mRNA_D-mesarthrocarpus_Contig1006.6.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 1.450e-9 Identity = 47/129 (36.43%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 22 TRYMSLAAVAWPRM-MCNGVWFDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVTVNGERHKKDMVEEIIPSIMAIAPRLPGHLIFMKQHGAKLHVREGGHGGNP-----GCSKRW--QSLDQPVNSPD 384 T+ M L AVA PR + +DGKV ++ LAK +K+R++GTPVT P+TV +++ +V+++IP+I A P G I+++Q AK HV +P G + W Q + QP SPD Sbjct: 206 TKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVD----DPEVLAAGRKEGWNIQLMAQPAQSPD 330
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 8.570e-9 Identity = 36/96 (37.50%), Postives = 60/96 (62.50%), Query Frame = 1 Query: 22 TRYMSLAAVAWPRM-MCNGVWFDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVTVNGERHKKDMVEEIIPSIMAIAPRLPGHLIFMKQHGAKLHV 306 T+ M L AVA PR V +DGK+ I++ +A +K+R++GTPVT P+TV +++ +V+++IP+I A P G I+++Q+ A+ HV Sbjct: 139 TKVMFLCAVARPRFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPHV 234
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 9.140e-9 Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 25 RYMSLAAVAWPRM--MCNGVWFDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVTVNGERHKKDMVEEIIPSIMAIAPRLPGHLIFMKQHGAKLHVREGGHGGN-PGCSKRW--QSLDQPVNSPD 384 + M L AVA PR +W DGK+ + ++ A+ +K+RE+GTPVT PVTV + +++ ++E +IP+I + P H I+++Q A+ HV G S W Q + QP SPD Sbjct: 207 KVMFLTAVARPRYDYTQRRMW-DGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVDDAAVTLAGHSDGWSIQLVAQPAMSPD 330
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Match: A0A485LM91_9STRA (Aste57867_22590 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LM91_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 5.130e-8 Identity = 41/125 (32.80%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 25 RYMSLAAVAWPRM--MCNGVWFDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVTVNGERHKKDMVEEIIPSIMAIAPRLPGHLIFMKQHGAKLHVR-EGGHGGNPGCSKRW--QSLDQPVNSPD 384 + M L AVA PR +W DGK+ + ++ A+ +K+R++G PVT PVTV +++ +++ +IP+IM + P + I+++Q A+ HV + GC W Q + QP SPD Sbjct: 89 KVMFLTAVARPRYDYKSRTMW-DGKIGMWPFVSVVPAQRKSKNRDRGMPVTTPVTVTKPVYREYLLKHVIPAIMKVWPGRRSNPIYIQQDNARPHVEVDDADVKMAGCLDGWSIQLVAQPAMSPD 212
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Match: A0A6G0WL62_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WL62_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 6.610e-8 Identity = 41/123 (33.33%), Postives = 66/123 (53.66%), Query Frame = 1 Query: 31 MSLAAVAWPRM--MCNGVWFDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVTVNGERHKKDMVEEIIPSIMAIAPRLPGHLIFMKQHGAKLHVREGGHGG-NPGCSKRW--QSLDQPVNSPD 384 M L AVA PR +W +GK+ + ++ A+ +K+RE+GTPVT P+TV + +++ ++E +IP+I + P I+++Q A+ H G G S+ W Q QP SPD Sbjct: 2 MFLTAVARPRYDYTLRKLW-NGKIGMWPFVSVVPAQRKSKNRERGTPVTTPITVTKKVYRQYLLEHVIPTIKKVWPGRRSQAIYIQQDNARPHDEVDGPAVLMAGSSEGWTIQLASQPAMSPD 123
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Match: A0A024TSN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSN5_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.890e-7 Identity = 37/101 (36.63%), Postives = 57/101 (56.44%), Query Frame = 1 Query: 22 TRYMSLAAVAWPR----MMCNGVWFDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVTVNGERHKKDMVEEIIPSIMAIAPRLPGHLIFMKQHGAKLHVRE 312 T+ M L AVA PR + +W DGKV ++ LAK K+R++GTPVT P++V ++ ++++++ +I A P G IF +Q AK HV E Sbjct: 171 TKVMFLCAVARPRPRHDSKRHAMW-DGKVGLWPFVETKLAKRKYKNRDRGTPVTVPISVTKPIYRYNLIDKVFSAIQAKWPDRRGRPIFAQQDNAKPHVAE 270
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Match: A0A6A4Z1S9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z1S9_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 3.560e-7 Identity = 40/124 (32.26%), Postives = 63/124 (50.81%), Query Frame = 1 Query: 25 RYMSLAAVAWPRM-MCNGVWFDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVTVNGERHKKDMVEEIIPSIMAIAPRLPGHLIFMKQHGAKLHVREGGHGGN-PGCSKRWQS--LDQPVNSPD 384 + M L AVA PR +DGK+ + ++ A+ +K+R++GTPVT PVTV ++ ++ +IP I A+ P I+++Q A+ HV GC+ W + QP SPD Sbjct: 207 KVMFLTAVARPRFDYTTRTMWDGKIGMWPFVSVVPARRKSKNRDRGTPVTTPVTVTKPVYRDYLLTHVIPRIKAVWPGRRSDPIYIQQDNARPHVEVDDPAVTMAGCADGWSIHLVAQPPMSPD 330
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Match: A0A024USS9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024USS9_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 3.140e-6 Identity = 33/97 (34.02%), Postives = 55/97 (56.70%), Query Frame = 1 Query: 22 TRYMSLAAVAWPR--MMCNGVWFDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVTVNGERHKKDMVEEIIPSIMAIAPRLPGHLIFMKQHGAKLHV 306 T+ M L AVA PR + +W DGK ++ LAK +K+R++GTPVT P++V + +++++ P+I + P G IF++Q K H+ Sbjct: 134 TKVMFLCAVARPRHDSQRHAMW-DGKAGLWPFVETKLAKRKSKNRDRGTPVTVPMSVTKPIYSNYLIDKVFPAIQSKWPDRRGRPIFVQQDNTKPHL 229
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Match: A0A024T7J2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T7J2_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 9.060e-6 Identity = 30/83 (36.14%), Postives = 49/83 (59.04%), Query Frame = 1 Query: 58 RMMCNGVWFDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVTVNGERHKKDMVEEIIPSIMAIAPRLPGHLIFMKQHGAKLHV 306 R+ +W DGK+ T ++ AK +K+RE+GTPVT PVTV +++ ++E + P+I A P I+++Q A+ HV Sbjct: 98 RLWTAHLW-DGKLGTWAFVETQSAKRTSKNRERGTPVTTPVTVTKPLYRRYLLEHVFPAIRAQWPGPRSKPIYVQQDNARPHV 179
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Match: A0A6A4Z4C8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z4C8_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 2.220e-5 Identity = 26/75 (34.67%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 82 FDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVTVNGERHKKDMVEEIIPSIMAIAPRLPGHLIFMKQHGAKLHV 306 +DGKV ++++ AK +K+R++GTP+T P+TV +++ +V+++IP+ A P +F++Q AK HV Sbjct: 2 WDGKVGLWPFVEVVPAKRRSKNRDRGTPITTPMTVTKPVYRQYLVDKVIPATQAQWPSNRRGPVFIQQDNAKPHV 76 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig1006.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig1006.6.1 >prot_D-mesarthrocarpus_Contig1006.6.1 ID=prot_D-mesarthrocarpus_Contig1006.6.1|Name=mRNA_D-mesarthrocarpus_Contig1006.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=139bp MSLAAVAWPRMMCNGVWFDGKVSTRTIMDILLAKWDTKHREKGTPVTKPVback to top mRNA from alignment at D-mesarthrocarpus_Contig1006:22187..22676- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig1006.6.1 ID=mRNA_D-mesarthrocarpus_Contig1006.6.1|Name=mRNA_D-mesarthrocarpus_Contig1006.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=490bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1006:22187..22676- (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig1006:22187..22676- >mRNA_D-mesarthrocarpus_Contig1006.6.1 ID=mRNA_D-mesarthrocarpus_Contig1006.6.1|Name=mRNA_D-mesarthrocarpus_Contig1006.6.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=417bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig1006:22187..22676- (Discosporangium mesarthrocarpum MT17_79)back to top |