mRNA_D-mesarthrocarpus_Contig10060.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Match: A0A6H5JEX9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX9_9PHAE) HSP 1 Score: 311 bits (796), Expect = 3.550e-103 Identity = 151/180 (83.89%), Postives = 163/180 (90.56%), Query Frame = 2 Query: 377 VVYPLLITGVAP-SCTVFVGNLSWSTTSEDLRNFMASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRPVHIRLDRKEVEASGGFPVFVGNLPWSTTDEHLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAINDMQSYQIEGRPIQVREDREVGG 913 VV P + G AP S TVFVGNLSW TTSEDLR FM S+GEVVSAEVQSHADSGRSKGWGLVTYA +AEAAIEQLNN D GGRP+HIRLDRKEVEASGGFPVFVGNLPWSTTDE LQ+IF+PYEPYDCHVKTNMAGRSRGFGILRFATPE+GQRAI++MQ+YQI+ RPIQVREDRE+GG Sbjct: 16 VVAPPVAAGAAPVSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGG 195
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Match: D8LK87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK87_ECTSI) HSP 1 Score: 306 bits (785), Expect = 2.040e-99 Identity = 148/179 (82.68%), Postives = 159/179 (88.83%), Query Frame = 2 Query: 377 VVYPLLITGVAPSCTVFVGNLSWSTTSEDLRNFMASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRPVHIRLDRKEVEASGGFPVFVGNLPWSTTDEHLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAINDMQSYQIEGRPIQVREDREVGG 913 VV P S TVFVGNLSW TTSEDLR FM S+GEVVSAEVQSHADSGRSKGWGLVTYA +AEAAIEQLNN D GGRP+HIRLDRKEVEASGGFPVFVGNLPWSTTDE LQ+IF+PYEPYDCHVKTNMAGRSRGFGILRFATPE+GQRAI++MQ+YQI+ RPIQVREDRE+GG Sbjct: 39 VVAPXXXXXXXVSSTVFVGNLSWGTTSEDLRTFMGSLGEVVSAEVQSHADSGRSKGWGLVTYADPAIAEAAIEQLNNADLGGRPIHIRLDRKEVEASGGFPVFVGNLPWSTTDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGG 217
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Match: A0A835ZG94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG94_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.970e-75 Identity = 116/171 (67.84%), Postives = 140/171 (81.87%), Query Frame = 2 Query: 401 GVAPSCTVFVGNLSWSTTSEDLRNFMASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRPVHIRLDRKEVEASGGFPVFVGNLPWSTTDEHLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAINDMQSYQIEGRPIQVREDREVGG 913 G A + TVFVGNL+W+TT+++LR+FMASVG V+S+ VQ HADSGRSKGWGLV Y++ A AAIEQLNN + GGR VH+RLDR ++ SGGF VFVGNLPWSTT E LQ +F+ ++PYD HVKTNMAGRSRGF ILRF+ PE GQ+AI M + I+GRPIQVREDR+VGG Sbjct: 2 GEAGNRTVFVGNLAWNTTADELRDFMASVGTVLSSAVQCHADSGRSKGWGLVEYSTDGEAMAAIEQLNNAELGGRAVHVRLDRSNIDTSGGFAVFVGNLPWSTTTEDLQTLFAQFQPYDVHVKTNMAGRSRGFAILRFSAPEPGQQAIAAMNGFDIDGRPIQVREDRDVGG 172
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Match: A0A835YWJ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWJ3_9STRA) HSP 1 Score: 234 bits (596), Expect = 8.320e-72 Identity = 114/168 (67.86%), Postives = 132/168 (78.57%), Query Frame = 2 Query: 401 GVAPSCTVFVGNLSWSTTSEDLRNFMASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRPVHIRLDRKEVEASGGFPVFVGNLPWSTTDEHLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAINDMQSYQIEGRPIQVREDRE 904 G A + TVFVGNLSW+TTSE+LR+FMAS GE+VS+EVQ HADSGRSKGWGLV Y++ A AAIE LNN D GGR VH+R DR +E SGGF VFVGNLPWS TD L +F+ + P+D HVKTNM GRSRGFGILRF +PE G+ AI M ++IEGR IQVREDRE Sbjct: 2 GEANNRTVFVGNLSWNTTSEELRDFMASQGEIVSSEVQCHADSGRSKGWGLVQYSTPEEATAAIELLNNADLGGRSVHLRFDRTTIETSGGFAVFVGNLPWSVTDLDLTALFAKFNPFDAHVKTNMTGRSRGFGILRFHSPEEGREAIEAMNGFEIEGRHIQVREDRE 169
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Match: A0A7S2V6P6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6P6_9STRA) HSP 1 Score: 207 bits (526), Expect = 2.600e-61 Identity = 100/163 (61.35%), Postives = 120/163 (73.62%), Query Frame = 2 Query: 419 TVFVGNLSWSTTSEDLRNFMASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRPVHIRLDRKEVEASGGFPVFVGNLPWSTTDEHLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAINDMQSYQIEGRPIQVREDREV 907 TVFVGNL WSTT+E+L+ FM+ G VVSA+VQ+HADSGRSKGWGLV Y++A A+ AI+ LN+ R +H+RLDR ++ + G VFVGNLPWSTT E L E+F YEP+D HVKTNMAGRSRGF ILRF + AI DM Y +E R IQVREDR V Sbjct: 7 TVFVGNLKWSTTNEELQEFMSQCGNVVSADVQAHADSGRSKGWGLVEYSTAEEAQNAIQLLNSTTLQERQIHVRLDRSNLDETAGVSVFVGNLPWSTTSETLAELFGSYEPFDVHVKTNMAGRSRGFAILRFNNQDQANAAITDMNGYNLEERNIQVREDRGV 169
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Match: A0A7S2DGC6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DGC6_9STRA) HSP 1 Score: 205 bits (522), Expect = 1.790e-60 Identity = 95/166 (57.23%), Postives = 123/166 (74.10%), Query Frame = 2 Query: 416 CTVFVGNLSWSTTSEDLRNFMASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRPVHIRLDRKEVEASGGFPVFVGNLPWSTTDEHLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAINDMQSYQIEGRPIQVREDREVGG 913 CT+FVGNLSW+TT+E+L FMA+ G V S +VQ+HAD+GRSKGW LVTY +A I+Q N +F GR +++R DR ++E GFPVFVGNLPWSTT E L ++F + P+D HVKT MAGRSRGF ILRF + E+ Q+A M +++EGR I+VREDR+ GG Sbjct: 34 CTLFVGNLSWATTNEELSEFMANYGTVASCQVQAHADTGRSKGWALVTYTTAEECTYTIQQTNGQEFNGRNLNVRQDRSQMEELSGFPVFVGNLPWSTTSEDLSDLFRDFGPFDVHVKTTMAGRSRGFAILRFESLEVAQQATAAMNGHELEGRSIEVREDRQTGG 199
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Match: A0A7S2GAK8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GAK8_9STRA) HSP 1 Score: 200 bits (508), Expect = 1.140e-58 Identity = 97/166 (58.43%), Postives = 122/166 (73.49%), Query Frame = 2 Query: 404 VAPSCTVFVGNLSWSTTSEDLRNFMASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRPVHIRLDRKEVEASGGFPVFVGNLPWSTTDEHLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAINDMQSYQIEGRPIQVREDR 901 V + T+FVGNL+WSTTSEDL+ + A+VG V+S EVQSHAD+GRSKGW LVTY+++ A AI QL+ DF RP+++R+DR VE GG VFVGNLPWSTT+E L E+F + P+D +VKT M GRSRGF I+RF TPE + AI MQ + EGR + VR DR Sbjct: 19 VPSTATLFVGNLAWSTTSEDLKKYCAAVGNVLSVEVQSHADTGRSKGWALVTYSTSEEAAVAITQLHGHDFNDRPLNVRVDRSNVEQMGGTLVFVGNLPWSTTNEQLLELFGQFNPFDVNVKTTMNGRSRGFAIVRFDTPERAEVAIGTMQGFIFEGRTLDVRIDR 184
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Match: A0A6U4FSY9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FSY9_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.140e-54 Identity = 85/160 (53.12%), Postives = 112/160 (70.00%), Query Frame = 2 Query: 422 VFVGNLSWSTTSEDLRNFMASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRPVHIRLDRKEVEASGGFPVFVGNLPWSTTDEHLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAINDMQSYQIEGRPIQVREDR 901 +++GNL+W TT E+L F+ SVGEV++A VQ HADS RSKGWGL TYA+ A A+ QL+ + GRPVH+R DR ++E GG +FVGN+PW T E L E F P++P D HVKTNMAGRSRGF I +F E+ A+ M +++GR +QVRED+ Sbjct: 6 IYIGNLTWDTTDEELLEFLGSVGEVLNASVQRHADSQRSKGWGLATYAAPEGAALAVSQLDQSELKGRPVHVRFDRSKIENVGGVNIFVGNIPWEITSEQLYESFFPFQPIDVHVKTNMAGRSRGFAIAKFPNQELADAAVAQMNGKELQGRQLQVREDK 165
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Match: K8YWK2_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWK2_NANGC) HSP 1 Score: 178 bits (452), Expect = 3.920e-51 Identity = 87/163 (53.37%), Postives = 111/163 (68.10%), Query Frame = 2 Query: 413 SCTVFVGNLSWSTTSEDLRNFMASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRPVHIRLDRKEVEASGGFPVFVGNLPWSTTDEHLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAINDMQSYQIEGRPIQVREDR 901 S TVFVGNLSW TT++ L M + G V+ EVQ+H+D+GRSKGW LVT+ +A A A+E L + GRP+++R DR E+E GF VFVGNLPW T L+ +FS + PYD H+KTNM+GRSRGFG+LRF + E QRAI M ++ R I VR DR Sbjct: 2 SKTVFVGNLSWGTTADSLTAIMETAGRVLGVEVQAHSDTGRSKGWALVTFETAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 164
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Match: A0A4D9CR95_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR95_9STRA) HSP 1 Score: 153 bits (387), Expect = 4.030e-40 Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 2 Query: 476 MASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRPVHIRLDRKEVEASGGFPVFVGNLPWSTTDEHLQEIFSPYEPYDCHVKTNMAGRSRGFGILRFATPEMGQRAINDMQSYQIEGRPIQVREDR 901 M + G V+ EVQ+H+D+GRSKGW LVT+ +A A A+E L + GRP+++R DR E+E GF VFVGNLPW T L+ +FS + PYD H+KTNM+GRSRGFG+LRF + E QRAI M ++ R I VR DR Sbjct: 1 METAGRVLDVEVQAHSDTGRSKGWALVTFEAAEDASRAMELLCGREVEGRPLYVREDRTEIEKEEGFVVFVGNLPWDMTASGLRTVFSEFRPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDR 142 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10060.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10060.1.1 >prot_D-mesarthrocarpus_Contig10060.1.1 ID=prot_D-mesarthrocarpus_Contig10060.1.1|Name=mRNA_D-mesarthrocarpus_Contig10060.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=182bp MASVGEVVSAEVQSHADSGRSKGWGLVTYASATMAEAAIEQLNNVDFGGRback to top mRNA from alignment at D-mesarthrocarpus_Contig10060:107..2751- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10060.1.1 ID=mRNA_D-mesarthrocarpus_Contig10060.1.1|Name=mRNA_D-mesarthrocarpus_Contig10060.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=2645bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10060:107..2751- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10060:107..2751- >mRNA_D-mesarthrocarpus_Contig10060.1.1 ID=mRNA_D-mesarthrocarpus_Contig10060.1.1|Name=mRNA_D-mesarthrocarpus_Contig10060.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=546bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10060:107..2751- (Discosporangium mesarthrocarpum MT17_79)back to top |