mRNA_D-mesarthrocarpus_Contig10066.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Match: D8LTY7_ECTSI (Malate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTY7_ECTSI) HSP 1 Score: 125 bits (314), Expect = 1.080e-31 Identity = 60/78 (76.92%), Postives = 66/78 (84.62%), Query Frame = 1 Query: 10 RQAVFDSGCLPDFLPETAHIRNDPTWRVAPAPADLQDRRVEITGPV-----INGLNSGASTYMADFEDSSSPTWTSMV 228
RQ FD+G LPDFLPET H+R+DP+WRVA APADL DRRVEITGPV INGLNSGASTYMADFEDSS+PTW +MV
Sbjct: 47 RQKEFDAGVLPDFLPETRHVRDDPSWRVAEAPADLMDRRVEITGPVDRKMVINGLNSGASTYMADFEDSSAPTWVNMV 124
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Match: W3VEN7_PSEA5 (Malate synthase n=2 Tax=Moesziomyces TaxID=63261 RepID=W3VEN7_PSEA5) HSP 1 Score: 114 bits (285), Expect = 1.970e-27 Identity = 55/78 (70.51%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 10 RQAVFDSGCLPDFLPETAHIRNDPTWRVAPAPADLQDRRVEITGPV-----INGLNSGASTYMADFEDSSSPTWTSMV 228
RQA FD G LPDFLPETAHIRN+PTW+ AP L+DRRVEITGPV IN LNSGA TYMADFEDS+SPTW +++
Sbjct: 317 RQARFDGGALPDFLPETAHIRNNPTWQCAPPAPGLRDRRVEITGPVDRKMVINALNSGAYTYMADFEDSTSPTWANLM 394
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Match: A0A081CDG9_PSEA2 (Malate synthase n=1 Tax=Pseudozyma antarctica TaxID=84753 RepID=A0A081CDG9_PSEA2) HSP 1 Score: 114 bits (285), Expect = 1.970e-27 Identity = 55/78 (70.51%), Postives = 62/78 (79.49%), Query Frame = 1 Query: 10 RQAVFDSGCLPDFLPETAHIRNDPTWRVAPAPADLQDRRVEITGPV-----INGLNSGASTYMADFEDSSSPTWTSMV 228
RQA FD G LPDFLPETAHIRN+PTW+ AP L+DRRVEITGPV IN LNSGA TYMADFEDS+SPTW +++
Sbjct: 323 RQARFDGGALPDFLPETAHIRNNPTWQCAPPAPGLRDRRVEITGPVDRKMVINALNSGAYTYMADFEDSTSPTWANLM 400
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Match: I1CBW1_RHIO9 (Malate synthase n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1CBW1_RHIO9) HSP 1 Score: 112 bits (281), Expect = 4.880e-27 Identity = 54/78 (69.23%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 10 RQAVFDSGCLPDFLPETAHIRNDPTWRVAPAPADLQDRRVEITGPV-----INGLNSGASTYMADFEDSSSPTWTSMV 228
RQ D G LPDFLPETAH+RNDP WR AP LQDRRVEITGPV IN LNSGA T+MADFEDSS+PTW +M+
Sbjct: 61 RQQELDRGVLPDFLPETAHVRNDPNWRAAPPAPGLQDRRVEITGPVDRKMVINALNSGAYTFMADFEDSSAPTWENMI 138
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Match: A0A0D1DWV6_USTMA (Malate synthase n=16 Tax=Ustilaginales TaxID=5267 RepID=A0A0D1DWV6_USTMA) HSP 1 Score: 111 bits (277), Expect = 1.580e-26 Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 10 RQAVFDSGCLPDFLPETAHIRNDPTWRVAPAPADLQDRRVEITGPV-----INGLNSGASTYMADFEDSSSPTWTSMV 228
RQA FD G LPDFLPETAHIRN+ TW+ AP L+DRRVEITGPV IN LNSGA TYMADFEDS+SPTW +++
Sbjct: 49 RQARFDGGALPDFLPETAHIRNNATWQCAPPAPGLRDRRVEITGPVDKKMVINALNSGAYTYMADFEDSTSPTWANLM 126
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Match: A0A7C4J6E2_9CHLR (Malate synthase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C4J6E2_9CHLR) HSP 1 Score: 107 bits (268), Expect = 2.050e-26 Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 10 RQAVFDSGCLPDFLPETAHIRNDPTWRVAPAPADLQDRRVEITGP-----VINGLNSGASTYMADFEDSSSPTWTSMVR 231
RQ D+G LPDFLP+TAHIR+D +WRVAP PADLQ R VEITGP +IN LNSGA +MADFED++SPTW +MV+
Sbjct: 53 RQLRIDAGELPDFLPDTAHIRSDRSWRVAPIPADLQRRHVEITGPTDKKMLINALNSGADVFMADFEDANSPTWDNMVQ 131
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Match: A0A8H7BL60_9FUNG (Malate synthase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BL60_9FUNG) HSP 1 Score: 110 bits (276), Expect = 2.410e-26 Identity = 58/79 (73.42%), Postives = 62/79 (78.48%), Query Frame = 1 Query: 10 RQAVFDSGCLPDFLPETAHIRNDPTWRVA-PAPADLQDRRVEITGPV-----INGLNSGASTYMADFEDSSSPTWTSMV 228
RQ D G LPDFLPETA+IRNDP WR A PAP LQDRRVEITGPV IN LNSGAST+MADFEDSSSPTW +M+
Sbjct: 61 RQQELDRGVLPDFLPETAYIRNDPNWRAAVPAPG-LQDRRVEITGPVDRKMVINALNSGASTFMADFEDSSSPTWDNMI 138
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Match: A0A367JLJ1_RHIAZ (Malate synthase n=4 Tax=Rhizopus TaxID=4842 RepID=A0A367JLJ1_RHIAZ) HSP 1 Score: 110 bits (276), Expect = 2.410e-26 Identity = 54/78 (69.23%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 10 RQAVFDSGCLPDFLPETAHIRNDPTWRVAPAPADLQDRRVEITGPV-----INGLNSGASTYMADFEDSSSPTWTSMV 228
RQ D G LPDFLPETA+IRNDP WR AP LQDRRVEITGPV IN LNSGA T+MADFEDSS+PTW +M+
Sbjct: 61 RQQELDRGVLPDFLPETAYIRNDPNWRAAPPAPGLQDRRVEITGPVDRKMIINALNSGAYTFMADFEDSSAPTWENMI 138
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Match: A0A8H8QPZ2_9BASI (Malate synthase n=1 Tax=Ustilago bromivora TaxID=307758 RepID=A0A8H8QPZ2_9BASI) HSP 1 Score: 111 bits (277), Expect = 2.460e-26 Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 10 RQAVFDSGCLPDFLPETAHIRNDPTWRVAPAPADLQDRRVEITGPV-----INGLNSGASTYMADFEDSSSPTWTSMV 228
RQA FD G LPDFLPETAHIRN+ TW+ AP L+DRRVEITGPV IN LNSGA TYMADFEDS+SPTW +++
Sbjct: 49 RQARFDGGALPDFLPETAHIRNNATWQCAPPAPGLRDRRVEITGPVDKKMVINALNSGAYTYMADFEDSTSPTWANLM 126
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Match: A0A836CKH8_9STRA (Malate synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH8_9STRA) HSP 1 Score: 104 bits (259), Expect = 3.970e-26 Identity = 51/78 (65.38%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 10 RQAVFDSGCLPDFLPETAHIRNDPTWRVAPAPADLQDRRVEITGPV-----INGLNSGASTYMADFEDSSSPTWTSMV 228
RQ FD+G P F ET +IR+DP W V P P DL+DRRVEITGPV INGLNSGASTYMADFEDS+SPTW +++
Sbjct: 55 RQCEFDAGIDPCFRAETKYIRDDPAWSVRPPPKDLEDRRVEITGPVDRKMVINGLNSGASTYMADFEDSTSPTWDNVL 132 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10066.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10066.1.1 >prot_D-mesarthrocarpus_Contig10066.1.1 ID=prot_D-mesarthrocarpus_Contig10066.1.1|Name=mRNA_D-mesarthrocarpus_Contig10066.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=100bp MTNRQAVFDSGCLPDFLPETAHIRNDPTWRVAPAPADLQDRRVEITGPVIback to top mRNA from alignment at D-mesarthrocarpus_Contig10066:219..2015- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10066.1.1 ID=mRNA_D-mesarthrocarpus_Contig10066.1.1|Name=mRNA_D-mesarthrocarpus_Contig10066.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=1797bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10066:219..2015- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10066:219..2015- >mRNA_D-mesarthrocarpus_Contig10066.1.1 ID=mRNA_D-mesarthrocarpus_Contig10066.1.1|Name=mRNA_D-mesarthrocarpus_Contig10066.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=300bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10066:219..2015- (Discosporangium mesarthrocarpum MT17_79)back to top |