Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1370 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-06_010540.1 |
| Cds size | 1038 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789154.2458503-UTR-D-mesarthrocarpus_Contig10091:1171..1468 | 1680789154.2458503-UTR-D-mesarthrocarpus_Contig10091:1171..1468 | Discosporangium mesarthrocarpum MT17_79 | UTR | D-mesarthrocarpus_Contig10091 1172..1468 - |
| 1680789154.298078-UTR-D-mesarthrocarpus_Contig10091:3775..3810 | 1680789154.298078-UTR-D-mesarthrocarpus_Contig10091:3775..3810 | Discosporangium mesarthrocarpum MT17_79 | UTR | D-mesarthrocarpus_Contig10091 3776..3810 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789154.2626152-CDS-D-mesarthrocarpus_Contig10091:1468..1720 | 1680789154.2626152-CDS-D-mesarthrocarpus_Contig10091:1468..1720 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig10091 1469..1720 - |
| 1680789154.274909-CDS-D-mesarthrocarpus_Contig10091:2383..2545 | 1680789154.274909-CDS-D-mesarthrocarpus_Contig10091:2383..2545 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig10091 2384..2545 - |
| 1680789154.2839274-CDS-D-mesarthrocarpus_Contig10091:3151..3775 | 1680789154.2839274-CDS-D-mesarthrocarpus_Contig10091:3151..3775 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig10091 3152..3775 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10091.2.1 >prot_D-mesarthrocarpus_Contig10091.2.1 ID=prot_D-mesarthrocarpus_Contig10091.2.1|Name=mRNA_D-mesarthrocarpus_Contig10091.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=346bp
MYPLATNENELSDDYNKLNPAEILVEGFKGAPEGEKIQAKQGSNSGTEEC
PALLFDIDPTKPASIIVIVTTVLMVVAMTKCFKSKDRRRTHQPVARQTLC
DADTCAPCKEMGPCSKSPLDAPESAPSRSRIKIATESWSESTQTREVRES
PPPSQVRRPTKKLARKIHRPFKPTPSQAKLCESLYDRWGGQLNKVATASA
EVKASGLTASELSLQFCHIKRERALSSNNASARVPPASPVTMPTPGTLAA
SGARAGAEVRIQGTQAGRRSLRPQRDLHGRETPTKIPVLSRRPPYRSPPR
ASKNKAPMLGLAPKEKGAGSSPSRSPPERSTPKKRGRPSAAELAR* back to topmRNA from alignment at D-mesarthrocarpus_Contig10091:1172..3810- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-mesarthrocarpus_Contig10091.2.1 ID=mRNA_D-mesarthrocarpus_Contig10091.2.1|Name=mRNA_D-mesarthrocarpus_Contig10091.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2639bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10091:1172..3810- (Discosporangium mesarthrocarpum MT17_79)
AGAAACCCTGAGGTTACTCTAAAGGGCCTGTCCAGATGTATCCACTCGCG
ACAAATGAGAACGAGTTGTCAGATGATTATAATAAACTGAATCCTGCAGA
AATCCTGGTAGAGGGTTTCAAGGGGGCACCAGAGGGGGAAAAGATACAGG
CCAAGCAAGGTTCAAATTCGGGTACGGAGGAGTGCCCCGCGTTGCTCTTC
GATATCGATCCAACTAAGCCTGCTTCAATCATCGTGATCGTTACAACAGT
TTTAATGGTGGTCGCAATGACGAAATGCTTCAAAAGCAAAGATAGACGGA
GGACCCACCAGCCCGTAGCCAGGCAGACTCTATGCGACGCTGACACTTGC
GCCCCGTGCAAAGAAATGGGACCCTGCTCGAAATCTCCTCTGGATGCTCC
AGAATCAGCACCCTCTCGATCGAGAATCAAAATTGCTACCGAGAGTTGGT
CTGAATCAACGCAGACGAGAGAAGTAAGGGAATCACCACCACCCAGCCAA
GTACGGCGACCCACGAAGAAGTTGGCGCGGAAGATACACCGTCCTTTCAA
GCCCACCCCCTCGCAGGCGAAGTTATGCGAGAGCCTATATGACAGATGGG
GAGGACAGCTGAATAAGGTTGCCACAGCGAGCGCAGAGGTTAAGGCCAGT
GGATTGACGGTGCGTGTGCTCCATCTTTATTTTCATTTTATGTACAGTTA
CTGAGTTTAGAGTAAATTGACCGTCCATGTAAACAAATTTCCATATCCTT
CATCCTCCCCCTCAACCCCGCCTAGTTGCAATATGAGCATTCTCCATGGT
GACACAGAATGAAGTCGTTGCCATGGTACACCTTACGGTTTACGTCGTCT
CGCTGTGATGTTTGAGTTGCCTGCAAACTTGAACAAGAAGATAGGTTTTA
TTTTGTTTGATTATGGAAAGGGGTATGGTATCTTTCTACCTTGTCACCCC
CAGTTACCATTGATCATGTGTGTCTCTCTCACCATGAGCTTCACCGACAG
TTATGGGGTACACCATTGCTGAGCAGATTCGGCTCCATTGCCCAGTTGCT
GTTTTCGTTGAGAGATTGTGTGGACCACATGACCAGCTCAGACGCATCTT
CTTGGTAGCAGAGGACACACGCATGCAACACAGGGATGTGGCCCGAGGAG
GATGTATATTTAATACGCATGTGCACGTATCCACGTGCTTTCTCTGGCTC
TTTTCCGCTGCACCTAGCACACATGTCTTCCGCAATCTCTTCACGCACCT
TTTTTTTGTCAAAAGGCCTCGGAGCTGTCTCTTCAATTCTGTCACATCAA
GCGGGAGAGAGCCTTGTCTAGCAACAATGCCTCTGCTCGGGTCCCTCCGG
CCTCGCCGGTGACAATGCCTACTCCCGGAACATTGGCAGCTTCAGGGGCC
AGGGCAGGGGCGGAGGTACGCATCCAGGTATCGGTGCTTTTGCAGTTTGT
GTCCAGGTGGAGTGTTCTTTCATGCTTTGAAGGGGGTGGGTGGGGGCAGG
TCAAGCGGGAATTATGGCTCGCAGCAGTACCAGGCGGGCTATGCTAGAAA
CTATGTGGCTCCAAGTATCTTGTTTTAAGTATGCCATGTTGTTGTTCAAC
ACAGGCTCATCAGAAGGTGTAGCTAGAGCTCAGAGTTATCAACTGCAACA
AGGTCTACGACCCGAGGTGTTTCTCCAGTGGTGGGTGGGGGGAGACAAGA
GACGCACCGGGTTGGTTCGAGAAGACGCGCGCTCTTTTTATTTGATGGGT
GAAGGGTGCAGGTCAGCGGGTTAACCGGGAAGGCTTGATGCTGCCAAGAG
CCTGCCAACGTCAAGTGATGCCAGGAACTTCAGCCCTGAGGTACTACATG
CACAGCCCCAGAGCACTTCAAAGGGTTTGCACACAAGGCACATGGCACAT
GCATCCGTGCATAGCGGTTAGGGATAGGTTTTTTTTCCGTAATTCATGCA
CGCACATGCATCGGCACAAGGCTTCTTGGTTTCGAGAGGAGCTGTGCTCG
ATACAACTCCGATTCACTCAGTCCCGCTTCACTCTGCCCCTCCTGCTCTC
TCATCTGCTACCTGACACCGGGTGTGTCTGACATCCACAGGGTACCCAAG
CTGGGAGGCGTTCACTCCGCCCACAGCGTGATTTGCACGGGAGAGAAACG
CCTACCAAGATCCCAGTGCTTTCCAGAAGACCTCCCTACCGGTCCCCGCC
GAGAGCATCCAAGAACAAGGCCCCCATGCTGGGACTTGCGCCCAAAGAGA
AGGGTGCTGGGTCTTCTCCGAGCAGATCACCACCAGAAAGATCAACACCC
AAGAAGAGAGGGAGGCCCTCAGCAGCCGAGCTGGCCAGGTGAGGCTTATG
ATGTCAGAGGTGGGCGAACGGACATGCATGTAAGTGCCACACCAGATCTC
TCTTGATGTCACATATGTTGAGCATAGTTGGATAGTCTGTGGCATCACTG
ACTACCTTGCCCCTTCAAAGCTTCCCATAACGCTTCTCAAGAGCCAGTTT
GAGGGTCTGAGGCGGTCAGCCGAGGCTGATTGGGTTGGTTGTGTTTGCCG
TCCCAGCTCACCTGCTGCACTCATGCCGCCACGATGCTCGTGTTCACCCT
CTCCTCAGGGAGTGCACAGCATGGCAGCTTTAAGAACCC back to topCoding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10091:1172..3810- >mRNA_D-mesarthrocarpus_Contig10091.2.1 ID=mRNA_D-mesarthrocarpus_Contig10091.2.1|Name=mRNA_D-mesarthrocarpus_Contig10091.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=1038bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10091:1172..3810- (Discosporangium mesarthrocarpum MT17_79)
ATGTATCCACTCGCGACAAATGAGAACGAGTTGTCAGATGATTATAATAA
ACTGAATCCTGCAGAAATCCTGGTAGAGGGTTTCAAGGGGGCACCAGAGG
GGGAAAAGATACAGGCCAAGCAAGGTTCAAATTCGGGTACGGAGGAGTGC
CCCGCGTTGCTCTTCGATATCGATCCAACTAAGCCTGCTTCAATCATCGT
GATCGTTACAACAGTTTTAATGGTGGTCGCAATGACGAAATGCTTCAAAA
GCAAAGATAGACGGAGGACCCACCAGCCCGTAGCCAGGCAGACTCTATGC
GACGCTGACACTTGCGCCCCGTGCAAAGAAATGGGACCCTGCTCGAAATC
TCCTCTGGATGCTCCAGAATCAGCACCCTCTCGATCGAGAATCAAAATTG
CTACCGAGAGTTGGTCTGAATCAACGCAGACGAGAGAAGTAAGGGAATCA
CCACCACCCAGCCAAGTACGGCGACCCACGAAGAAGTTGGCGCGGAAGAT
ACACCGTCCTTTCAAGCCCACCCCCTCGCAGGCGAAGTTATGCGAGAGCC
TATATGACAGATGGGGAGGACAGCTGAATAAGGTTGCCACAGCGAGCGCA
GAGGTTAAGGCCAGTGGATTGACGGCCTCGGAGCTGTCTCTTCAATTCTG
TCACATCAAGCGGGAGAGAGCCTTGTCTAGCAACAATGCCTCTGCTCGGG
TCCCTCCGGCCTCGCCGGTGACAATGCCTACTCCCGGAACATTGGCAGCT
TCAGGGGCCAGGGCAGGGGCGGAGGTACGCATCCAGGGTACCCAAGCTGG
GAGGCGTTCACTCCGCCCACAGCGTGATTTGCACGGGAGAGAAACGCCTA
CCAAGATCCCAGTGCTTTCCAGAAGACCTCCCTACCGGTCCCCGCCGAGA
GCATCCAAGAACAAGGCCCCCATGCTGGGACTTGCGCCCAAAGAGAAGGG
TGCTGGGTCTTCTCCGAGCAGATCACCACCAGAAAGATCAACACCCAAGA
AGAGAGGGAGGCCCTCAGCAGCCGAGCTGGCCAGGTGA back to top
|