mRNA_D-mesarthrocarpus_Contig10058.1.1 (mRNA) Discosporangium mesarthrocarpum MT17_79
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_D-mesarthrocarpus_Contig10058.1.1 vs. uniprot
Match: D8LEM5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM5_ECTSI) HSP 1 Score: 352 bits (903), Expect = 1.280e-102 Identity = 301/805 (37.39%), Postives = 382/805 (47.45%), Query Frame = 1 Query: 130 RVSRDSIIHAIFQALFGKRRVRSGPRERYGGDWDEVEEDVDGEGD----EVDESWIKNGLNLSLFSSQAVDFACRSTAGADLLNEYVDSNAVFRMVSDLRFEDSRVPSPRLMVLKAIYENCPHLRVPTLRALAHASYNHLQRLRELEDWAPRAGIDTARAVLAA--SGHPGVPEGALSTGSGAGGGGNIQAAGRDQAQTLLELLIYSLDTLPAFFLGAQPPPAVQGEQEEGVWGPGENLDHHLGEHP----VVDGGVTGMPVQGPFGAVGSGGEGMGVVGHSQETPWL--PYMYPGEEGREGGGPGAGEV------------GAGAAAIFSEESTCPLPGYGVSEKQGVR-GQVTSVLGNALQEADEEVEQPAWAEVEAEAVVGEAVGGGAGGGNKTDAWTTPVKVDIAALTSTGDNSSPSTGSNAPLIGGTAHDEGDSSDTDTQSLESPGLPSSPAWAVEGSRYLARGTLEQEXXXXXXXGNSS-----LDHSLRVGTWALDAGGGRSREIQGSRVSTAGDPWSPLGQTRASSRTSTTARTLTFLASPESRPRQPNIEGAEGK---GGADAVKVSPAAAGVGVGDIVTGHEGEDGSFQVDAPGGPADDTAAAPPPLTVYPDPNPATPGVRSFEP----DATAAGGTDMPAMHGYVAGTWPPGPVGE-------------------VVKLATRSLCTLYTCHGAASGGGGAGNRPD----LGMLGAAGHTLCALWPPVAVELARRLLGGWPTGSAYREVAYLRLLSGVLCAVLPVGIGFCQGAESMPRRLVQRLAASVRSTNVKV 2364
R+SRDSI+HAIFQ+LFGKR+VRSGPRERYGGDWD+V++ EVDESWIK G+NL+LF+SQAVDFACRSTAGADLL++YVDSNAVFR+V+DLRFED RVPSPRLM++KA+YENC HLR+ TLRALAHAS++HL R RELEDWA R G+D A A AA G G G + GRDQ+QTL ELL++ L T P FFLG P G+Q+ GVW G+ G+ V D GV +G VG GV G + + P G G G P + E+ G AAA C G + G G+ ++G+ P A + GG+ A + + +L S GS +P G ++EG + + P P SPAWA G R + LE+ G+ + + W +AG G E G + TA D G A AR L F A E + G G G + + SP A+ G + G E G+ ++ P A + P + + EP D + G+ A G AGT P P +K ATRSLC LY HGA + G A D L L AG TLC LWPP + L RRLLG WP GSA REVAYLRL++GV CA P+G+ C G+ +P L +RLA + S+N KV
Sbjct: 398 RLSRDSIVHAIFQSLFGKRKVRSGPRERYGGDWDDVDDXXXXXXXXXXXEVDESWIKTGINLTLFNSQAVDFACRSTAGADLLHQYVDSNAVFRLVTDLRFEDPRVPSPRLMIIKAVYENCAHLRLLTLRALAHASHDHLMRTRELEDWAARVGVDIAEAAAAAVADGISGXXXXXXXXXX-----GRARVTGRDQSQTLGELLLFVLQTFPRFFLGMVPVDEAGGQQQ-GVWHHGDPGATFSGDGSGYGCVEDCGVAAQAAEG-CADVGGVDVHAGVCGGNASSSGFVSPSQAWGSNGPGIGSPSSAEITENRRAAGDQEDGPAAAAAADGGDQCKSGCDGCDDNDGASLGEEGGLVGSPGXXXXXXXXXPT------------ARNAASSGGDPAPA-SERCALAWPSLAS---------GSPSPATGQRQNEEG------VGNKQEP--PWSPAWATAGVRSIEDVPLEEGAGLAVNRGSCGDGVWGQGMASKDLAWESEAGLG---EEVGGDLRTATD-----GVAGA-------ARALRFTAQEEDVGGDAEVTGDAGNWLASGRECSRESPVAS---AGAALAGDPFESGAGRLGLDEWPTAQEAKSSTPEKIS-----------AVEPVERMDGASVSGSRGDATGGQEAGTQQPLPSATGCTAAGGGGLALELDLPAVALKEATRSLCNLYASHGAPAAGAEAAASADAPERLQPLALAGSTLCQLWPPSSALLLRRLLGTWPAGSARREVAYLRLIAGVACAAPPLGV-VCPGSR-LPLMLFRRLAKCINSSNTKV 1134
BLAST of mRNA_D-mesarthrocarpus_Contig10058.1.1 vs. uniprot
Match: A0A836CPM9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPM9_9STRA) HSP 1 Score: 157 bits (396), Expect = 2.070e-36 Identity = 92/210 (43.81%), Postives = 120/210 (57.14%), Query Frame = 1 Query: 133 VSRDSIIHAIFQALFGKRRVRSGPRERYGGDWDEVEEDVDGEGDE-----VDESWIKNGLNLSLFSSQAVDFACRSTAGADLLNEYVDSNAVFRMVSDLRFEDSRVPSPRLMVLKAIYENCPHLRVPTLRALAHASYNHLQRLRELEDWAPRAGIDTARAVLAASGHPGVPEGALSTGSGAGGGGNIQAAGRDQAQTLLELLIYSLDTLP 747
+SRDSI+HAIF+ALFG+R+VR GPRE YGG WDE ++D D + VDESWIK+ +++SLFSS+A+ FA S GADLL+ YVD++AV R+V LR +D RVPSPRL +L+A++E+C HLR+P LRA A A RDQ QTLLELL+Y L+ +P
Sbjct: 216 LSRDSIVHAIFEALFGRRQVRRGPRESYGGAWDESDDDGDDPAADAPDAVVDESWIKSSMDVSLFSSKALQFAVSSVRGADLLSRYVDADAVSRLVDALRRDDPRVPSPRLAILRAVHEHCRHLRLPMLRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------XXGAARDQGQTLLELLLYLLEHMP 404
BLAST of mRNA_D-mesarthrocarpus_Contig10058.1.1 vs. uniprot
Match: M4BW79_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BW79_HYAAE) HSP 1 Score: 70.1 bits (170), Expect = 1.090e-8 Identity = 60/172 (34.88%), Postives = 87/172 (50.58%), Query Frame = 1 Query: 121 PGGRVSRDSIIHAIFQALFGKRRV--RSGPRERYGGDWDEVEEDVDGEGDEVDESWIKNGLNLSLFSSQ-------AVDFACRSTAGADLLNEYVDSNAVFRMVSDLRFEDSRVPSPRLMVLKAIYENCPHLRVPTLRALAHASYNHLQRLRELEDWAPRAGID-TARAVLA 606
P SRD +I IF ALF +R R PR+ DE + DE +E +K GL +LF SQ ++ A A AD L + + +V+ LRFED RV S RL +L+AI+++CP RV +RALA A+ ++ + + A G++ T+R V A
Sbjct: 238 PQRVASRDDVIDTIFTALFCRRDEGRRRRPRQALSAFGDEGTDT-----DEPNEELVKQGLATALFKSQLQLHAPSSLSTAASPAAAADSL---LTPTFLHALVNALRFEDFRVASVRLDILRAIHKSCPTKRVHLVRALADATALRIEYVTAVAARAEALGVEKTSRQVTA 401
BLAST of mRNA_D-mesarthrocarpus_Contig10058.1.1 vs. uniprot
Match: A0A812UKS3_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UKS3_SYMMI) HSP 1 Score: 62.4 bits (150), Expect = 1.530e-6 Identity = 40/115 (34.78%), Postives = 57/115 (49.57%), Query Frame = 1 Query: 262 DEVDESWIKNGLNLSLFSSQAVDFACRSTAGAD-------LLNEYVDSNAVFRMVSDLRFEDSRVPSPRLMVLKAIYENCPHLRVPTLRALAHASYNHLQRLRELEDWAPRAGID 585
D VDESW ++ L S++A+ +A + AD LL+EY+ + + ++ L FED RV SP + VLKA+ NC LR L SY L R + +A ID
Sbjct: 17 DPVDESWFNKLVSTCLLSTKALQYALQKNIPADTSLPPNELLSEYLQQSFLTSLLDQLPFEDERVSSPIVSVLKAVCRNCACLRQFLADGLKQVSYLRLLRCKSSSRFAVHFEID 131
BLAST of mRNA_D-mesarthrocarpus_Contig10058.1.1 vs. uniprot
Match: A0A484E4T9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4T9_BRELC) HSP 1 Score: 60.5 bits (145), Expect = 1.050e-5 Identity = 48/160 (30.00%), Postives = 78/160 (48.75%), Query Frame = 1 Query: 121 PGGRVSRDSIIHAIFQALF-GKRRVRSGPRERYGGDWDEVEEDVDGEGDEVDESWIKNGLNLSLFSSQA----VDFACRSTAGADLLNEYVDSNAVFRMVSDLRFEDSRVPSPRLMVLKAIYENCPHLRVPTLRALAHASYNHLQRLRELEDWAPRAGID 585
P SRD +I+ IF+ALF G + + PR+ D+ D D E +E ++K GL +LF Q ++ A + ++ + +++ LRFED RV S RL +L+AI + R+ RALA A L+ ++ +E A G++
Sbjct: 221 PQRVASRDDVINTIFKALFTGSKGKCNRPRQVLSAFGDDTGTDTD----EPNEDFVKRGLASALFKDQLNLHMPSSLSKAVIPAVAADNFITPKFMHALMNALRFEDFRVASARLEILRAIRKTFSTKRLHLSRALADAIALRLEYVQSIETRAQTLGVE 376 The following BLAST results are available for this feature:
BLAST of mRNA_D-mesarthrocarpus_Contig10058.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-mesarthrocarpus_Contig10058.1.1 >prot_D-mesarthrocarpus_Contig10058.1.1 ID=prot_D-mesarthrocarpus_Contig10058.1.1|Name=mRNA_D-mesarthrocarpus_Contig10058.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=polypeptide|length=790bp MHDLPLPPAVLPPPPPPPHTKIYIDVYNTYTCMFVRVMFWPGGRVSRDSIback to top mRNA from alignment at D-mesarthrocarpus_Contig10058:36..3775+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-mesarthrocarpus_Contig10058.1.1 ID=mRNA_D-mesarthrocarpus_Contig10058.1.1|Name=mRNA_D-mesarthrocarpus_Contig10058.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=mRNA|length=3740bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10058:36..3775+ (Discosporangium mesarthrocarpum MT17_79)back to top Coding sequence (CDS) from alignment at D-mesarthrocarpus_Contig10058:36..3775+ >mRNA_D-mesarthrocarpus_Contig10058.1.1 ID=mRNA_D-mesarthrocarpus_Contig10058.1.1|Name=mRNA_D-mesarthrocarpus_Contig10058.1.1|organism=Discosporangium mesarthrocarpum MT17_79|type=CDS|length=2370bp|location=Sequence derived from alignment at D-mesarthrocarpus_Contig10058:36..3775+ (Discosporangium mesarthrocarpum MT17_79)back to top |