mRNA_D-mesarthrocarpus_Contig10089.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Match: A0A6A5A6A6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6A6_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 9.650e-20 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 1 Query: 1 AVARPRMISD-GVWFDGKIGIWPIADTVAAMRSSKNRKKGTMMLTPAAIIAERYKDFMIDKVIPAIKARMP-RPPGHTVFVQQDGAKPH 261 AVARPR + G F GKIG+WP + V A R+S+NR KGT++L P A+ AE Y+ ++DKV+PAI+A+MP R G +++QQD A PH Sbjct: 111 AVARPRFDHNKGSMFSGKIGVWPFVEQVVAQRNSRNRPKGTVLLVPQAVTAEVYRTMILDKVVPAIQAKMPQRVQGSLIYLQQDNASPH 199
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 93.6 bits (231), Expect = 3.780e-19 Identity = 50/108 (46.30%), Postives = 69/108 (63.89%), Query Frame = 2 Query: 281 EAIQAKAVDS--IILETQPANSPDLYVNDLGFFHSIQQLKEDVGVSSPEDMV*ATMEAFDVYPRETLERVWQSLFAVLGEVLASKGDNSYKLPHLGKENLGRTGKLPV 598 E +QA + D I L QP NSPDL V DLGFF SIQ L+ + ++ E++V A ++FD YP E L RV+ + + E++ KGDN YK+PH+GK+ L R G LP+ Sbjct: 234 EFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPL 341
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Match: UPI0007EF40B3 (uncharacterized protein LOC108194535 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF40B3) HSP 1 Score: 92.4 bits (228), Expect = 1.920e-18 Identity = 45/97 (46.39%), Postives = 62/97 (63.92%), Query Frame = 2 Query: 308 SIILETQPANSPDLYVNDLGFFHSIQQLKEDVGVSSPEDMV*ATMEAFDVYPRETLERVWQSLFAVLGEVLASKGDNSYKLPHLGKENLGRTGKLPV 598 +I L QPANSPDL +NDLGFF IQ L+ + ++ ++V A +EA++ TL VW SL + E+L G+N+YKLPH+GK L R G+LP Sbjct: 336 NITLANQPANSPDLNINDLGFFRVIQGLQHEKAPTTVCELVGAVLEAYEEVSDSTLNHVWLSLMGCMTEILRKDGNNNYKLPHIGKGKLERLGQLPT 432
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Match: A0A6A4Z6G2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z6G2_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.250e-18 Identity = 47/88 (53.41%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 1 AVARPRMISDGV-WFDGKIGIWPIADTVAAMRSSKNRKKGTMMLTPAAIIAERYKDFMIDKVIPAIKARMPRPPGHTVFVQQDGAKPH 261 AVARPR + FDGKIGIWP + VAA+RSSKNR KGT+ LT ++ A+ Y+D ++++V+PAI+ +MPR G V +QQD A PH Sbjct: 20 AVARPRYDAHKKQMFDGKIGIWPFVEEVAAVRSSKNRPKGTLELTTQSVNADVYQDMVMNEVVPAIQVKMPR--GVVVKLQQDNASPH 105
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Match: A0A6A5AB40_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AB40_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 4.450e-17 Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 1 AVARPRMISD-GVWFDGKIGIWPIADTVAAMRSSKNRKKGTMMLTPAAIIAERYKDFMIDKVIPAIKARMPRPPGHTVFVQQDGAKPH 261 A+AR R D G W DGKIG W + V +R S+ R GTM+ P ++ E YK ++DKVIPAIKA+ P+ V +QQD +KPH Sbjct: 48 AIARLRWDHDKGEWLDGKIGTWHFTERVPTLRGSRKRPAGTMVTNPVSVTREVYKTMLLDKVIPAIKAKWPKGETKGVIIQQDNSKPH 135
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Match: A0A6A4ZTP8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZTP8_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 1.110e-16 Identity = 43/89 (48.31%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 1 AVARPR--MISDGVWFDGKIGIWPIADTVAAMRSSKNRKKGTMMLTPAAIIAERYKDFMIDKVIPAIKARMPRPPGHTVFVQQDGAKPH 261 AVARPR +W DGKIG WP + A R SKNR KG + P + + Y+ ++IDKVIPAIK++ P HT+++QQD AKPH Sbjct: 48 AVARPRWDFKRHRMW-DGKIGTWPFIEHTVAQRRSKNRDKGAPITKPMNVTKKVYRQYLIDKVIPAIKSQWPGQHHHTIYLQQDNAKPH 135
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Match: W4GSH9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GSH9_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.420e-16 Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 1 AVARPRMISDGVWFDGKIGIWPIADTVAAMRSSKNRKKGTMMLTPAAIIAERYKDFMIDKVIPAIKARMPRPPGHTVFVQQDGAKPH 261 AVA PR +DGKIGIWP + VAA+RSSKNR KGT+ LT ++ A+ Y+D ++++V+PAI+ +MPR G V +QQD A PH Sbjct: 122 AVACPR-------YDGKIGIWPFVEEVAAVRSSKNRPKGTLELTTQSVNADVYQDMVMNEVVPAIQVKMPR--GVVVKLQQDNASPH 199
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Match: A0A485LTD1_9STRA (Aste57867_25464 protein n=4 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LTD1_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.470e-16 Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 1 AVARPRMISD-GVWFDGKIGIWPIADTVAAMRSSKNRKKGTMMLTPAAIIAERYKDFMIDKVIPAIKARMPRPPGHTVFVQQDGAKPH 261 AVARPR I D G+W+DGKIG WP ++V A R+S NR GT P + + Y++F+IDKV+PAI A+ P+ TV +Q D A+ H Sbjct: 212 AVARPRYIHDTGLWWDGKIGTWPFVESVTAQRASVNRPAGTYETKPITVTKDVYREFIIDKVLPAIAAKWPKI-DRTVLLQHDNARAH 298
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Match: V9FYR7_PHYPR (Uncharacterized protein (Fragment) n=4 Tax=Phytophthora parasitica TaxID=4792 RepID=V9FYR7_PHYPR) HSP 1 Score: 82.8 bits (203), Expect = 2.110e-16 Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 4 VARPRM-ISDGVWFDGKIGIWPIADTVAAMRSSKNRKKGTMMLTPAAIIAERYKDFMIDKVIPAIKARMPRPPGHTVFVQQDGAKPH 261 VARPR FDGKIGIWPI + + A+RSS NR KGTM+ ++ Y+ F+++KV P+I+A+MP TV VQQD A PH Sbjct: 60 VARPRYDFHRKQHFDGKIGIWPIVEKIEALRSSINRPKGTMITKNVSMTRTLYRKFLVEKVFPSIRAKMPARRWSTVVVQQDNAGPH 146
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Match: W4FF64_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF64_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.230e-16 Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 1 AVARPRMISD-GVWFDGKIGIWPIADTVAAMRSSKNRKKGTMMLTPAAIIAERYKDFMIDKVIPAIKARMPRPPGHTVFVQQDGAKPH 261 AVARPR GV FDGKIG+WP D V A+RSS+NR GT++ T + A Y+D++I+KV+PAIKA P V +QQD A PH Sbjct: 188 AVARPRFDEGRGVLFDGKIGMWPFVDLVPAVRSSRNRPAGTLVTTLVNVNANVYRDYVINKVVPAIKASFPST-NKRVILQQDNATPH 274 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10089.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10089.2.1 >prot_D-mesarthrocarpus_Contig10089.2.1 ID=prot_D-mesarthrocarpus_Contig10089.2.1|Name=mRNA_D-mesarthrocarpus_Contig10089.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=109bp MISDGVWFDGKIGIWPIADTVAAMRSSKNRKKGTMMLTPAAIIAERYKDFback to top mRNA from alignment at D-mesarthrocarpus_Contig10089:3931..4528- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10089.2.1 ID=mRNA_D-mesarthrocarpus_Contig10089.2.1|Name=mRNA_D-mesarthrocarpus_Contig10089.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=598bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10089:3931..4528- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10089:3931..4528- >mRNA_D-mesarthrocarpus_Contig10089.2.1 ID=mRNA_D-mesarthrocarpus_Contig10089.2.1|Name=mRNA_D-mesarthrocarpus_Contig10089.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=327bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10089:3931..4528- (Discosporangium mesarthrocarpum MT17_79)back to top |