G RFVLNTD DLR NL H+YS I+VE+V+K+P + P I +P FDS L EY++ L+CF S Sbjct: 1 MIYNLYIFNRKGVCLYYREWKRPFNSFPPDDQDEERKLVFGMLFSIKEMVSRMTPRTADAGLSSIQTGNFTLHHLETVTGFRFVLNTDTATTDLRQNLQHIYSEIFVEYVLKNPLFDPMTSTSIEIPLFDSNLSEYIQLLSCFRS 145
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Match: A0A7S2AMS8_9STRA (Trafficking protein particle complex subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMS8_9STRA) HSP 1 Score: 169 bits (427), Expect = 1.850e-47 Identity = 82/143 (57.34%), Postives = 106/143 (74.13%), Query Frame = 1 Query: 217 MIYNLYIFNRKGKCLYYREWHRPLNTL-EHDQLEEQRLMFGMLYSIKELVTKMSQDPKTAALHALKTGSYTLHHLETSSGLRFVLNTDNNAGDLRANLHHLYSRIYVEHVIKHPQYVPGDGNRIRLPGFDSKLEEYLRGLACF 642 MIYN YIF+R+G CLYYREW+RP ++ ++D EE++L+FGML+SIKELV++MS P T LH LKT ++TLHHLET+SGLRFVLNTD + GDLR +L H++S I+VE+VIK+P Y I P F L YL L+CF Sbjct: 1 MIYNFYIFDRRGTCLYYREWNRPYSSFSDYDAAEERKLVFGMLFSIKELVSRMSSRPGTEGLHCLKTNNFTLHHLETASGLRFVLNTDGDTGDLRPSLRHIFSSIFVEYVIKNPLYDRLSTEPIDSPLFSRHLGVYLESLSCF 143
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Match: A0A4D9D8U8_9STRA (Trafficking protein particle complex subunit n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8U8_9STRA) HSP 1 Score: 158 bits (399), Expect = 2.840e-43 Identity = 81/148 (54.73%), Postives = 105/148 (70.95%), Query Frame = 1 Query: 217 MIYNLYIFNRKGKCLYYREWHRPLNTLEHDQLEEQRLMFGMLYSIKELVTKMSQDPKTAA---LHALKTGSYTLHHLETSSGLRFVLNTDNNAGDLRANLHHLYSRIYVEHVIKHPQYVPGDGNRI-RLP-GFDSKLEEYLRGLACFS 645 MIYNLYIF+R+G CL+YREW RPLNTL D EE++LMFGMLYSIK LV + ++ L+ L+T +YTLHH ET +GLRFVLNTDN+ D+R +L H+YS I+V+HV+++PQY G+G RLP F LE+Y+ L F Sbjct: 1 MIYNLYIFDRRGACLFYREWCRPLNTLAEDPEEEKKLMFGMLYSIKGLVAALGSKNAPSSSDGLNHLRTNAYTLHHFETLTGLRFVLNTDNSIVDMRGHLRHIYSGIWVQHVVQNPQYKIGEGGSAGRLPPAFAQSLEQYVTNLPGFK 148
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Match: A0A812VIE8_SYMMI (Trafficking protein particle complex subunit n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VIE8_SYMMI) HSP 1 Score: 151 bits (382), Expect = 6.800e-41 Identity = 70/137 (51.09%), Postives = 99/137 (72.26%), Query Frame = 1 Query: 217 MIYNLYIFNRKGKCLYYREWHRPLNTLEHDQLEEQRLMFGMLYSIKELVTKMSQDPKTAALHALKTGSYTLHHLETSSGLRFVLNTDNNAGDLRANLHHLYSRIYVEHVIKHPQYVPGDGNRIRLPGFDSKLEEYLR 627 MIYNLYI++RKGKCL+Y+EW RP+NTL D EE+RLMFGML+S+K+L K++ LH +KT +YTLHH E+ +G+ F++N+D + DL NL H+Y+ I+VE VI++P Y + I P F+ KLE+Y+R Sbjct: 1 MIYNLYIYDRKGKCLFYKEWSRPMNTLADDPGEEKRLMFGMLFSLKDLAAKLAPSIGPQGLHTVKTNAYTLHHFESVTGMSFIMNSDPSLPDLYHNLQHIYNNIFVECVIRNPLYRHCPHDAIDCPLFEKKLEDYVR 137
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Match: A0A7R9YCB9_9STRA (Trafficking protein particle complex subunit n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCB9_9STRA) HSP 1 Score: 149 bits (377), Expect = 1.630e-39 Identity = 81/173 (46.82%), Postives = 106/173 (61.27%), Query Frame = 1 Query: 136 GIPRSLVCRRAPWVGQGELASGLSLLTMIYNLYIFNRKGKCLYYREWHRPLNTL--EHDQLEEQRLMFGMLYSIKELVTKMS-----QDPKTAALHALKTGSYTLHHLETSSGLRFVLNTDNNAGDLRANLHHLYSRIYVEHVIKHPQYVPGDGNRIRLPGFDSKLEEYLRGL 633 G P S APW+ QG+ MI+N+YIF+R G CL+Y+EWHRPLNTL E D E+ RLMFGML+S+KE+V KMS + + + ++T +Y+ H ET +GLRFVLN D A LR L +Y+ I+VE VIK+P Y P DG F+ +LE YLR L Sbjct: 17 GSPASQTLSHAPWLAQGQ--------GMIFNMYIFSRSGSCLFYKEWHRPLNTLSGEEDPGEDARLMFGMLFSLKEIVGKMSGRSAEKGERREDIQVMRTSTYSTHLYETQTGLRFVLNVDAAAPSLRGELEEIYAGIFVEKVIKNPLYDPRDGPPEIPEDFEEELEAYLRAL 181
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Match: A0A067CRD6_SAPPC (Trafficking protein particle complex subunit n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CRD6_SAPPC) HSP 1 Score: 135 bits (339), Expect = 1.660e-34 Identity = 69/146 (47.26%), Postives = 92/146 (63.01%), Query Frame = 1 Query: 217 MIYNLYIFNRKGKCLYYREWHRPLNTLE-HDQLEEQRLMFGMLYSIKELVTKMSQDPKTAALHALKT---GSYTLHHLETSSGLRFVLNTDNNAGDLRANLHHLYSRIYVEHVIKHPQYVPGDGNRIRLPGFDSKLEEYLRGLACF 642 MIYNLYIFNR G CL Y EW+R + + D EE+RLMFG+++S+KE + KM+ T + +LKT +YT HHLET+SGLRF+L +DNN GDL+ L HLY +YVE V K+P + I+ F + Y+ L CF Sbjct: 1 MIYNLYIFNRAGACLLYEEWNRSSDAMTLSDAEEEKRLMFGLIFSLKEFLRKMAPTASTTSSQSLKTFKTDTYTCHHLETASGLRFILTSDNNTGDLQDVLQHLYGNLYVELVTKNPVHDAKSTKPIKCKLFRHSVRHYMESLPCF 146
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Match: A0A6A4ZH59_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZH59_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.970e-34 Identity = 69/148 (46.62%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 217 MIYNLYIFNRKGKCLYYREWHRPLNTLE-HDQLEEQRLMFGMLYSIKELVTKMS---QDPKTAALHALKTGSYTLHHLETSSGLRFVLNTDNNAGDLRANLHHLYSRIYVEHVIKHPQYVPGDGNRIRLPGFDSKLEEYLRGLACFSS 648 MIYN YIFNR G CL Y EW+R + + +D EE+RLMFG+++S+KE + KMS P+T +L KT YT HHLET SGLRF+L+TDN +GDL+ L ++Y +YVE V K+P + ++ F + ++ Y+ LACF S Sbjct: 17 MIYNFYIFNRSGACLMYEEWNRSNDAMTLNDAEEEKRLMFGLIFSLKEFLRKMSPPTSTPQTHSLKTFKTDVYTCHHLETPSGLRFILSTDNQSGDLQEALQYMYGNLYVELVTKNPVHDARSTKPVKCKLFRANIKAYIESLACFKS 164
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Match: A0A7S3HIB3_9STRA (Trafficking protein particle complex subunit (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HIB3_9STRA) HSP 1 Score: 132 bits (333), Expect = 8.630e-34 Identity = 63/135 (46.67%), Postives = 92/135 (68.15%), Query Frame = 1 Query: 217 MIYNLYIFNRKGKCLYYREWHRPLNTLEHDQLEEQRLMFGMLYSIKELVTKMSQDPKTAA-LHALKTGSYTLHHLETSSGLRFVLNTDNNAGDLRANLHHLYSRIYVEHVIKHPQYVPGDGNRIRLPGFDSKLEE 618 M +N YIFNRKGKCL+Y+EW RP+N + D EE++L+FGML+S+K+L +K+S D + LH +KT ++TLHH ++ SGL FVLNT + D NL H+YS I+VE + ++P Y ++ F S+LE+ Sbjct: 1 MFHNFYIFNRKGKCLFYKEWDRPVNKMADDPEEEKKLVFGMLFSLKDLTSKLSPDGQGLDHLHTVKTNAFTLHHYQSPSGLMFVLNTHPDVADFHNNLQHVYSNIFVECIARNPLYKHKPDEPLKCALFVSRLED 135 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig101.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig101.10.1 >prot_D-mesarthrocarpus_Contig101.10.1 ID=prot_D-mesarthrocarpus_Contig101.10.1|Name=mRNA_D-mesarthrocarpus_Contig101.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=145bp MIYNLYIFNRKGKCLYYREWHRPLNTLEHDQLEEQRLMFGMLYSIKELVTback to top mRNA from alignment at D-mesarthrocarpus_Contig101:42221..44596- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig101.10.1 ID=mRNA_D-mesarthrocarpus_Contig101.10.1|Name=mRNA_D-mesarthrocarpus_Contig101.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2376bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig101:42221..44596- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig101:42221..44596- >mRNA_D-mesarthrocarpus_Contig101.10.1 ID=mRNA_D-mesarthrocarpus_Contig101.10.1|Name=mRNA_D-mesarthrocarpus_Contig101.10.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=435bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig101:42221..44596- (Discosporangium mesarthrocarpum MT17_79)back to top |