mRNA_D-mesarthrocarpus_Contig10097.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5J7U9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7U9_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 2.910e-15 Identity = 48/107 (44.86%), Postives = 63/107 (58.88%), Query Frame = 1 Query: 10 MLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
ML +L C G + K + I + T+TRAV L+RVF+DL SL G Y IV+DDY+R+ RVY L+ KSDA A +R+LAE A ++ VRSD GG
Sbjct: 1 MLVGELWECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 107
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5JYF9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF9_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 1.000e-14 Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
G L +L C G + K + I + T+TRAV L+RVF+DL SL G Y IV+DDY+R+ RVY L+ KSDA A +R+LAE A ++ VRSD GG
Sbjct: 133 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRADGAPSDVIVVRSDNGG 241
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5L158_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L158_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.250e-14 Identity = 48/109 (44.04%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
G L +L C G + K + I + T+TRAV L+RVF+DL SL G Y IV+DDY+R+ RVY L+ KSDA A +R+LAE A ++ VRSD+GG
Sbjct: 180 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRADGAPSDVMVVRSDDGG 288
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5KGN1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN1_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.750e-14 Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
G L +L C G + K + I + T+TRAV L+RVF+DL SL G Y IV+DDY+R+ RVY L+ KSDA A +R+LAE A ++ VRSD GG
Sbjct: 30 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 138
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5L8P7_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P7_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.780e-14 Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
G L +L C G + K + I + T+TRAV L+RVF+DL SL G Y IV+DDY+R+ RVY L+ KSDA A +R+LAE A ++ VRSD GG
Sbjct: 352 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 460
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.790e-14 Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
G L +L C G + K + I + T+TRAV L+RVF+DL SL G Y IV+DDY+R+ RVY L+ KSDA A +R+LAE A ++ VRSD GG
Sbjct: 339 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 447
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.800e-14 Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
G L +L C G + K + I + T+TRAV L+RVF+DL SL G Y IV+DDY+R+ RVY L+ KSDA A +R+LAE A ++ VRSD GG
Sbjct: 698 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 806
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.810e-14 Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
G L +L C G + K + I + T+TRAV L+RVF+DL SL G Y IV+DDY+R+ RVY L+ KSDA A +R+LAE A ++ VRSD GG
Sbjct: 533 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 641
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.810e-14 Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
G L +L C G + K + I + T+TRAV L+RVF+DL SL G Y IV+DDY+R+ RVY L+ KSDA A +R+LAE A ++ VRSD GG
Sbjct: 546 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 654
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 1.810e-14 Identity = 48/109 (44.04%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 4 GIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLES---TPSLRGMLYDAIVRDDYSRFMRVYPLRVKSDAYTALQRFLAEINTLKANHVLLTVRSDEGG 321
G L +L C G + K + I + T+TRAV L+RVF+DL SL G Y IV+DDY+R+ RVY L+ KSDA A +R+LAE A ++ VRSD GG
Sbjct: 689 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGG 797 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10097.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10097.1.1 >prot_D-mesarthrocarpus_Contig10097.1.1 ID=prot_D-mesarthrocarpus_Contig10097.1.1|Name=mRNA_D-mesarthrocarpus_Contig10097.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=107bp MGIMLTTDLTTCPGYAMGKTIRSRIRSSTTTRAVSPLERVFMDLESTPSLback to top mRNA from alignment at D-mesarthrocarpus_Contig10097:134..454- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10097.1.1 ID=mRNA_D-mesarthrocarpus_Contig10097.1.1|Name=mRNA_D-mesarthrocarpus_Contig10097.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=321bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10097:134..454- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10097:134..454- >mRNA_D-mesarthrocarpus_Contig10097.1.1 ID=mRNA_D-mesarthrocarpus_Contig10097.1.1|Name=mRNA_D-mesarthrocarpus_Contig10097.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=321bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10097:134..454- (Discosporangium mesarthrocarpum MT17_79)back to top |