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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Seed ortholog | 2880.D8LSX6 |
| PFAMs | Ank,Ank_2,Ank_3,Ank_4,Ank_5 |
| Model size | 802 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K15504 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Evalue | 3.9e-07 |
| EggNOG OGs | COG0666@1|root,KOG4412@2759|Eukaryota |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-26_001790.1 |
| Description | proteasome regulatory particle assembly |
| Cds size | 693 |
| COG category | L |
| BRITE | ko00000,ko01009,ko03400 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789153.2344725-UTR-D-mesarthrocarpus_Contig10077:2806..2915 | 1680789153.2344725-UTR-D-mesarthrocarpus_Contig10077:2806..2915 | Discosporangium mesarthrocarpum MT17_79 | UTR | D-mesarthrocarpus_Contig10077 2807..2915 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789153.2489069-CDS-D-mesarthrocarpus_Contig10077:2915..3266 | 1680789153.2489069-CDS-D-mesarthrocarpus_Contig10077:2915..3266 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig10077 2916..3266 + |
| 1680789153.2615757-CDS-D-mesarthrocarpus_Contig10077:3508..3715 | 1680789153.2615757-CDS-D-mesarthrocarpus_Contig10077:3508..3715 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig10077 3509..3715 + |
| 1680789153.2718718-CDS-D-mesarthrocarpus_Contig10077:4121..4256 | 1680789153.2718718-CDS-D-mesarthrocarpus_Contig10077:4121..4256 | Discosporangium mesarthrocarpum MT17_79 | CDS | D-mesarthrocarpus_Contig10077 4122..4256 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10077.2.1 >prot_D-mesarthrocarpus_Contig10077.2.1 ID=prot_D-mesarthrocarpus_Contig10077.2.1|Name=mRNA_D-mesarthrocarpus_Contig10077.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=231bp
MVSPSSSPKRMNGPGQDDGPAQNTNEPRSCALLEACCNKNLSIAVNILEG
AVGEANQERDQLLRSEDDMRDTPLHLAASSGDDRIVNLLLTNGAEVNAED
NLGSTPLNRAAVTGHVEVIRLLLEHGADLEHLDDISGAALHAAARRNHSE
SCKILISHGADVNVSDGIGNRPLHLAAAEGAMSALQVLVENGADVSVCND
RGLSPLDMARSSWIGPHAQGKIAELLAGQGT back to topmRNA from alignment at D-mesarthrocarpus_Contig10077:2807..4256+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_D-mesarthrocarpus_Contig10077.2.1 ID=mRNA_D-mesarthrocarpus_Contig10077.2.1|Name=mRNA_D-mesarthrocarpus_Contig10077.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1450bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10077:2807..4256+ (Discosporangium mesarthrocarpum MT17_79)
TCCAGATATGCCTCTAGACCTATCCTATAAGGACATTCAATGGGCACAAC
AACCCTGAGTTTCCCTCCAGAAGTCTTCGTCTGAAACAATTACATTGCCG
AGATTTGAGATGGTGTCTCCGTCCTCGTCCCCCAAGAGAATGAACGGCCC
TGGACAGGACGACGGGCCGGCTCAAAACACAAACGAGCCGAGATCCTGTG
CCCTCCTCGAGGCTTGCTGCAACAAGAATTTGTCAATCGCTGTAAATATC
CTTGAGGGTGCAGTTGGTGAAGCCAACCAGGAACGTGACCAGCTTCTTCG
ATCTGAGGATGACATGCGGGACACTCCGTTGCACTTGGCTGCGAGTAGCG
GGGACGATAGGATCGTAAACCTCCTCCTTACGAACGGGGCCGAAGTCAAC
GCAGAGGACAACTTAGGCAGTACCCCCCTGAACCGTGCGGCAGTCACGGG
ACACGTTGAAGTGAGTGGTTGCTTCAATGCCAACCAAATCTCTCCATATT
TATTGCAGTGGGGTAGGCGTGAAGTGTTCGCAACGGACGAGGTCACTGGT
AGGACGGAGGGTGGGATTAGGTCAAAAGAGCCTGCCTGAAAATCCACTAT
CAATGTTAACTCATTGGATTTGATTGCAAAGTCTTCTGCGTGTGCGCCAC
AGCTCAGATCACATACACACACTCTCTCTCTGATCCGGGATCCATGGCGC
AGGTGATCCGCCTTCTGCTGGAGCACGGAGCTGACTTGGAGCATTTGGAC
GACATATCCGGAGCTGCACTCCATGCAGCCGCGCGCCGTAACCACTCAGA
GAGCTGCAAGATTCTGATTAGCCACGGGGCTGATGTGAACGTATCGGATG
GGATAGGGAATCGACCCCTGCACTTGGCCGCAGCGGAAGGGGCCATGTCT
GCATTGCAGGTAACTCTTGTCCATGTCATCCCTGCTTTGCTTCTCCCAGG
CCCGACCGACACTGGAAGCATGTCCTACTAGGTCACAAGTGGAGTACGTC
TTGGGGTCCTTCGTACTATGAAGCCCTCTTGCATTCGGGGTGTATGTGCT
GCTCGTGCAAGGTCCCGGCACAAAGTCCCTACTTCTTCCGGCTTGCAGTG
GTGCTTTAGCCCAGACTTGTTCCTTCTTCCTACCAAAGTTTTTTTTATAT
CTTTGGTCTGATCTAGGAAGCGTTCTTTGCACGGACTATGATGAACGACG
TACATTGTACCGTTTACAGCTCCCGAAACAACACTGGCAACCCCCCCCCA
ACGCAAGGGTAAAATACCGCCAAAATCATCTTTACATCTCCTTTTTCTGC
TGCGGTGCCTCACAGGTCCTGGTTGAGAATGGGGCTGATGTTAGTGTATG
CAACGACCGGGGCCTCTCCCCTCTTGATATGGCAAGGTCCAGCTGGATAG
GGCCTCATGCCCAGGGTAAAATCGCCGAGCTGCTGGCCGGCCAAGGTACG
back to topCoding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10077:2807..4256+ >mRNA_D-mesarthrocarpus_Contig10077.2.1 ID=mRNA_D-mesarthrocarpus_Contig10077.2.1|Name=mRNA_D-mesarthrocarpus_Contig10077.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=693bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10077:2807..4256+ (Discosporangium mesarthrocarpum MT17_79)
ATGGTGTCTCCGTCCTCGTCCCCCAAGAGAATGAACGGCCCTGGACAGGA
CGACGGGCCGGCTCAAAACACAAACGAGCCGAGATCCTGTGCCCTCCTCG
AGGCTTGCTGCAACAAGAATTTGTCAATCGCTGTAAATATCCTTGAGGGT
GCAGTTGGTGAAGCCAACCAGGAACGTGACCAGCTTCTTCGATCTGAGGA
TGACATGCGGGACACTCCGTTGCACTTGGCTGCGAGTAGCGGGGACGATA
GGATCGTAAACCTCCTCCTTACGAACGGGGCCGAAGTCAACGCAGAGGAC
AACTTAGGCAGTACCCCCCTGAACCGTGCGGCAGTCACGGGACACGTTGA
AGTGATCCGCCTTCTGCTGGAGCACGGAGCTGACTTGGAGCATTTGGACG
ACATATCCGGAGCTGCACTCCATGCAGCCGCGCGCCGTAACCACTCAGAG
AGCTGCAAGATTCTGATTAGCCACGGGGCTGATGTGAACGTATCGGATGG
GATAGGGAATCGACCCCTGCACTTGGCCGCAGCGGAAGGGGCCATGTCTG
CATTGCAGGTCCTGGTTGAGAATGGGGCTGATGTTAGTGTATGCAACGAC
CGGGGCCTCTCCCCTCTTGATATGGCAAGGTCCAGCTGGATAGGGCCTCA
TGCCCAGGGTAAAATCGCCGAGCTGCTGGCCGGCCAAGGTACG back to top
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