mRNA_D-mesarthrocarpus_Contig1008.3.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1008.3.1 vs. uniprot
Match: A0A6H5KYC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYC3_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 1.160e-11 Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 389 SLGGLEQLPGLVTGLMFKHTSEAERMMRLASALAGQMRSQVSRVQAILSDAWQLHLSETAAGRSSPSMPGRTHPPPTTPCSRTTS 643
+LGGLE+LPG L+ KHT+E ER+MRL AL QMR QVSRV+ +L++AWQLH S+ A P P P PT P +++ S
Sbjct: 95 NLGGLEKLPGCRELLIHKHTTELERVMRLWRALVRQMRGQVSRVEELLAEAWQLHRSDPARALRQPRHPPPPSPSPTLPTAQSRS 179
BLAST of mRNA_D-mesarthrocarpus_Contig1008.3.1 vs. uniprot
Match: D7FPK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPK5_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 1.960e-10 Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 389 SLGGLEQLPGLVTGLMFKHTSEAERMMRLASALAGQMRSQVSRVQAILSDAWQLHLSETAAGRSSPSMPGRTHPPPTTP 625
+LGGLE+LPG L+ KHT+E ER+MRL AL QMR QVSRV+ +L++ WQLH S+ A P P P P P
Sbjct: 95 NLGGLEKLPGCRELLILKHTTELERVMRLWRALVRQMRGQVSRVEELLAEGWQLHRSDPARALLQPRHPAPPSPSPPLP 173 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1008.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1008.3.1 >prot_D-mesarthrocarpus_Contig1008.3.1 ID=prot_D-mesarthrocarpus_Contig1008.3.1|Name=mRNA_D-mesarthrocarpus_Contig1008.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=111bp MFKHTSEAERMMRLASALAGQMRSQVSRVQAILSDAWQLHLSETAAGRSSback to top mRNA from alignment at D-mesarthrocarpus_Contig1008:5776..7144- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1008.3.1 ID=mRNA_D-mesarthrocarpus_Contig1008.3.1|Name=mRNA_D-mesarthrocarpus_Contig1008.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1369bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1008:5776..7144- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1008:5776..7144- >mRNA_D-mesarthrocarpus_Contig1008.3.1 ID=mRNA_D-mesarthrocarpus_Contig1008.3.1|Name=mRNA_D-mesarthrocarpus_Contig1008.3.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=333bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1008:5776..7144- (Discosporangium mesarthrocarpum MT17_79)back to top |