mRNA_D-mesarthrocarpus_Contig10079.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Match: A0A7C1U4G8_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonadales bacterium TaxID=1978525 RepID=A0A7C1U4G8_9SPHN) HSP 1 Score: 221 bits (563), Expect = 1.760e-66 Identity = 135/274 (49.27%), Postives = 161/274 (58.76%), Query Frame = 1 Query: 1 GRLPAGLDRGSTSTGTSSITDIMTIPSSVTRRAVVQARQGQQSDFFYVRRLVPTAAGINLGAGAGVPVLVVVTCRLTGGTSRTPLSLTEVILYGKEKARDDRVLLIRVTPENLKTGRVQADIRYTGTGVMSGWWEVRTPSDPPVQELDRFTEGSISEAQRRQQRRFQRVKRFRIQMPLSGRITLRGPDYKALPKASPGDYEVLLRVEASRDREALS-----------------TLAAAGGSTNL-------------FSGAAAGFPLPALEYRI 732 GRLP DRGSTS S+ITDIMTIP SV R AV QARQG SDFFYVRR P +LGAG GV V V VTCRL GGTSRTPLS + V + G + +I + P+NL+TGRV A + YTG G + GWWEVR P DP + LD E S+++A+R +Q RF RVK F I +P +G L GP Y LP G Y +LLR++ SRDREALS +L A G + L FSG AAGFP+ LEYR+ Sbjct: 71 GRLPVAFDRGSTSVARSNITDIMTIPFSVVRTAVSQARQGAFSDFFYVRRFSPVG-NADLGAGPGVDVFVSVTCRLAGGTSRTPLSFSNVKIMGLDDNNATGQKIITLDPKNLETGRVIAKLEYTGRGQLQGWWEVRRPGDPEITPLDLLPEASLTQAERAKQTRFFRVKYFNITLPNTGSYDLVGPAYSELPANLGGAYRLLLRLKVSRDREALSNLTILPAAPVPPVTPPPSLGATGAAKKLRATTPATTEPRLSFSGGAAGFPIFPLEYRV 343
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Match: UPI0002484A66 (hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 TaxID=310037 RepID=UPI0002484A66) HSP 1 Score: 161 bits (407), Expect = 1.430e-43 Identity = 106/246 (43.09%), Postives = 140/246 (56.91%), Query Frame = 1 Query: 1 GRLPAGLDRGSTSTGTS--SITDIMTIPSSVTRRAVVQARQGQQSDFFYVRRLVPTAAGINLGAGAGVPVLVVVTCRLTGGTSRTPLSLTEVILYGKEKARDDRVLLIRVTPENLKTGRVQADIRYTGTGVMSGWWEVRTPSDPPVQELDRFTEGSISEAQRRQQRRFQRVKRFRIQMPLSGRITLRGPDYKALPKASPGDYEVLLRVEASRDREALSTLAAAGGSTNLFSGAAAGFPLPALEYRI 732 GRLP+ + ST +G + ++TDIMTIP S+ RRA A +G S+FFYVRR V + G V VTCRL GG +RTPL+LT V K + + I V P N + +QA IRY G+G++ G WEV P +PP DR TE S+ QR QRR+ V+RF +P +G+ L GPD LPK++ G + +LLR+EA+ DRE S G + SG AGFPLP L Y + Sbjct: 92 GRLPSRSNL-STRSGPNGQNLTDIMTIPPSIARRAYQDALRGNSSEFFYVRRFV---------SANGPDEFVAVTCRLAGGGARTPLALTNV----KLEFANSSTKTITVIPRNSEVPPIQAQIRYNGSGLLKGRWEVVLPGEPPPSRRDRLTEASLPIEQRGTQRRYTLVERFSRFLPPTGQAVLEGPDPSRLPKSASGLHLILLRIEATADREGNSLT----GFGTVNSGGVAGFPLPILRYYV 319
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Match: A0A3E0P1Y7_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3E0P1Y7_9BACT) HSP 1 Score: 157 bits (396), Expect = 8.280e-42 Identity = 100/244 (40.98%), Postives = 137/244 (56.15%), Query Frame = 1 Query: 1 GRLPAGLDRGSTSTGTSSITDIMTIPSSVTRRAVVQARQGQQSDFFYVRRLVPTAAGINLGAGAGVPVLVVVTCRLTGGTSRTPLSLTEVILYGKEKARDDRVLLIRVTPENLKTGRVQADIRYTGTGVMSGWWEVRTPSDPPVQELDRFTEGSISEAQRRQQRRFQRVKRFRIQMPLSGRITLRGPDYKALPKASPGDYEVLLRVEASRDREALSTLAAAGGSTNLFSGAAAGFPLPALEYRI 732 GRLP D+ + + + TDIM+IP SV RRA A +G+ S FFYVRR V T G + V VTCR+ GG +R PL+LT+V E DD + RV ++ + +A+I Y GTG + G WEV P + P D TE S+ +R QRR+ ++RF + +P +GR L GPD ++P G Y +LLR+EAS D+E S L GG+ + SGA AGFP+P L Y + Sbjct: 106 GRLPIRFDQSTLNDQATVFTDIMSIPPSVARRAYQAAVRGETSSFFYVRRFVSTTGGPD--------EYVFVTCRMAGGGARVPLALTDV-----EVRFDDDSTVKRVDRDS-RVPPFEAEIVYNGTGRLRGRWEVVLPGEEPPSTRDLLTEASLPPEERPTQRRYSVLRRFDVFLPPTGRTVLPGPDPDSVPTTVDGLYRILLRIEASDDKEGDSNLGNIGGNGVIHSGAVAGFPMPVLRYAV 335
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Match: A0A0T7BZC8_9CYAN (Uncharacterized protein n=2 Tax=Calothrix sp. 336/3 TaxID=1337936 RepID=A0A0T7BZC8_9CYAN) HSP 1 Score: 154 bits (390), Expect = 2.720e-41 Identity = 109/246 (44.31%), Postives = 137/246 (55.69%), Query Frame = 1 Query: 1 GRLP--AGLDRGSTSTGTSSITDIMTIPSSVTRRAVVQARQGQQSDFFYVRRLVPTAAGINLGAGAGVPVLVVVTCRLTGGTSRTPLSLTEVILYGKEKARDDRVLLIRVTPENLKTGRVQADIRYTGTGVMSGWWEVRTPSDPPVQELDRFTEGSISEAQRRQQRRFQRVKRFRIQMPLSGRITLRGPDYKALPKASPGDYEVLLRVEASRDREALSTLAAAGGSTNLFSGAAAGFPLPALEYRI 732 GRLP + L R S G ++ TDIMTIP SV RRA A +G S+FFYVRR V T G + V VTCRL GG +R PL+LT V L + D+ VT E L + A I Y GTG + G WEV P DPP + D TE S+ +R +QRR+ +++RF + +P G+ L GPD + LPK S G + +LLRVEA+ DRE S G N SGA AGF LP L Y + Sbjct: 73 GRLPLRSNLSRPS---GNNNFTDIMTIPPSVARRAYQDAARGNSSEFFYVRRFVSTTGGAD--------EFVAVTCRLAGGGARVPLALTNVEL----RFAGDKPTPAVVTGETLP--QFNATISYNGTGRLKGRWEVVLPGDPPPSQRDLLTEASLPVEERPRQRRYSQLQRFDVFLPPVGKTILPGPDPRNLPKGSSGLHMILLRVEATDDREGNSDTGV--GIVN--SGAVAGFTLPVLRYFV 297
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Match: A0A831T5Z7_9BACT (Uncharacterized protein n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A831T5Z7_9BACT) HSP 1 Score: 154 bits (390), Expect = 3.670e-41 Identity = 99/226 (43.81%), Postives = 132/226 (58.41%), Query Frame = 1 Query: 58 TDIMTIPSSVTRRAVVQARQGQQSDFFYVRRLVPTAAGINLGAGAGVPVLVVVTCRLTGGTSRTPLSLTEVILYGKEKARDDRVLLIRVTPENLKTGRVQADIRYTGTGVMSGWWEVRTPSDPPVQELDRFTEGSISEAQRRQQRRFQRVKRFRIQMPLSGRITLRGPDYKALPKASPGDYEVLLRVEASRDREALSTLAAAG-GSTNLFSGAAAGFPLPALEYRI 732 TDIM+IP SV RRA A++G S FFYVRR + A G + VPV TCR++GG +RTP +LT+V L K D VLLI+ + ++A+I Y GTG + G WEV P + P E D TE ++ +R QQRR+ ++ RF + +P +G+ L GPD LP G Y VLLR+EA+ D+E S LA G G + SGA AGFP+P L Y + Sbjct: 92 TDIMSIPPSVARRAYQAAQEGVTSSFFYVRRFINPAGGPD----EYVPV----TCRMSGGGARTPFALTDVKLSFKV---DKPVLLIK---SGDRLPPIRAEIAYNGTGRLKGRWEVVLPGEEPPSERDFLTEATLPIEERSQQRRYTQLSRFNVFLPATGKYVLPGPDISRLPTTIEGQYLVLLRIEATDDKEGDSNLAVTGTGPGVVHSGAVAGFPIPPLRYGV 303
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Match: W0RE93_9BACT (Uncharacterized protein n=2 Tax=Gemmatirosa kalamazoonesis TaxID=861299 RepID=W0RE93_9BACT) HSP 1 Score: 153 bits (387), Expect = 2.950e-40 Identity = 107/245 (43.67%), Postives = 138/245 (56.33%), Query Frame = 1 Query: 1 GRLPAGLDRGSTSTGTSSITDIMTIPSSVTRRAVVQARQGQQSDFFYVRRLVPTAAGINLGAGAGVPVLVVVTCRLTGGTSRTPLSLTEVILYGKEKARDDRVLLIRVTPENLKTGRVQADIRYTGTGVMSGWWEVRTPSDPPVQELDRFTEGSISEAQRRQQRRFQRVKRFRIQMPLSGRITLRGPDYKALPKASPGDYEVLLRVEASRDREALSTLAAA-GGSTNLFSGAAAGFPLPALEYRI 732 G+LP D TS GT ++TD+MTIP SV RRA A+ G+ + FFYVRR V G + V V VTCRLT G + PL+LT+V L D V+ + P+ + AD+ YTGTG + G WEV P D P E D E S+ QR QRR+ + RF + +P +GR+ + GPD +LP+ + G Y VL RVEAS D +A S LAA GS + SGA AGF LP L Y + Sbjct: 127 GQLPLRFDLARTS-GTGALTDVMTIPPSVARRAWQAAQAGRPAAFFYVRRFVDRRGGPD--------VFVAVTCRLTAGGAGVPLALTDVRLAFDS---DAPVVAVAGGPDG-SAPPLFADVLYTGTGRLQGRWEVVRPGDDPPSESDLLPEASLPLEQRGTQRRWAPLARFDVFLPPNGRVRVPGPDPASLPRDADGTYLVLFRVEASADPDARSDLAAVRAGSGVVTSGAVAGFALPTLRYVV 358
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Match: A0A1Y0RG15_9CYAN (Uncharacterized protein n=1 Tax=Nostocales cyanobacterium HT-58-2 TaxID=1940762 RepID=A0A1Y0RG15_9CYAN) HSP 1 Score: 152 bits (383), Expect = 3.890e-40 Identity = 103/244 (42.21%), Postives = 135/244 (55.33%), Query Frame = 1 Query: 1 GRLPAGLDRGSTSTGTSSITDIMTIPSSVTRRAVVQARQGQQSDFFYVRRLVPTAAGINLGAGAGVPVLVVVTCRLTGGTSRTPLSLTEVILYGKEKARDDRVLLIRVTPENLKTGRVQADIRYTGTGVMSGWWEVRTPSDPPVQELDRFTEGSISEAQRRQQRRFQRVKRFRIQMPLSGRITLRGPDYKALPKASPGDYEVLLRVEASRDREALSTLAAAGGSTNLFSGAAAGFPLPALEYRI 732 GRLP +RG T +G ++ TDIMTIP SV RRA A +G +FFYVRR V T G + V VTCRL G ++R P SLT V L + D V+L +NL RVQADIRY G+G + G WEV P D P D E S+ QR QRR+ ++ + +P +GR+ L GPD LP + G + +LLRVEA+ D +A ++ G +F+G AG PLP L Y + Sbjct: 76 GRLPRRYNRG-TPSGPNNYTDIMTIPPSVARRAYQDAARGNSPEFFYVRRFVSTTGGPD--------EYVAVTCRLAGSSARIPFSLTNVRLRFD---KSDPVVLGVARGQNLP--RVQADIRYNGSGRLKGRWEVVQPGDTPPNTRDLLPEASLPPEQRALQRRYTLIEPVDVFLPPTGRVILPGPDPSKLPTTAGGLHLILLRVEATNDADAANSQTGFG---TVFTGGVAGSPLPVLRYYV 302
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Match: UPI0019FF667C (Uncharacterized protein n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI0019FF667C) HSP 1 Score: 149 bits (376), Expect = 2.320e-39 Identity = 102/244 (41.80%), Postives = 134/244 (54.92%), Query Frame = 1 Query: 1 GRLPAGLDRGSTSTGTSSITDIMTIPSSVTRRAVVQARQGQQSDFFYVRRLVPTAAGINLGAGAGVPVLVVVTCRLTGGTSRTPLSLTEVILYGKEKARDDRVLLIRVTPENLKTGRVQADIRYTGTGVMSGWWEVRTPSDPPVQELDRFTEGSISEAQRRQQRRFQRVKRFRIQMPLSGRITLRGPDYKALPKASPGDYEVLLRVEASRDREALSTLAAAGGSTNLFSGAAAGFPLPALEYRI 732 GRLP D S G ++ TDIMTIP+SV+RRA A +G +SDFFYVRR V G + V VTCRL GG +R PLSLT V L K D + + T E+L + A+IR+ GTG + G WEV P DP D TE ++ QR QRR+ +++RF + +G+ L GPD PK S G + +LLR+EA+ DRE S + + +G AGFP+P L Y I Sbjct: 58 GRLPLRSDLSRLS-GQNNFTDIMTIPASVSRRAYQDALRGNRSDFFYVRRFVNPTTGQS--------EFVAVTCRLAGGGARVPLSLTNVQL----KFADGQPVPAITTGESLP--KFGAEIRFNGTGRLKGRWEVVLPGDPLPTREDLLTEATLPIEQRALQRRYTQLERFDTFLQPTGKFFLPGPDPSRFPKGSVGAHLILLRIEATDDREGNSDIGTPNQGRAISNGGVAGFPMPVLRYFI 286
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Match: A0A3M1A686_9BACT (Uncharacterized protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M1A686_9BACT) HSP 1 Score: 149 bits (377), Expect = 2.720e-39 Identity = 101/244 (41.39%), Postives = 128/244 (52.46%), Query Frame = 1 Query: 1 GRLPAGLDRGSTSTGTSSITDIMTIPSSVTRRAVVQARQGQQSDFFYVRRLVPTAAGINLGAGAGVPVLVVVTCRLTGGTSRTPLSLTEVILYGKEKARDDRVLLIRVTPENLKTGRVQADIRYTGTGVMSGWWEVRTPSDPPVQELDRFTEGSISEAQRRQQRRFQRVKRFRIQMPLSGRITLRGPDYKALPKASPGDYEVLLRVEASRDREALSTLAAAGGSTNLFSGAAAGFPLPALEYRI 732 GRLP D S S TDIM+IP SV RRA A+QGQ S FFYVRR G + V VTCR+TGG +R P +L +V K D L + + + A+I Y GTGV+ G WEV P D P D E S+ +R QRR+ + RF + +P G+ L GP K LP G Y ++LR+EAS D+EA S LA+ GGS + +GA AGFPLP Y + Sbjct: 70 GRLPIRYDL-SRLNPDGSYTDIMSIPPSVARRAYQAAQQGQDSQFFYVRRFSSLKGGPD--------EYVAVTCRMTGGGARVPFALLDV------KITTDTDLPVYFVKKGTHPPQPVAEIYYNGTGVLKGRWEVVLPGDEPPTGRDLLPEASLPINERGTQRRYTEISRFNVFLPPVGKYILTGPKPKKLPSEMEGLYMLILRIEASDDKEADSNLASVGGSGLVHNGAVAGFPLPPFRYFV 298
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Match: A0A7Y2HPJ7_9BACT (Uncharacterized protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2HPJ7_9BACT) HSP 1 Score: 149 bits (377), Expect = 4.380e-39 Identity = 105/247 (42.51%), Postives = 132/247 (53.44%), Query Frame = 1 Query: 1 GRLPAGLDRGSTSTGTSSITDIMTIPSSVTRRAVVQARQGQQSDFFYVRRLVPTAAGINLGAGAGVPVLVVVTCRLTGGTSRTPLSLTEVILYGKEKARDDRVLLIRV--TPENLKTGRVQADIRYTGTGVMSGWWEVRTPSDPPVQELDRFTEGSISEAQRRQQRRFQRVKRFRIQMPLSGRITLRGPDYKALPKASPGDYEVLLRVEASRDREALSTLAAAGGSTNLF-SGAAAGFPLPALEYRI 732 G LP +G S G TDIM+IP SV RRA A G +S FFYVRR V G V VTCR+ GG +R PL+L +V L A D VL + P L QA+IRY GTG + G WEV P + P D TE ++ R QRR+ ++RF + +P +G I L GPD + LP G Y+VLLR+EAS D+E S LAAAG + +GA AGFP+P L Y + Sbjct: 96 GSLPLRFAQGRPS-GQQGFTDIMSIPPSVARRAYQAALDGDESSFFYVRRFVDPQ-------GIRPDQFVSVTCRMAGGGARVPLALLDVRLGF---ATDGAVLAVAAGDVPPPL-----QAEIRYNGTGALVGRWEVVMPGEDPPTAADLLTEATLPVELRGTQRRYTELERFNVFLPPTGEIVLPGPDVRTLPTDRSGMYQVLLRIEASDDKEGDSDLAAAGAGAGVVPAGAVAGFPIPPLRYFV 326 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10079.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10079.1.1 >prot_D-mesarthrocarpus_Contig10079.1.1 ID=prot_D-mesarthrocarpus_Contig10079.1.1|Name=mRNA_D-mesarthrocarpus_Contig10079.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=244bp GRLPAGLDRGSTSTGTSSITDIMTIPSSVTRRAVVQARQGQQSDFFYVRRback to top mRNA from alignment at D-mesarthrocarpus_Contig10079:2..733+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10079.1.1 ID=mRNA_D-mesarthrocarpus_Contig10079.1.1|Name=mRNA_D-mesarthrocarpus_Contig10079.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=732bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10079:2..733+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10079:2..733+ >mRNA_D-mesarthrocarpus_Contig10079.1.1 ID=mRNA_D-mesarthrocarpus_Contig10079.1.1|Name=mRNA_D-mesarthrocarpus_Contig10079.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=732bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10079:2..733+ (Discosporangium mesarthrocarpum MT17_79)back to top |