mRNA_D-mesarthrocarpus_Contig10067.2.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Match: A0A6H5JLQ4_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ4_9PHAE) HSP 1 Score: 125 bits (314), Expect = 4.420e-31 Identity = 59/63 (93.65%), Postives = 62/63 (98.41%), Query Frame = 1 Query: 151 MDGGLLEAAIGLGGQLSRWLKPTDFLPGSVVTFEMPSSGSKLFTLEVVGHDEYTRKLLEDKAS 339 MDGGLLEAAIGLGGQLSRWLKPTDFLPG+VVTFEMPSSGSKLFTLE++GHDEYTRKLLEDK S Sbjct: 1 MDGGLLEAAIGLGGQLSRWLKPTDFLPGTVVTFEMPSSGSKLFTLEILGHDEYTRKLLEDKGS 63
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Match: A0A7S1UHB1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHB1_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.910e-26 Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 1 LADDTLSVFEPPVRNSGVVGGLFLARGKYKKYIPA---IGQCKEGTRLSEKITMDGGLLEAAIGLGGQLSRWLKPTDFLPGSVVTFEMPSSGSKLFTLEVVGHDEYTRKLLEDKASFY 345 LADD +SV+EPP+RNSG+VGGLFL RGKYKK+I A IG + + + GG G GG LSRWL PTDF PG+++TFE +G L ++VG+DEYTRK++E + + Sbjct: 446 LADDVISVYEPPIRNSGIVGGLFLMRGKYKKHILAKDMIGNIE--------LPVGGG----KGGRGGCLSRWLVPTDFYPGAIITFEHGQTGQVLSAFKIVGYDEYTRKIVEGDRTLF 551
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Match: A0A4D9D193_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D193_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.080e-24 Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 1 Query: 7 DDTLSVFEPPVRNSGVVGGLFLARGKYKKYIPAIGQCKEGTRLSEKITMDGGLLEAAIGLGGQLSRWLKPTDFL-PGSVVTFEMPSSGSKLFTLEVVGHDEYTRKLLED 330 D T+S+FEP + NSGV GGLFLARGKYKKYI S K T + G ++ GLGG SR+L+P DFL VTFE+P++G++LFTL+ VG+DEYTRK+LED Sbjct: 346 DSTVSIFEPSIPNSGVDGGLFLARGKYKKYI------------SNKATGNTG--KSWEGLGGSHSRFLRPEDFLLTAPPVTFEVPATGARLFTLKTVGYDEYTRKILED 440
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Match: F0YC17_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC17_AURAN) HSP 1 Score: 99.8 bits (247), Expect = 5.520e-22 Identity = 50/111 (45.05%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 1 LADDTLSVFEPPVRNSGVVGGLFLARGKYKKYIPAIGQCKEGTRLSEKITMDGGLLEAAIGLGGQLSRWLKPTDFLPGSVVTFEMPSSGSKLFTLEVVGHDEYTRKLLEDK 333 L DDT+ V+EPPVRNSG+ GG+FL+RG+YKK+IP + + +K G G LSRWL+P DF G++V+FE P++G L T VV D+YT+++ E+K Sbjct: 927 LGDDTIMVYEPPVRNSGLEGGVFLSRGRYKKHIP------DQRSIGKK------------GAGSVLSRWLRPADFFDGNIVSFEAPATGRLLQTFRVVRADDYTKRVEEEK 1019
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Match: A0A8J2SX88_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SX88_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.470e-21 Identity = 51/117 (43.59%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 1 LADDTLSVFEPPVRNSGVVGGLFLARGKYKKYIPAIGQCKEGTRLSEKITMDGGLLEAAIGLGGQLSRWLKPTDFLPGSVVTFEMPSSGSKLFTLEVVGHDEYTRKLLEDKASFYGG 351 L DDT+ VFEPP+RNSG+ G+FL R +YKKY+P +EG L G LSRWL+P DF G++V FE PS+G L T V+G D +TR++ +K GG Sbjct: 418 LGDDTIMVFEPPIRNSGLEAGVFLGRQRYKKYVP---DQREGKGLKNH--------------GSVLSRWLRPADFYDGAIVPFEHPSTGRLLQTFRVIGADGFTRRIEAEKKQNAGG 517
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Match: A0A7S2CTV8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTV8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 3.190e-18 Identity = 48/110 (43.64%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 1 LADDTLSVFEPPVRNSGVVGGLFLARGKYKKYIPAIGQCKEGTRLSEKITMDGGLLEAAIGLGGQLSRWLKPTDFLPGSVVTFEMPSSGSKLFTLEVVGHDEYTRKLLED 330 LADDTLSVFEP VRNSG+ GG FL R +YKK+I GG A+ G LSRW +P+DF+ G+ VTFEMPS+G + +++ D T +++E+ Sbjct: 255 LADDTLSVFEPVVRNSGMKGGTFLNRMRYKKHITP---------------KQGGGRNASSRRSGLLSRWFRPSDFVKGADVTFEMPSTGCAVHRFKIIDIDPLTMQIIEE 349
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Match: UPI0014256511 (EF-hand domain-containing family member C2-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014256511) HSP 1 Score: 55.8 bits (133), Expect = 1.270e-6 Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 1 LADDTLSVFEPPVRNSGVVGGLFLARGKYKKYIPAIGQCKEGTRLSEKIT 150 L+DDT++VFEPPVRNSG++GG FL R + KK GQ GT+LSE T Sbjct: 456 LSDDTIAVFEPPVRNSGIIGGKFLERNRIKKP----GQPLFGTQLSEYYT 501
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Match: A0A7M7RHU7_STRPU (Uncharacterized protein n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7RHU7_STRPU) HSP 1 Score: 54.7 bits (130), Expect = 3.220e-6 Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 1 Query: 1 LADDTLSVFEPPVRNSGVVGGLFLARGKYKKYIPAIGQCKEGTRLSEKIT 150 L+DDT++VFEPP RNSG++GG FL RG+ KK Q + GT LS+ T Sbjct: 455 LSDDTVAVFEPPERNSGIIGGKFLERGRIKKP----NQARFGTELSDYFT 500
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Match: UPI0014551481 (EF-hand domain-containing family member C2-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014551481) HSP 1 Score: 54.7 bits (130), Expect = 3.220e-6 Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 1 Query: 1 LADDTLSVFEPPVRNSGVVGGLFLARGKYKKYIPAIGQCKEGTRLSE 141 L+DDT+SVFEPPVRNSG++GG FL R + KK Q + GT LSE Sbjct: 457 LSDDTISVFEPPVRNSGIIGGKFLERNRIKKP----NQERFGTELSE 499
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Match: A0A5D6Y2J2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2J2_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 3.360e-6 Identity = 39/115 (33.91%), Postives = 53/115 (46.09%), Query Frame = 1 Query: 1 LADDTLSVFEPPVRNSGVVGGLFLARGKYKKYIPAIGQCKEGTRLSEKITMDGGLLEAAIGLGGQLSRWLKPTDFLPGSVVTFEMPSSGSKLFTLEVVGHDEYTRKLLEDKASFY 345 L DDTL+VFEP ++NSGV GG FL RG+++K A G S ++ D AA DF G++V FE S LE++ DE T E + + Sbjct: 1002 LEDDTLAVFEPRMKNSGVAGGRFLDRGRFRKCQDAA----HGGTSSRELQKDRSAYRAA--------------DFYVGAIVRFEFSPQQS----LELLAADEQTLSYCESHSESF 1094 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10067.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10067.2.1 >prot_D-mesarthrocarpus_Contig10067.2.1 ID=prot_D-mesarthrocarpus_Contig10067.2.1|Name=mRNA_D-mesarthrocarpus_Contig10067.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=118bp LADDTLSVFEPPVRNSGVVGGLFLARGKYKKYIPAIGQCKEGTRLSEKITback to top mRNA from alignment at D-mesarthrocarpus_Contig10067:1180..2248+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10067.2.1 ID=mRNA_D-mesarthrocarpus_Contig10067.2.1|Name=mRNA_D-mesarthrocarpus_Contig10067.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1069bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10067:1180..2248+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10067:1180..2248+ >mRNA_D-mesarthrocarpus_Contig10067.2.1 ID=mRNA_D-mesarthrocarpus_Contig10067.2.1|Name=mRNA_D-mesarthrocarpus_Contig10067.2.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=354bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10067:1180..2248+ (Discosporangium mesarthrocarpum MT17_79)back to top |