mRNA_D-mesarthrocarpus_Contig10096.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: A0A6A4XRJ4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XRJ4_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 9.690e-16 Identity = 61/187 (32.62%), Postives = 87/187 (46.52%), Query Frame = 1 Query: 1 DMYDLVHVDEKWFYI--MNDGTGVLPTPCIE---VQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILP---------GHP--IFVQQDGGNLHTGKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510 D+YD VHVDEKWF+I +N V I V++K F +K MF+ +VA W +FDGK G WP V+ + +R SK +G + +T +E N ++P G P +FVQQD + H EA+ ++M +PAN P NV D GFF ++ Sbjct: 91 DLYDQVHVDEKWFFITTVNKKFYVYDDEEIALRAVKSKNFITKVMFIAAVARPRWDAHRKTFFDGKLGIWPFVEYAVAQRTSKNRPKGTIETKTKTVDGAVYKE----------SILNKVIPAIKARFPIGGQPNGVFVQQDNASPHKCVTT-EALIAHGVTGISMANQPANSPDFNVLDLGFFNAI 266
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: A0A6A4XMT7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XMT7_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.140e-15 Identity = 61/187 (32.62%), Postives = 87/187 (46.52%), Query Frame = 1 Query: 1 DMYDLVHVDEKWFYI--MNDGTGVLPTPCIE---VQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILP---------GHP--IFVQQDGGNLHTGKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510 D+YD VHVDEKWF+I +N V I V++K F +K MF+ +VA W +FDGK G WP V+ + +R SK +G + +T +E N ++P G P +FVQQD + H EA+ ++M +PAN P NV D GFF ++ Sbjct: 192 DLYDQVHVDEKWFFITTVNKKFYVYDDEEIALRAVKSKNFITKVMFIAAVARPRWDAHRKTFFDGKLGDWPFVEYAVAQRISKNCPKGTIETKTKTVDGAVYKE----------SILNNVIPAIKARFPIGGQPNGVFVQQDNASPHKCVTT-EALIAHGVTGISMANQPANSPDFNVLDLGFFNAI 367
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: W4G370_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G370_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.480e-14 Identity = 58/183 (31.69%), Postives = 78/183 (42.62%), Query Frame = 1 Query: 1 DMYDLVHVDEKWFYIMNDGTGVLPTPCIEVQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILPG----------HPIFVQQDGGNLHTGKRVMEAIQDVAEYNLAMET--EPANPPGLNVNDTGFFQSM 510 DMYD VHVDEKWF+ MN VQ K+ K MFL +VA W +G WFDGK GTW +IV +R S + G P T R + + ++P + +QQD H ++ + ME +P N P LNV D GFF+++ Sbjct: 135 DMYDTVHVDEKWFF-MN-----------RVQKKHHLLKVMFLTAVAHPRWDETSGKWFDGKLGTWHFTEIVPAQRRSGRRDAGTPVMTTVSVT----------RETYKAMLVDKVIPAIRAKWPGGETKAVKIQQDNARPHVPPSDVDVVAACKADGWDMEVVFQPPNSPDLNVLDLGFFRAI 295
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: UPI000E70440D (uncharacterized protein LOC113337402 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E70440D) HSP 1 Score: 77.8 bits (190), Expect = 3.710e-14 Identity = 60/188 (31.91%), Postives = 82/188 (43.62%), Query Frame = 1 Query: 1 DMYDLVHVDEKWFYIMNDGTGVLPTPCIE-----VQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILP---------GHPIFVQQDGGNLH---TGKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510 DMY+ +H+DEKWFY+ P E +K F K MFL +VA + + FDGK G W V +V +R SK G + V R+ +LP G IFVQQD H T + EA++ + ++ M +PAN P LN ND GFF+S+ Sbjct: 55 DMYNRIHIDEKWFYMSKTSQKYYLHPLEEEPLRTCHSKRFLPKVMFLSAVARPRFDAAGNVIFDGKIGIWAFVFMVAAQRTSKNRVAGTIEMRPMKSVTKIV---------TRSFLIEKLLPAIKQKWPHDGSTIFVQQDNAKPHISITDREFCEAVRQ-SGMDVQMCFQPANSPDLNTNDLGFFRSI 232
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: UPI000CD8153E (uncharacterized protein LOC111904485 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD8153E) HSP 1 Score: 77.4 bits (189), Expect = 6.560e-14 Identity = 57/188 (30.32%), Postives = 89/188 (47.34%), Query Frame = 1 Query: 1 DMYDLVHVDEKWFYIMNDGTG--VLPT---PCIEVQNKYFFSKYMFLVSVAWLWKFCNGMW-FDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILP--------GH--PIFVQQDGGNLHTGKRVMEAIQDVAE--YNLAMETEPANPPGLNVNDTGFFQSM 510 DM++++H+DEKWFY+ ++P P Q+K F +K MFL +VA +G F GK G +P + KR SK EG + + EV R+ +LP H PIF+QQD N H E ++ ++ +++ + +P+N P LNV D GFF+++ Sbjct: 91 DMFNVIHIDEKWFYMSKPSRRYYLVPDEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVEGTLETKPILSMTKEV---------TRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNTNPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAI 269
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 78.6 bits (192), Expect = 6.970e-14 Identity = 60/181 (33.15%), Postives = 86/181 (47.51%), Query Frame = 1 Query: 1 DMYDLVHVDEKWFYIM--NDGTGVL---PTPCIEVQNKYFFSKYMFLVSVAWLWKFCN-GMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHG-QWGEVQEGRD*RGHPRNQDENAIL-PGHPIFVQQDGGNLH---TGKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510 DMYD +H+DEKWFY+ N T + P P ++K F K MFL +VA + FDGK G WP V +R+S G + E Q+ + P Q++ + PIF+Q+D H + V EA ++ A +N+ + T+P N P NV D GFF S+ Sbjct: 228 DMYDTIHIDEKWFYLKTTNQKTYLCSGEPEPHSTCKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCWKSRPIFIQEDNAKPHHLRSRAAVREAARE-AGWNITVTTQPPNSPDFNVLDLGFFASI 407
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: UPI000B909CC2 (uncharacterized protein LOC110944619 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B909CC2) HSP 1 Score: 75.1 bits (183), Expect = 1.400e-13 Identity = 54/188 (28.72%), Postives = 85/188 (45.21%), Query Frame = 1 Query: 1 DMYDLVHVDEKWFYIMNDGTG--VLP---TPCIEVQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILPG----------HPIFVQQDGGNLHTGKRVMEAIQDVAE--YNLAMETEPANPPGLNVNDTGFFQSM 510 DM+++VH+DEKWFY+ G ++P P ++K F +K MFL +VA + F GK G +P + KR SK GN + + EV R+ + +LP PIF+QQD + +Q+ + +++ + +P N P LNV D GFF ++ Sbjct: 13 DMFNVVHIDEKWFYMSKSSKGYYLVPGEDEPLRTCKSKKFITKVMFLAAVARPRFDTLGNEIFSGKVGIFPFTKLEPAKRSSKNRVTGNMETKPILSVTKEV---------TRSWLIDKVLPAIRDKWPQDHTGPIFIQQDNAKPQISIDDEQFVQEASRGGFDIRLSFQPPNSPDLNVLDLGFFHAI 191
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: A0A6D2J0F6_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J0F6_9BRAS) HSP 1 Score: 77.0 bits (188), Expect = 2.510e-13 Identity = 56/189 (29.63%), Postives = 85/189 (44.97%), Query Frame = 1 Query: 1 DMYDLVHVDEKWFYIMN--DGTGVLPT---PCIEVQNKYFFSKYMFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILP-----------GHPIFVQQDGGNLHT--GKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510 DMY++VH+DEKWFY+ + +LP P Q+K F +K MFL ++A + F GK G +P V + KR SK G + + S R H ++ N ++P G IF+QQD H G + E +++ + +P N P LN+ D GFF ++ Sbjct: 314 DMYNIVHIDEKWFYMTKKMEKYYLLPEEEDPHRTCQSKNFITKVMFLAAMARPRFDEEGNETFSGKIGIFPFVSLEPAKRRSKHRAAGTLEWKASTSVK---------REHVKDFLINKVIPVIHERWPKEDLGKTIFIQQDNARTHINCGDKDFEEAASKTGFDIRLMCQPPNSPDLNILDLGFFSAI 493
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: A0A6G0WC47_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WC47_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.630e-13 Identity = 61/192 (31.77%), Postives = 80/192 (41.67%), Query Frame = 1 Query: 1 DMYDLVHVDEKWFYIMNDGTGV-------LPTPCIEVQNKYFFSKYMFLVSVAWLWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*RGHPRNQDENAILPG-------------HPIFVQQDGGNLHT--GKRVMEAIQDVAEYNLAMETEPANPPGLNVNDTGFFQSM 510 DMYD VHVDEKWFY+ LP C+E NK K MFL +VA + G ++GK G W I DIV KR SK G P + R R+ +LP I++QQD H ++ A +++ + +PA P LNV D GFF S+ Sbjct: 119 DMYDCVHVDEKWFYVTRTKIRFYLWPDEELPHRCVE--NKGHIEKVMFLYAVA---RPREG--WNGKVGCWEITDIVTAKRTSKNRPAGTPLAVPTTIN----------REKYRSMLMQHVLPAIQSRWIWPSGFSAGTIWIQQDNARSHVLPNDSLVLAAGKEGSWDIRLRNQPAKSPDLNVLDLGFFNSI 293
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Match: A0A6A4ZY01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZY01_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 2.680e-13 Identity = 59/183 (32.24%), Postives = 84/183 (45.90%), Query Frame = 1 Query: 1 DMYDLVHVDEKWFYIMNDGTGVLPTPCIEVQNKYFFSKY---MFLVSVAW-LWKFCNGMWFDGKTGTWPIVDIVLVKRDSKKIQEGNPDHETSHGQWGEVQEGRD*-RGHPRNQDENAILPGHP------IFVQQDGGNLHTGKRVMEAIQDVAEYNLAMET--EPANPPGLNVNDTGFFQSM 510 DMYD VHVDEKWF++ V +++ + SK+ MFL +VA W G WFDGK GTW +IV +R S + G P +T V R+ + ++D AI P + +QQD H ++ + ME +P N P LNV D GFF+++ Sbjct: 87 DMYDTVHVDEKWFFMTRLQKKVYGAIGEKIKQRACKSKHHLVMFLTAVARPRWDETCGEWFDGKLGTWHFTEIVPAQRRSSRRDAGTPVMKT-------VSVTRETYKAMLVDKDIPAIRAKWPRGDTKAVKIQQDNAQPHVPPSDVDVVAACKADGWDMEVVFQPPNSPDLNVLDLGFFRAI 262 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10096.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10096.1.1 >prot_D-mesarthrocarpus_Contig10096.1.1 ID=prot_D-mesarthrocarpus_Contig10096.1.1|Name=mRNA_D-mesarthrocarpus_Contig10096.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=101bp MYDLVHVDEKWFYIMNDGTGVLPTPCIEVQNKYFFSKYMFLVSVAWLWKFback to top mRNA from alignment at D-mesarthrocarpus_Contig10096:3088..3615+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10096.1.1 ID=mRNA_D-mesarthrocarpus_Contig10096.1.1|Name=mRNA_D-mesarthrocarpus_Contig10096.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=528bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10096:3088..3615+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10096:3088..3615+ >mRNA_D-mesarthrocarpus_Contig10096.1.1 ID=mRNA_D-mesarthrocarpus_Contig10096.1.1|Name=mRNA_D-mesarthrocarpus_Contig10096.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=303bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10096:3088..3615+ (Discosporangium mesarthrocarpum MT17_79)back to top |